EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000008641 (Gene tree)
Gene ID: 100348757
Gene Symbol: PUM1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 151543 bases
Position: chr13:135109987-135261529
Accession: 100348757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000007472	PUF	PF00806.19	1.1e-69	1	8
ENSOCUP00000007472	PUF	PF00806.19	1.1e-69	2	8
ENSOCUP00000007472	PUF	PF00806.19	1.1e-69	3	8
ENSOCUP00000007472	PUF	PF00806.19	1.1e-69	4	8
ENSOCUP00000007472	PUF	PF00806.19	1.1e-69	5	8
ENSOCUP00000007472	PUF	PF00806.19	1.1e-69	6	8
ENSOCUP00000007472	PUF	PF00806.19	1.1e-69	7	8
ENSOCUP00000007472	PUF	PF00806.19	1.1e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000008647	PUM1-201	4632	XM_002716062	ENSOCUP00000007472	1191 (aa)	XP_002716108	G1SVK9

Gene Model

Click here to download ENSOCUG00000008641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000008641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000008641	PUM1	89	77.332	ENSOCUG00000017908	PUM2	99	77.332

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000008641	PUM1	99	98.989	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSOCUG00000008641	PUM1	89	91.727	ENSAPOG00000021632	pum1	99	91.241	Acanthochromis_polyacanthus
ENSOCUG00000008641	PUM1	99	98.655	ENSAMEG00000017656	PUM1	97	98.655	Ailuropoda_melanoleuca
ENSOCUG00000008641	PUM1	99	74.542	ENSACIG00000021013	pum1	99	76.471	Amphilophus_citrinellus
ENSOCUG00000008641	PUM1	89	91.727	ENSAOCG00000003944	pum1	99	77.626	Amphiprion_ocellaris
ENSOCUG00000008641	PUM1	89	91.727	ENSAPEG00000014550	pum1	99	77.626	Amphiprion_percula
ENSOCUG00000008641	PUM1	89	88.631	ENSATEG00000016004	pum1	99	91.241	Anabas_testudineus
ENSOCUG00000008641	PUM1	99	97.056	ENSAPLG00000009351	PUM1	100	97.056	Anas_platyrhynchos
ENSOCUG00000008641	PUM1	99	95.206	ENSACAG00000000682	PUM1	98	95.122	Anolis_carolinensis
ENSOCUG00000008641	PUM1	99	98.989	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSOCUG00000008641	PUM1	89	76.531	ENSACLG00000019354	pum1	99	78.889	Astatotilapia_calliptera
ENSOCUG00000008641	PUM1	99	78.494	ENSAMXG00000020607	pum1	96	78.912	Astyanax_mexicanus
ENSOCUG00000008641	PUM1	99	98.905	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSOCUG00000008641	PUM1	99	98.991	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSOCUG00000008641	PUM1	99	96.468	ENSCAFG00000011205	PUM1	100	96.468	Canis_familiaris
ENSOCUG00000008641	PUM1	92	96.542	ENSCAFG00020024616	PUM1	99	97.913	Canis_lupus_dingo
ENSOCUG00000008641	PUM1	99	98.905	ENSCHIG00000012952	PUM1	100	98.905	Capra_hircus
ENSOCUG00000008641	PUM1	99	98.570	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSOCUG00000008641	PUM1	99	98.654	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSOCUG00000008641	PUM1	99	96.552	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSOCUG00000008641	PUM1	99	98.738	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSOCUG00000008641	PUM1	99	98.000	ENSCSAG00000001028	PUM1	100	98.000	Chlorocebus_sabaeus
ENSOCUG00000008641	PUM1	93	95.977	ENSCHOG00000010245	PUM1	93	95.977	Choloepus_hoffmanni
ENSOCUG00000008641	PUM1	99	96.972	ENSCPBG00000009288	PUM1	100	97.573	Chrysemys_picta_bellii
ENSOCUG00000008641	PUM1	99	98.823	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSOCUG00000008641	PUM1	99	98.736	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSOCUG00000008641	PUM1	99	98.736	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSOCUG00000008641	PUM1	89	76.301	ENSCSEG00000015981	pum1	99	77.994	Cynoglossus_semilaevis
ENSOCUG00000008641	PUM1	99	73.737	ENSCVAG00000007043	pum1	99	75.682	Cyprinodon_variegatus
ENSOCUG00000008641	PUM1	99	79.079	ENSDARG00000099256	pum1	99	79.331	Danio_rerio
ENSOCUG00000008641	PUM1	99	98.318	ENSDNOG00000010939	PUM1	100	98.318	Dasypus_novemcinctus
ENSOCUG00000008641	PUM1	85	99.029	ENSDORG00000001875	Pum1	100	99.029	Dipodomys_ordii
ENSOCUG00000008641	PUM1	88	93.463	ENSETEG00000004355	PUM1	87	93.463	Echinops_telfairi
ENSOCUG00000008641	PUM1	99	98.738	ENSEASG00005010813	PUM1	100	98.738	Equus_asinus_asinus
ENSOCUG00000008641	PUM1	99	98.738	ENSECAG00000021369	PUM1	100	98.738	Equus_caballus
ENSOCUG00000008641	PUM1	76	99.387	ENSEEUG00000003871	PUM1	74	99.387	Erinaceus_europaeus
ENSOCUG00000008641	PUM1	99	76.277	ENSELUG00000002409	pum1	99	83.975	Esox_lucius
ENSOCUG00000008641	PUM1	99	98.907	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSOCUG00000008641	PUM1	99	95.561	ENSFALG00000001214	PUM1	97	94.556	Ficedula_albicollis
ENSOCUG00000008641	PUM1	99	98.654	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSOCUG00000008641	PUM1	99	97.225	ENSGALG00000042598	PUM1	100	97.225	Gallus_gallus
ENSOCUG00000008641	PUM1	89	87.935	ENSGAFG00000015617	pum1	99	81.741	Gambusia_affinis
ENSOCUG00000008641	PUM1	99	74.711	ENSGACG00000005717	pum1	99	76.320	Gasterosteus_aculeatus
ENSOCUG00000008641	PUM1	99	96.804	ENSGAGG00000001290	PUM1	100	96.804	Gopherus_agassizii
ENSOCUG00000008641	PUM1	99	98.823	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSOCUG00000008641	PUM1	99	74.234	ENSHBUG00000018718	pum1	99	76.261	Haplochromis_burtoni
ENSOCUG00000008641	PUM1	99	98.486	ENSHGLG00000013819	Pum1	100	98.611	Heterocephalus_glaber_female
ENSOCUG00000008641	PUM1	99	98.486	ENSHGLG00100008621	Pum1	100	98.611	Heterocephalus_glaber_male
ENSOCUG00000008641	PUM1	99	76.936	ENSIPUG00000020421	pum1	99	77.787	Ictalurus_punctatus
ENSOCUG00000008641	PUM1	99	98.991	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSOCUG00000008641	PUM1	99	98.570	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSOCUG00000008641	PUM1	99	73.902	ENSKMAG00000003481	pum1	99	75.848	Kryptolebias_marmoratus
ENSOCUG00000008641	PUM1	99	73.610	ENSLBEG00000002527	pum1	99	75.808	Labrus_bergylta
ENSOCUG00000008641	PUM1	99	86.178	ENSLACG00000017188	PUM1	99	86.345	Latimeria_chalumnae
ENSOCUG00000008641	PUM1	99	87.876	ENSLOCG00000005210	pum1	99	88.043	Lepisosteus_oculatus
ENSOCUG00000008641	PUM1	99	98.234	ENSLAFG00000003178	PUM1	100	98.234	Loxodonta_africana
ENSOCUG00000008641	PUM1	99	98.821	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSOCUG00000008641	PUM1	99	98.575	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSOCUG00000008641	PUM1	99	98.823	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSOCUG00000008641	PUM1	99	98.823	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSOCUG00000008641	PUM1	99	74.316	ENSMAMG00000011606	pum1	99	76.344	Mastacembelus_armatus
ENSOCUG00000008641	PUM1	99	74.234	ENSMZEG00005005834	pum1	99	76.261	Maylandia_zebra
ENSOCUG00000008641	PUM1	99	96.972	ENSMGAG00000000724	PUM1	100	96.972	Meleagris_gallopavo
ENSOCUG00000008641	PUM1	99	98.738	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSOCUG00000008641	PUM1	99	98.738	ENSMICG00000007713	-	100	99.306	Microcebus_murinus
ENSOCUG00000008641	PUM1	99	96.878	ENSMICG00000012213	-	99	96.878	Microcebus_murinus
ENSOCUG00000008641	PUM1	99	98.486	ENSMOCG00000015463	Pum1	100	98.611	Microtus_ochrogaster
ENSOCUG00000008641	PUM1	89	88.399	ENSMMOG00000019817	pum1	99	90.998	Mola_mola
ENSOCUG00000008641	PUM1	99	97.061	ENSMODG00000017067	PUM1	100	97.061	Monodelphis_domestica
ENSOCUG00000008641	PUM1	89	88.631	ENSMALG00000016399	pum1	99	91.241	Monopterus_albus
ENSOCUG00000008641	PUM1	99	98.315	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSOCUG00000008641	PUM1	99	98.568	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSOCUG00000008641	PUM1	99	98.399	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSOCUG00000008641	PUM1	99	98.484	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSOCUG00000008641	PUM1	99	98.318	ENSMPUG00000015454	PUM1	100	98.318	Mustela_putorius_furo
ENSOCUG00000008641	PUM1	99	98.652	ENSMLUG00000006490	PUM1	100	98.652	Myotis_lucifugus
ENSOCUG00000008641	PUM1	99	98.823	ENSNGAG00000002378	Pum1	100	99.002	Nannospalax_galili
ENSOCUG00000008641	PUM1	79	81.366	ENSNBRG00000010689	pum1	99	83.643	Neolamprologus_brichardi
ENSOCUG00000008641	PUM1	99	97.477	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSOCUG00000008641	PUM1	84	96.284	ENSMEUG00000000976	-	82	96.284	Notamacropus_eugenii
ENSOCUG00000008641	PUM1	83	99.606	ENSOPRG00000001776	PUM1	72	99.606	Ochotona_princeps
ENSOCUG00000008641	PUM1	99	98.486	ENSODEG00000003465	PUM1	100	98.611	Octodon_degus
ENSOCUG00000008641	PUM1	99	74.815	ENSONIG00000002290	pum1	99	76.592	Oreochromis_niloticus
ENSOCUG00000008641	PUM1	81	77.961	ENSOANG00000004902	-	100	77.961	Ornithorhynchus_anatinus
ENSOCUG00000008641	PUM1	99	74.732	ENSORLG00000011482	pum1	99	76.010	Oryzias_latipes
ENSOCUG00000008641	PUM1	99	74.814	ENSORLG00020019461	pum1	99	76.010	Oryzias_latipes_hni
ENSOCUG00000008641	PUM1	99	74.814	ENSORLG00015011375	pum1	99	76.092	Oryzias_latipes_hsok
ENSOCUG00000008641	PUM1	89	92.944	ENSOMEG00000009312	pum1	99	77.043	Oryzias_melastigma
ENSOCUG00000008641	PUM1	99	95.886	ENSOGAG00000011063	PUM1	100	95.886	Otolemur_garnettii
ENSOCUG00000008641	PUM1	99	97.897	ENSOARG00000001899	PUM1	100	98.544	Ovis_aries
ENSOCUG00000008641	PUM1	99	98.823	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSOCUG00000008641	PUM1	99	98.823	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSOCUG00000008641	PUM1	99	98.654	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSOCUG00000008641	PUM1	99	98.823	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSOCUG00000008641	PUM1	99	98.823	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSOCUG00000008641	PUM1	99	78.045	ENSPKIG00000010578	pum1	99	77.704	Paramormyrops_kingsleyae
ENSOCUG00000008641	PUM1	99	97.225	ENSPSIG00000014118	PUM1	100	97.225	Pelodiscus_sinensis
ENSOCUG00000008641	PUM1	79	79.705	ENSPMGG00000005836	pum1	99	82.086	Periophthalmus_magnuspinnatus
ENSOCUG00000008641	PUM1	99	98.654	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSOCUG00000008641	PUM1	99	97.061	ENSPCIG00000014151	PUM1	100	97.061	Phascolarctos_cinereus
ENSOCUG00000008641	PUM1	94	77.281	ENSPFOG00000007289	pum1	99	82.209	Poecilia_formosa
ENSOCUG00000008641	PUM1	99	73.269	ENSPLAG00000007256	pum1	99	78.112	Poecilia_latipinna
ENSOCUG00000008641	PUM1	89	77.306	ENSPMEG00000019543	pum1	99	78.269	Poecilia_mexicana
ENSOCUG00000008641	PUM1	99	74.316	ENSPREG00000005195	pum1	99	81.144	Poecilia_reticulata
ENSOCUG00000008641	PUM1	99	96.867	ENSPPYG00000001621	PUM1	100	96.867	Pongo_abelii
ENSOCUG00000008641	PUM1	77	99.174	ENSPCAG00000001979	PUM1	74	99.174	Procavia_capensis
ENSOCUG00000008641	PUM1	99	98.738	ENSPCOG00000004398	PUM1	100	99.306	Propithecus_coquereli
ENSOCUG00000008641	PUM1	99	96.468	ENSPVAG00000005207	PUM1	97	96.468	Pteropus_vampyrus
ENSOCUG00000008641	PUM1	99	74.316	ENSPNYG00000009518	pum1	99	81.752	Pundamilia_nyererei
ENSOCUG00000008641	PUM1	99	78.912	ENSPNAG00000026728	pum1	99	80.251	Pygocentrus_nattereri
ENSOCUG00000008641	PUM1	99	98.568	ENSRNOG00000011709	Pum1	100	98.568	Rattus_norvegicus
ENSOCUG00000008641	PUM1	99	98.823	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSOCUG00000008641	PUM1	99	98.989	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSOCUG00000008641	PUM1	99	98.907	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSOCUG00000008641	PUM1	99	96.893	ENSSHAG00000010918	PUM1	100	96.893	Sarcophilus_harrisii
ENSOCUG00000008641	PUM1	89	88.631	ENSSMAG00000010918	pum1	99	91.241	Scophthalmus_maximus
ENSOCUG00000008641	PUM1	99	74.316	ENSSDUG00000009021	pum1	99	76.592	Seriola_dumerili
ENSOCUG00000008641	PUM1	95	75.884	ENSSLDG00000009667	pum1	99	78.631	Seriola_lalandi_dorsalis
ENSOCUG00000008641	PUM1	94	99.558	ENSSARG00000003055	PUM1	91	99.558	Sorex_araneus
ENSOCUG00000008641	PUM1	99	96.468	ENSSPUG00000006267	PUM1	100	96.468	Sphenodon_punctatus
ENSOCUG00000008641	PUM1	89	91.727	ENSSPAG00000016636	pum1	99	77.626	Stegastes_partitus
ENSOCUG00000008641	PUM1	99	98.991	ENSSSCG00000003591	PUM1	100	99.583	Sus_scrofa
ENSOCUG00000008641	PUM1	99	74.212	ENSTRUG00000013121	pum1	99	83.271	Takifugu_rubripes
ENSOCUG00000008641	PUM1	99	74.542	ENSTNIG00000016983	pum1	99	76.578	Tetraodon_nigroviridis
ENSOCUG00000008641	PUM1	87	96.341	ENSTBEG00000013810	PUM1	88	96.341	Tupaia_belangeri
ENSOCUG00000008641	PUM1	92	98.541	ENSTTRG00000007436	PUM1	90	98.541	Tursiops_truncatus
ENSOCUG00000008641	PUM1	98	98.707	ENSUAMG00000018262	-	100	98.707	Ursus_americanus
ENSOCUG00000008641	PUM1	95	98.068	ENSUMAG00000009211	PUM1	100	98.068	Ursus_maritimus
ENSOCUG00000008641	PUM1	92	98.983	ENSVPAG00000005902	PUM1	92	98.983	Vicugna_pacos
ENSOCUG00000008641	PUM1	99	98.738	ENSVVUG00000014631	PUM1	100	98.738	Vulpes_vulpes
ENSOCUG00000008641	PUM1	99	87.070	ENSXETG00000012904	pum1	99	86.230	Xenopus_tropicalis
ENSOCUG00000008641	PUM1	99	73.571	ENSXMAG00000002945	pum1	99	77.905	Xiphophorus_maculatus