EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000009381 (Gene tree)
Gene ID: 100346733
Gene Symbol: URB1
Alias: -
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 69327 bases
Position: chr14:162397587-162466913
Accession: 100346733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000008100	Npa1	PF11707.8	9.1e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000009391	URB1-201	6872	XM_002716696	ENSOCUP00000008100	2268 (aa)	XP_002716742	G1SX43

Gene Model

Click here to download ENSOCUG00000009381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000009381's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000009381	URB1	99	81.256	ENSG00000142207	URB1	99	81.085	Homo_sapiens
ENSOCUG00000009381	URB1	96	47.542	ENSAPOG00000020308	urb1	99	47.773	Acanthochromis_polyacanthus
ENSOCUG00000009381	URB1	99	78.811	ENSAMEG00000011998	URB1	99	78.811	Ailuropoda_melanoleuca
ENSOCUG00000009381	URB1	94	45.442	ENSACIG00000003248	urb1	96	45.518	Amphilophus_citrinellus
ENSOCUG00000009381	URB1	99	41.012	ENSAOCG00000010364	urb1	99	41.187	Amphiprion_ocellaris
ENSOCUG00000009381	URB1	99	42.608	ENSAPEG00000010758	urb1	99	42.782	Amphiprion_percula
ENSOCUG00000009381	URB1	99	44.168	ENSATEG00000011790	urb1	99	44.125	Anabas_testudineus
ENSOCUG00000009381	URB1	97	55.641	ENSAPLG00000012791	URB1	99	55.666	Anas_platyrhynchos
ENSOCUG00000009381	URB1	98	52.967	ENSACAG00000002817	URB1	99	52.487	Anolis_carolinensis
ENSOCUG00000009381	URB1	99	80.608	ENSANAG00000024617	URB1	99	80.608	Aotus_nancymaae
ENSOCUG00000009381	URB1	99	45.495	ENSACLG00000024865	urb1	99	45.166	Astatotilapia_calliptera
ENSOCUG00000009381	URB1	98	40.526	ENSAMXG00000012306	urb1	99	40.353	Astyanax_mexicanus
ENSOCUG00000009381	URB1	99	75.638	ENSBTAG00000012412	URB1	99	75.682	Bos_taurus
ENSOCUG00000009381	URB1	99	80.106	ENSCJAG00000009118	URB1	99	80.106	Callithrix_jacchus
ENSOCUG00000009381	URB1	99	78.612	ENSCAFG00000008892	URB1	99	78.612	Canis_familiaris
ENSOCUG00000009381	URB1	99	77.621	ENSCAFG00020025994	-	99	77.577	Canis_lupus_dingo
ENSOCUG00000009381	URB1	99	78.414	ENSCAFG00020025987	-	99	78.414	Canis_lupus_dingo
ENSOCUG00000009381	URB1	99	75.462	ENSCHIG00000015645	URB1	99	75.550	Capra_hircus
ENSOCUG00000009381	URB1	99	80.326	ENSTSYG00000013286	URB1	99	80.326	Carlito_syrichta
ENSOCUG00000009381	URB1	97	76.659	ENSCAPG00000015589	URB1	99	76.659	Cavia_aperea
ENSOCUG00000009381	URB1	99	77.650	ENSCPOG00000006748	URB1	99	77.650	Cavia_porcellus
ENSOCUG00000009381	URB1	99	80.661	ENSCCAG00000021299	URB1	99	80.661	Cebus_capucinus
ENSOCUG00000009381	URB1	99	80.908	ENSCATG00000042630	URB1	99	80.908	Cercocebus_atys
ENSOCUG00000009381	URB1	99	78.871	ENSCLAG00000005262	URB1	99	78.871	Chinchilla_lanigera
ENSOCUG00000009381	URB1	99	79.368	ENSCSAG00000009584	URB1	99	79.368	Chlorocebus_sabaeus
ENSOCUG00000009381	URB1	99	58.788	ENSCPBG00000006454	URB1	99	58.831	Chrysemys_picta_bellii
ENSOCUG00000009381	URB1	99	80.467	ENSCANG00000031088	URB1	99	80.467	Colobus_angolensis_palliatus
ENSOCUG00000009381	URB1	98	74.487	ENSCGRG00001010616	Urb1	99	74.394	Cricetulus_griseus_chok1gshd
ENSOCUG00000009381	URB1	97	74.212	ENSCGRG00000015840	Urb1	99	74.212	Cricetulus_griseus_crigri
ENSOCUG00000009381	URB1	99	42.795	ENSCSEG00000012616	urb1	99	42.609	Cynoglossus_semilaevis
ENSOCUG00000009381	URB1	95	52.985	ENSCVAG00000009076	urb1	98	53.461	Cyprinodon_variegatus
ENSOCUG00000009381	URB1	99	43.816	ENSDARG00000060308	urb1	99	44.084	Danio_rerio
ENSOCUG00000009381	URB1	85	77.784	ENSDNOG00000015586	URB1	99	77.784	Dasypus_novemcinctus
ENSOCUG00000009381	URB1	99	78.067	ENSDORG00000006735	Urb1	99	78.067	Dipodomys_ordii
ENSOCUG00000009381	URB1	91	81.481	ENSETEG00000009080	URB1	91	81.481	Echinops_telfairi
ENSOCUG00000009381	URB1	99	78.634	ENSEASG00005007711	URB1	98	79.853	Equus_asinus_asinus
ENSOCUG00000009381	URB1	96	88.608	ENSECAG00000013206	URB1	99	88.608	Equus_caballus
ENSOCUG00000009381	URB1	58	85.477	ENSEEUG00000003626	-	58	85.477	Erinaceus_europaeus
ENSOCUG00000009381	URB1	98	45.358	ENSELUG00000020516	urb1	98	45.438	Esox_lucius
ENSOCUG00000009381	URB1	99	78.619	ENSFCAG00000002177	URB1	99	78.707	Felis_catus
ENSOCUG00000009381	URB1	97	51.500	ENSFALG00000004636	URB1	99	51.571	Ficedula_albicollis
ENSOCUG00000009381	URB1	99	78.272	ENSFDAG00000007288	URB1	95	78.272	Fukomys_damarensis
ENSOCUG00000009381	URB1	99	42.420	ENSFHEG00000000202	urb1	99	43.144	Fundulus_heteroclitus
ENSOCUG00000009381	URB1	92	47.644	ENSGMOG00000001838	urb1	93	47.695	Gadus_morhua
ENSOCUG00000009381	URB1	99	56.223	ENSGALG00000015887	URB1	99	56.223	Gallus_gallus
ENSOCUG00000009381	URB1	98	43.559	ENSGAFG00000020694	urb1	96	53.189	Gambusia_affinis
ENSOCUG00000009381	URB1	98	44.998	ENSGACG00000011703	urb1	99	44.954	Gasterosteus_aculeatus
ENSOCUG00000009381	URB1	99	57.989	ENSGAGG00000022544	URB1	99	57.989	Gopherus_agassizii
ENSOCUG00000009381	URB1	99	81.217	ENSGGOG00000000285	URB1	99	81.217	Gorilla_gorilla
ENSOCUG00000009381	URB1	99	45.495	ENSHBUG00000001904	urb1	99	45.166	Haplochromis_burtoni
ENSOCUG00000009381	URB1	99	77.826	ENSHGLG00000004907	URB1	99	77.826	Heterocephalus_glaber_female
ENSOCUG00000009381	URB1	99	78.502	ENSHGLG00100010749	URB1	99	78.502	Heterocephalus_glaber_male
ENSOCUG00000009381	URB1	70	51.357	ENSHCOG00000018683	urb1	97	51.938	Hippocampus_comes
ENSOCUG00000009381	URB1	99	40.804	ENSIPUG00000014721	urb1	99	40.611	Ictalurus_punctatus
ENSOCUG00000009381	URB1	99	80.485	ENSSTOG00000004539	URB1	99	80.485	Ictidomys_tridecemlineatus
ENSOCUG00000009381	URB1	99	46.132	ENSKMAG00000006001	urb1	99	47.360	Kryptolebias_marmoratus
ENSOCUG00000009381	URB1	93	50.949	ENSLBEG00000027208	urb1	98	50.949	Labrus_bergylta
ENSOCUG00000009381	URB1	99	48.076	ENSLACG00000017059	URB1	100	48.119	Latimeria_chalumnae
ENSOCUG00000009381	URB1	99	46.444	ENSLOCG00000009190	urb1	99	46.444	Lepisosteus_oculatus
ENSOCUG00000009381	URB1	99	76.098	ENSLAFG00000010407	URB1	99	76.086	Loxodonta_africana
ENSOCUG00000009381	URB1	99	80.864	ENSMFAG00000034391	URB1	97	80.864	Macaca_fascicularis
ENSOCUG00000009381	URB1	99	80.688	ENSMMUG00000010295	URB1	99	80.688	Macaca_mulatta
ENSOCUG00000009381	URB1	99	79.532	ENSMNEG00000032981	URB1	99	79.532	Macaca_nemestrina
ENSOCUG00000009381	URB1	99	80.952	ENSMLEG00000041435	URB1	99	80.952	Mandrillus_leucophaeus
ENSOCUG00000009381	URB1	99	43.446	ENSMAMG00000011238	urb1	99	43.402	Mastacembelus_armatus
ENSOCUG00000009381	URB1	99	41.153	ENSMZEG00005011862	urb1	99	40.866	Maylandia_zebra
ENSOCUG00000009381	URB1	98	56.400	ENSMGAG00000014512	URB1	99	56.400	Meleagris_gallopavo
ENSOCUG00000009381	URB1	92	77.080	ENSMAUG00000010516	Urb1	99	77.664	Mesocricetus_auratus
ENSOCUG00000009381	URB1	99	80.908	ENSMICG00000016424	URB1	99	80.908	Microcebus_murinus
ENSOCUG00000009381	URB1	99	73.072	ENSMOCG00000012613	Urb1	99	73.072	Microtus_ochrogaster
ENSOCUG00000009381	URB1	99	62.604	ENSMODG00000021076	URB1	99	62.604	Monodelphis_domestica
ENSOCUG00000009381	URB1	95	43.464	ENSMALG00000017411	urb1	96	52.114	Monopterus_albus
ENSOCUG00000009381	URB1	99	73.580	MGP_CAROLIEiJ_G0020948	Urb1	99	73.580	Mus_caroli
ENSOCUG00000009381	URB1	99	74.108	ENSMUSG00000039929	Urb1	99	74.108	Mus_musculus
ENSOCUG00000009381	URB1	99	74.020	MGP_PahariEiJ_G0016653	Urb1	99	74.020	Mus_pahari
ENSOCUG00000009381	URB1	99	73.844	MGP_SPRETEiJ_G0021854	Urb1	99	73.844	Mus_spretus
ENSOCUG00000009381	URB1	99	78.543	ENSMPUG00000001123	URB1	99	78.543	Mustela_putorius_furo
ENSOCUG00000009381	URB1	99	74.835	ENSNGAG00000001905	Urb1	99	74.835	Nannospalax_galili
ENSOCUG00000009381	URB1	80	46.048	ENSNBRG00000001049	urb1	98	46.048	Neolamprologus_brichardi
ENSOCUG00000009381	URB1	99	79.178	ENSNLEG00000026872	URB1	99	79.012	Nomascus_leucogenys
ENSOCUG00000009381	URB1	93	66.412	ENSMEUG00000010828	URB1	96	59.243	Notamacropus_eugenii
ENSOCUG00000009381	URB1	99	80.194	ENSOPRG00000013482	URB1	99	80.194	Ochotona_princeps
ENSOCUG00000009381	URB1	99	77.415	ENSODEG00000002587	URB1	99	77.415	Octodon_degus
ENSOCUG00000009381	URB1	99	45.213	ENSONIG00000005599	urb1	99	45.170	Oreochromis_niloticus
ENSOCUG00000009381	URB1	99	44.624	ENSORLG00000003429	urb1	99	44.624	Oryzias_latipes
ENSOCUG00000009381	URB1	99	44.372	ENSORLG00020013785	urb1	99	44.372	Oryzias_latipes_hni
ENSOCUG00000009381	URB1	99	42.870	ENSORLG00015019421	urb1	98	46.775	Oryzias_latipes_hsok
ENSOCUG00000009381	URB1	77	51.300	ENSOMEG00000002094	urb1	98	51.300	Oryzias_melastigma
ENSOCUG00000009381	URB1	99	79.665	ENSOGAG00000017140	URB1	99	79.665	Otolemur_garnettii
ENSOCUG00000009381	URB1	97	76.071	ENSOARG00000013679	URB1	99	76.071	Ovis_aries
ENSOCUG00000009381	URB1	99	81.261	ENSPPAG00000003423	URB1	99	81.261	Pan_paniscus
ENSOCUG00000009381	URB1	99	78.732	ENSPPRG00000023131	URB1	99	78.732	Panthera_pardus
ENSOCUG00000009381	URB1	91	78.642	ENSPTIG00000016125	URB1	97	78.642	Panthera_tigris_altaica
ENSOCUG00000009381	URB1	99	81.129	ENSPTRG00000013852	URB1	99	81.129	Pan_troglodytes
ENSOCUG00000009381	URB1	99	80.908	ENSPANG00000021964	URB1	99	80.908	Papio_anubis
ENSOCUG00000009381	URB1	99	46.726	ENSPKIG00000003683	urb1	98	46.770	Paramormyrops_kingsleyae
ENSOCUG00000009381	URB1	99	75.099	ENSPEMG00000021205	Urb1	99	75.099	Peromyscus_maniculatus_bairdii
ENSOCUG00000009381	URB1	77	34.060	ENSPMAG00000009733	URB1	99	34.400	Petromyzon_marinus
ENSOCUG00000009381	URB1	99	62.297	ENSPCIG00000016350	URB1	99	62.674	Phascolarctos_cinereus
ENSOCUG00000009381	URB1	96	43.543	ENSPLAG00000004371	urb1	99	43.583	Poecilia_latipinna
ENSOCUG00000009381	URB1	99	44.346	ENSPMEG00000006634	urb1	99	44.385	Poecilia_mexicana
ENSOCUG00000009381	URB1	99	44.264	ENSPREG00000013453	urb1	99	44.303	Poecilia_reticulata
ENSOCUG00000009381	URB1	99	80.902	ENSPPYG00000011359	URB1	99	80.732	Pongo_abelii
ENSOCUG00000009381	URB1	99	66.225	ENSPCAG00000007430	URB1	99	66.225	Procavia_capensis
ENSOCUG00000009381	URB1	99	81.517	ENSPCOG00000022695	URB1	99	81.517	Propithecus_coquereli
ENSOCUG00000009381	URB1	99	77.225	ENSPVAG00000000889	URB1	99	77.225	Pteropus_vampyrus
ENSOCUG00000009381	URB1	99	44.547	ENSPNYG00000010589	urb1	99	44.226	Pundamilia_nyererei
ENSOCUG00000009381	URB1	99	40.472	ENSPNAG00000019324	urb1	99	40.454	Pygocentrus_nattereri
ENSOCUG00000009381	URB1	99	73.944	ENSRNOG00000002080	Urb1	99	74.076	Rattus_norvegicus
ENSOCUG00000009381	URB1	99	80.511	ENSRBIG00000033122	URB1	99	80.511	Rhinopithecus_bieti
ENSOCUG00000009381	URB1	99	80.556	ENSRROG00000040237	URB1	99	80.556	Rhinopithecus_roxellana
ENSOCUG00000009381	URB1	99	80.713	ENSSBOG00000027672	URB1	99	80.713	Saimiri_boliviensis_boliviensis
ENSOCUG00000009381	URB1	99	61.930	ENSSHAG00000005140	URB1	100	61.930	Sarcophilus_harrisii
ENSOCUG00000009381	URB1	92	46.789	ENSSFOG00015000339	urb1	99	46.695	Scleropages_formosus
ENSOCUG00000009381	URB1	98	45.066	ENSSMAG00000003782	urb1	99	44.784	Scophthalmus_maximus
ENSOCUG00000009381	URB1	99	45.244	ENSSDUG00000012313	urb1	99	45.244	Seriola_dumerili
ENSOCUG00000009381	URB1	99	45.061	ENSSLDG00000023179	urb1	99	45.017	Seriola_lalandi_dorsalis
ENSOCUG00000009381	URB1	99	54.771	ENSSPUG00000012447	URB1	99	55.061	Sphenodon_punctatus
ENSOCUG00000009381	URB1	99	44.512	ENSSPAG00000006325	urb1	99	44.507	Stegastes_partitus
ENSOCUG00000009381	URB1	99	77.062	ENSSSCG00000032024	URB1	99	77.062	Sus_scrofa
ENSOCUG00000009381	URB1	73	58.159	ENSTGUG00000013442	URB1	100	58.159	Taeniopygia_guttata
ENSOCUG00000009381	URB1	99	43.596	ENSTRUG00000009372	urb1	99	43.415	Takifugu_rubripes
ENSOCUG00000009381	URB1	99	42.857	ENSTNIG00000016277	urb1	99	42.718	Tetraodon_nigroviridis
ENSOCUG00000009381	URB1	81	81.214	ENSTBEG00000010044	URB1	81	81.214	Tupaia_belangeri
ENSOCUG00000009381	URB1	90	78.197	ENSTTRG00000007712	URB1	92	78.407	Tursiops_truncatus
ENSOCUG00000009381	URB1	99	78.722	ENSUAMG00000012231	URB1	99	78.722	Ursus_americanus
ENSOCUG00000009381	URB1	94	78.929	ENSUMAG00000017419	URB1	99	78.929	Ursus_maritimus
ENSOCUG00000009381	URB1	68	89.683	ENSVPAG00000001164	URB1	68	89.683	Vicugna_pacos
ENSOCUG00000009381	URB1	99	78.355	ENSVVUG00000000551	URB1	99	78.355	Vulpes_vulpes
ENSOCUG00000009381	URB1	99	50.216	ENSXETG00000009895	urb1	99	50.130	Xenopus_tropicalis
ENSOCUG00000009381	URB1	98	42.238	ENSXCOG00000005500	urb1	99	42.238	Xiphophorus_couchianus
ENSOCUG00000009381	URB1	98	42.275	ENSXMAG00000007253	urb1	99	42.275	Xiphophorus_maculatus