EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000009306 (Gene tree)
Gene ID: -
Gene Symbol: LARP6
Alias: -
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 2479 bases
Position: chrGL018775:819158-821636
Accession: 24012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000008032	La	PF05383.17	2.1e-18	1	1
ENSOCUP00000023224	La	PF05383.17	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000025248	LARP6-202	1260	-	ENSOCUP00000023224	420 (aa)	-	G1U1I9
ENSOCUT00000009306	LARP6-201	1212	-	ENSOCUP00000008032	403 (aa)	-	G1SWY8

Gene Model

Click here to download ENSOCUG00000009306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000009306's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000009306	LARP6	99	83.452	ENSG00000166173	LARP6	100	96.774	Homo_sapiens
ENSOCUG00000009306	LARP6	97	59.005	ENSAPOG00000021773	larp6a	58	58.680	Acanthochromis_polyacanthus
ENSOCUG00000009306	LARP6	99	80.660	ENSAMEG00000008897	LARP6	99	81.132	Ailuropoda_melanoleuca
ENSOCUG00000009306	LARP6	97	59.716	ENSACIG00000005166	larp6a	80	59.169	Amphilophus_citrinellus
ENSOCUG00000009306	LARP6	97	59.005	ENSAOCG00000002284	larp6a	58	58.680	Amphiprion_ocellaris
ENSOCUG00000009306	LARP6	97	59.005	ENSAPEG00000008077	larp6a	79	59.658	Amphiprion_percula
ENSOCUG00000009306	LARP6	97	59.242	ENSATEG00000004018	larp6a	58	58.924	Anabas_testudineus
ENSOCUG00000009306	LARP6	99	62.945	ENSAPLG00000009914	LARP6	96	64.216	Anas_platyrhynchos
ENSOCUG00000009306	LARP6	97	66.173	ENSACAG00000008613	LARP6	95	66.500	Anolis_carolinensis
ENSOCUG00000009306	LARP6	99	83.688	ENSANAG00000024860	LARP6	86	83.688	Aotus_nancymaae
ENSOCUG00000009306	LARP6	97	59.716	ENSACLG00000018561	larp6a	57	59.169	Astatotilapia_calliptera
ENSOCUG00000009306	LARP6	97	58.255	ENSAMXG00000029387	larp6a	62	60.097	Astyanax_mexicanus
ENSOCUG00000009306	LARP6	99	39.953	ENSAMXG00000036816	-	92	40.561	Astyanax_mexicanus
ENSOCUG00000009306	LARP6	99	82.783	ENSBTAG00000003915	LARP6	86	82.783	Bos_taurus
ENSOCUG00000009306	LARP6	99	83.215	ENSCJAG00000018642	-	86	83.215	Callithrix_jacchus
ENSOCUG00000009306	LARP6	99	82.742	ENSCJAG00000046236	-	86	82.742	Callithrix_jacchus
ENSOCUG00000009306	LARP6	99	81.132	ENSCAFG00000017616	LARP6	99	81.132	Canis_familiaris
ENSOCUG00000009306	LARP6	99	81.132	ENSCAFG00020007296	LARP6	87	81.324	Canis_lupus_dingo
ENSOCUG00000009306	LARP6	99	82.311	ENSCHIG00000013742	LARP6	86	82.311	Capra_hircus
ENSOCUG00000009306	LARP6	99	81.840	ENSTSYG00000028124	LARP6	87	82.311	Carlito_syrichta
ENSOCUG00000009306	LARP6	100	79.294	ENSCAPG00000015452	LARP6	100	79.294	Cavia_aperea
ENSOCUG00000009306	LARP6	100	79.294	ENSCPOG00000022687	LARP6	86	79.294	Cavia_porcellus
ENSOCUG00000009306	LARP6	99	82.742	ENSCCAG00000036320	LARP6	86	82.742	Cebus_capucinus
ENSOCUG00000009306	LARP6	99	82.979	ENSCATG00000042432	LARP6	86	82.979	Cercocebus_atys
ENSOCUG00000009306	LARP6	100	81.176	ENSCLAG00000007893	LARP6	86	81.176	Chinchilla_lanigera
ENSOCUG00000009306	LARP6	99	83.215	ENSCSAG00000013672	LARP6	86	83.215	Chlorocebus_sabaeus
ENSOCUG00000009306	LARP6	100	81.412	ENSCHOG00000003318	LARP6	89	81.412	Choloepus_hoffmanni
ENSOCUG00000009306	LARP6	99	63.895	ENSCPBG00000010771	LARP6	82	63.895	Chrysemys_picta_bellii
ENSOCUG00000009306	LARP6	99	83.215	ENSCANG00000025833	LARP6	99	83.215	Colobus_angolensis_palliatus
ENSOCUG00000009306	LARP6	100	81.882	ENSCGRG00001024472	Larp6	86	81.882	Cricetulus_griseus_chok1gshd
ENSOCUG00000009306	LARP6	100	81.882	ENSCGRG00000004527	Larp6	86	81.882	Cricetulus_griseus_crigri
ENSOCUG00000009306	LARP6	97	59.620	ENSCSEG00000011196	larp6a	61	59.559	Cynoglossus_semilaevis
ENSOCUG00000009306	LARP6	97	59.102	ENSCVAG00000009605	larp6a	60	58.780	Cyprinodon_variegatus
ENSOCUG00000009306	LARP6	99	56.036	ENSDARG00000005355	larp6a	97	58.950	Danio_rerio
ENSOCUG00000009306	LARP6	100	82.353	ENSDNOG00000042993	LARP6	87	82.353	Dasypus_novemcinctus
ENSOCUG00000009306	LARP6	99	76.471	ENSDORG00000023910	Larp6	87	76.471	Dipodomys_ordii
ENSOCUG00000009306	LARP6	75	82.564	ENSETEG00000020390	LARP6	65	82.564	Echinops_telfairi
ENSOCUG00000009306	LARP6	99	83.452	ENSEASG00005005490	LARP6	63	83.452	Equus_asinus_asinus
ENSOCUG00000009306	LARP6	99	83.255	ENSECAG00000014190	LARP6	94	83.255	Equus_caballus
ENSOCUG00000009306	LARP6	97	58.019	ENSELUG00000007341	larp6a	60	58.151	Esox_lucius
ENSOCUG00000009306	LARP6	99	82.742	ENSFCAG00000001361	LARP6	86	82.742	Felis_catus
ENSOCUG00000009306	LARP6	99	62.118	ENSFALG00000012389	LARP6	87	64.216	Ficedula_albicollis
ENSOCUG00000009306	LARP6	99	82.033	ENSFDAG00000019994	LARP6	83	82.033	Fukomys_damarensis
ENSOCUG00000009306	LARP6	97	59.338	ENSFHEG00000010312	larp6a	59	59.268	Fundulus_heteroclitus
ENSOCUG00000009306	LARP6	50	68.182	ENSGMOG00000002119	larp6a	65	75.472	Gadus_morhua
ENSOCUG00000009306	LARP6	99	63.915	ENSGALG00000004046	LARP6	83	65.441	Gallus_gallus
ENSOCUG00000009306	LARP6	97	59.338	ENSGAFG00000009426	larp6a	61	59.024	Gambusia_affinis
ENSOCUG00000009306	LARP6	94	59.806	ENSGACG00000014622	larp6a	93	58.780	Gasterosteus_aculeatus
ENSOCUG00000009306	LARP6	91	63.990	ENSGAGG00000010802	LARP6	54	65.946	Gopherus_agassizii
ENSOCUG00000009306	LARP6	99	83.452	ENSGGOG00000024151	LARP6	99	83.452	Gorilla_gorilla
ENSOCUG00000009306	LARP6	97	59.716	ENSHBUG00000021014	larp6a	57	59.169	Haplochromis_burtoni
ENSOCUG00000009306	LARP6	99	81.840	ENSHGLG00000015112	LARP6	86	81.840	Heterocephalus_glaber_female
ENSOCUG00000009306	LARP6	99	81.840	ENSHGLG00100013159	LARP6	99	81.840	Heterocephalus_glaber_male
ENSOCUG00000009306	LARP6	97	58.432	ENSHCOG00000001241	larp6a	79	59.314	Hippocampus_comes
ENSOCUG00000009306	LARP6	96	38.325	ENSIPUG00000002828	-	94	38.107	Ictalurus_punctatus
ENSOCUG00000009306	LARP6	97	59.485	ENSIPUG00000010187	larp6	63	59.124	Ictalurus_punctatus
ENSOCUG00000009306	LARP6	100	82.824	ENSSTOG00000024279	LARP6	92	82.824	Ictidomys_tridecemlineatus
ENSOCUG00000009306	LARP6	100	80.706	ENSJJAG00000011013	Larp6	84	82.353	Jaculus_jaculus
ENSOCUG00000009306	LARP6	97	59.953	ENSKMAG00000001702	larp6a	56	59.611	Kryptolebias_marmoratus
ENSOCUG00000009306	LARP6	97	57.075	ENSLBEG00000000170	larp6a	78	56.691	Labrus_bergylta
ENSOCUG00000009306	LARP6	98	39.767	ENSLACG00000002786	-	96	42.029	Latimeria_chalumnae
ENSOCUG00000009306	LARP6	99	64.663	ENSLACG00000018706	LARP6	78	65.757	Latimeria_chalumnae
ENSOCUG00000009306	LARP6	98	61.412	ENSLOCG00000014592	larp6a	61	62.621	Lepisosteus_oculatus
ENSOCUG00000009306	LARP6	98	40.941	ENSLOCG00000008547	-	80	40.625	Lepisosteus_oculatus
ENSOCUG00000009306	LARP6	100	80.706	ENSLAFG00000016343	LARP6	95	80.851	Loxodonta_africana
ENSOCUG00000009306	LARP6	99	83.215	ENSMFAG00000035507	LARP6	94	83.215	Macaca_fascicularis
ENSOCUG00000009306	LARP6	99	83.215	ENSMMUG00000004429	LARP6	88	83.215	Macaca_mulatta
ENSOCUG00000009306	LARP6	99	83.215	ENSMNEG00000045335	LARP6	86	83.215	Macaca_nemestrina
ENSOCUG00000009306	LARP6	99	83.215	ENSMLEG00000038587	LARP6	99	83.215	Mandrillus_leucophaeus
ENSOCUG00000009306	LARP6	97	59.198	ENSMAMG00000005261	larp6a	58	58.881	Mastacembelus_armatus
ENSOCUG00000009306	LARP6	97	59.716	ENSMZEG00005005774	larp6a	57	59.169	Maylandia_zebra
ENSOCUG00000009306	LARP6	99	64.133	ENSMGAG00000005077	LARP6	97	65.441	Meleagris_gallopavo
ENSOCUG00000009306	LARP6	100	81.647	ENSMAUG00000018486	Larp6	86	81.647	Mesocricetus_auratus
ENSOCUG00000009306	LARP6	100	81.412	ENSMICG00000011234	LARP6	87	81.412	Microcebus_murinus
ENSOCUG00000009306	LARP6	100	82.353	ENSMOCG00000010492	Larp6	86	82.353	Microtus_ochrogaster
ENSOCUG00000009306	LARP6	97	59.620	ENSMMOG00000016284	larp6a	80	59.314	Mola_mola
ENSOCUG00000009306	LARP6	100	70.353	ENSMODG00000009034	LARP6	83	70.353	Monodelphis_domestica
ENSOCUG00000009306	LARP6	97	58.629	ENSMALG00000014439	larp6a	78	58.495	Monopterus_albus
ENSOCUG00000009306	LARP6	100	82.588	MGP_CAROLIEiJ_G0032314	Larp6	87	82.588	Mus_caroli
ENSOCUG00000009306	LARP6	100	82.353	ENSMUSG00000034839	Larp6	86	82.353	Mus_musculus
ENSOCUG00000009306	LARP6	100	82.118	MGP_PahariEiJ_G0015180	Larp6	86	82.118	Mus_pahari
ENSOCUG00000009306	LARP6	100	82.588	MGP_SPRETEiJ_G0033452	Larp6	86	82.588	Mus_spretus
ENSOCUG00000009306	LARP6	99	82.075	ENSMPUG00000017086	LARP6	99	82.547	Mustela_putorius_furo
ENSOCUG00000009306	LARP6	99	82.506	ENSMLUG00000010319	LARP6	86	82.506	Myotis_lucifugus
ENSOCUG00000009306	LARP6	100	81.119	ENSNGAG00000014238	Larp6	86	81.882	Nannospalax_galili
ENSOCUG00000009306	LARP6	97	59.953	ENSNBRG00000008120	larp6a	79	59.413	Neolamprologus_brichardi
ENSOCUG00000009306	LARP6	99	83.452	ENSNLEG00000013691	LARP6	86	83.452	Nomascus_leucogenys
ENSOCUG00000009306	LARP6	87	72.131	ENSMEUG00000002270	LARP6	74	72.857	Notamacropus_eugenii
ENSOCUG00000009306	LARP6	83	86.364	ENSOPRG00000004868	-	100	86.364	Ochotona_princeps
ENSOCUG00000009306	LARP6	100	81.235	ENSODEG00000015958	LARP6	86	81.235	Octodon_degus
ENSOCUG00000009306	LARP6	97	59.953	ENSONIG00000002901	larp6a	78	59.413	Oreochromis_niloticus
ENSOCUG00000009306	LARP6	97	59.479	ENSORLG00000014256	larp6a	81	60.147	Oryzias_latipes
ENSOCUG00000009306	LARP6	97	59.479	ENSORLG00020019657	larp6a	59	59.169	Oryzias_latipes_hni
ENSOCUG00000009306	LARP6	97	59.479	ENSORLG00015017915	larp6a	59	59.169	Oryzias_latipes_hsok
ENSOCUG00000009306	LARP6	97	59.479	ENSOMEG00000017049	larp6a	59	59.169	Oryzias_melastigma
ENSOCUG00000009306	LARP6	98	81.324	ENSOGAG00000000522	LARP6	86	80.142	Otolemur_garnettii
ENSOCUG00000009306	LARP6	99	81.604	ENSOARG00000018750	LARP6	98	81.604	Ovis_aries
ENSOCUG00000009306	LARP6	99	83.452	ENSPPAG00000031247	LARP6	99	83.452	Pan_paniscus
ENSOCUG00000009306	LARP6	99	82.270	ENSPPRG00000011282	LARP6	86	82.270	Panthera_pardus
ENSOCUG00000009306	LARP6	99	82.506	ENSPTIG00000015318	LARP6	86	82.506	Panthera_tigris_altaica
ENSOCUG00000009306	LARP6	99	83.452	ENSPTRG00000007234	LARP6	86	83.452	Pan_troglodytes
ENSOCUG00000009306	LARP6	99	83.215	ENSPANG00000016362	LARP6	86	83.215	Papio_anubis
ENSOCUG00000009306	LARP6	97	57.477	ENSPKIG00000004511	LARP6	62	58.057	Paramormyrops_kingsleyae
ENSOCUG00000009306	LARP6	99	59.545	ENSPKIG00000020103	larp6a	80	60.952	Paramormyrops_kingsleyae
ENSOCUG00000009306	LARP6	66	69.231	ENSPSIG00000009071	LARP6	83	69.903	Pelodiscus_sinensis
ENSOCUG00000009306	LARP6	97	59.906	ENSPMGG00000006958	larp6a	82	59.611	Periophthalmus_magnuspinnatus
ENSOCUG00000009306	LARP6	100	81.882	ENSPEMG00000012909	Larp6	86	81.882	Peromyscus_maniculatus_bairdii
ENSOCUG00000009306	LARP6	99	70.449	ENSPCIG00000020765	LARP6	82	70.449	Phascolarctos_cinereus
ENSOCUG00000009306	LARP6	97	59.574	ENSPFOG00000014175	larp6a	78	60.244	Poecilia_formosa
ENSOCUG00000009306	LARP6	97	59.574	ENSPLAG00000011105	larp6a	58	60.244	Poecilia_latipinna
ENSOCUG00000009306	LARP6	97	59.338	ENSPMEG00000011085	larp6a	59	59.024	Poecilia_mexicana
ENSOCUG00000009306	LARP6	97	59.574	ENSPREG00000008067	larp6a	59	59.268	Poecilia_reticulata
ENSOCUG00000009306	LARP6	99	83.452	ENSPPYG00000006604	LARP6	86	83.452	Pongo_abelii
ENSOCUG00000009306	LARP6	75	80.838	ENSPCAG00000014197	LARP6	76	80.838	Procavia_capensis
ENSOCUG00000009306	LARP6	99	81.132	ENSPCOG00000022934	LARP6	86	81.604	Propithecus_coquereli
ENSOCUG00000009306	LARP6	99	82.075	ENSPVAG00000005618	LARP6	86	82.075	Pteropus_vampyrus
ENSOCUG00000009306	LARP6	97	59.716	ENSPNYG00000009835	larp6a	79	59.169	Pundamilia_nyererei
ENSOCUG00000009306	LARP6	97	58.491	ENSPNAG00000017966	larp6a	68	60.341	Pygocentrus_nattereri
ENSOCUG00000009306	LARP6	100	81.412	ENSRNOG00000012438	Larp6	86	81.412	Rattus_norvegicus
ENSOCUG00000009306	LARP6	99	82.979	ENSRBIG00000032902	LARP6	87	83.215	Rhinopithecus_bieti
ENSOCUG00000009306	LARP6	99	82.979	ENSRROG00000043074	LARP6	86	83.215	Rhinopithecus_roxellana
ENSOCUG00000009306	LARP6	99	83.215	ENSSBOG00000024190	LARP6	99	83.215	Saimiri_boliviensis_boliviensis
ENSOCUG00000009306	LARP6	99	70.406	ENSSHAG00000018495	LARP6	99	70.406	Sarcophilus_harrisii
ENSOCUG00000009306	LARP6	99	56.010	ENSSFOG00015002254	LARP6	80	56.892	Scleropages_formosus
ENSOCUG00000009306	LARP6	97	60.192	ENSSFOG00015023268	larp6a	79	61.728	Scleropages_formosus
ENSOCUG00000009306	LARP6	99	58.295	ENSSMAG00000009953	larp6a	60	57.957	Scophthalmus_maximus
ENSOCUG00000009306	LARP6	97	59.434	ENSSDUG00000007438	larp6a	58	59.367	Seriola_dumerili
ENSOCUG00000009306	LARP6	97	59.434	ENSSLDG00000016647	larp6a	58	59.367	Seriola_lalandi_dorsalis
ENSOCUG00000009306	LARP6	99	64.608	ENSSPUG00000011312	LARP6	96	65.931	Sphenodon_punctatus
ENSOCUG00000009306	LARP6	97	59.005	ENSSPAG00000020502	larp6a	58	58.680	Stegastes_partitus
ENSOCUG00000009306	LARP6	99	81.604	ENSSSCG00000004974	LARP6	86	81.604	Sus_scrofa
ENSOCUG00000009306	LARP6	99	63.333	ENSTGUG00000005808	LARP6	96	64.619	Taeniopygia_guttata
ENSOCUG00000009306	LARP6	98	58.216	ENSTRUG00000003151	larp6a	61	57.627	Takifugu_rubripes
ENSOCUG00000009306	LARP6	99	57.598	ENSTNIG00000011926	larp6a	84	57.317	Tetraodon_nigroviridis
ENSOCUG00000009306	LARP6	99	81.176	ENSTBEG00000015077	LARP6	100	81.176	Tupaia_belangeri
ENSOCUG00000009306	LARP6	99	81.368	ENSUAMG00000010467	LARP6	85	81.840	Ursus_americanus
ENSOCUG00000009306	LARP6	99	81.132	ENSVVUG00000015227	LARP6	94	81.132	Vulpes_vulpes
ENSOCUG00000009306	LARP6	98	64.251	ENSXETG00000020340	larp6	81	66.085	Xenopus_tropicalis
ENSOCUG00000009306	LARP6	97	59.338	ENSXCOG00000012654	larp6a	83	59.024	Xiphophorus_couchianus
ENSOCUG00000009306	LARP6	97	59.338	ENSXMAG00000021015	larp6a	56	59.024	Xiphophorus_maculatus