EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000008886 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 1334 bases
Position: chr4:68570389-68571722
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000020656	DEAD	PF00270.29	4.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000028148	-	1308	-	ENSOCUP00000020656	435 (aa)	-	G1TUD1

Gene Model

Click here to download ENSOCUG00000008886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000008886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000008886	-	89	48.130	ENSOCUG00000004476	DDX25	83	48.130
ENSOCUG00000008886	-	99	64.602	ENSOCUG00000004095	-	87	64.602
ENSOCUG00000008886	-	77	30.966	ENSOCUG00000010375	EIF4A1	87	30.220
ENSOCUG00000008886	-	72	31.193	ENSOCUG00000005011	EIF4A2	82	31.304

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000008886	-	57	68.000	ENSETEG00000002459	-	53	68.000	Echinops_telfairi
ENSOCUG00000008886	-	60	60.000	ENSEEUG00000004407	-	55	60.000	Erinaceus_europaeus
ENSOCUG00000008886	-	93	47.156	ENSMNEG00000040748	-	92	46.712	Macaca_nemestrina
ENSOCUG00000008886	-	100	62.667	ENSMLEG00000042907	-	94	63.492	Mandrillus_leucophaeus
ENSOCUG00000008886	-	100	41.921	ENSMPUG00000010211	-	95	41.775	Mustela_putorius_furo
ENSOCUG00000008886	-	97	56.979	ENSMEUG00000012215	-	99	56.979	Notamacropus_eugenii
ENSOCUG00000008886	-	98	58.542	ENSPANG00000018646	-	95	58.542	Papio_anubis
ENSOCUG00000008886	-	100	44.072	ENSSBOG00000034490	-	92	44.072	Saimiri_boliviensis_boliviensis
ENSOCUG00000008886	-	51	64.972	ENSVPAG00000003194	-	60	64.972	Vicugna_pacos