EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000009713 (Gene tree)
Gene ID: 100355231
Gene Symbol: -
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 13085 bases
Position: chr20:27724659-27737743
Accession: 100355231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000008365	RRM_1	PF00076.22	4.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000009711	-	2337	XM_002719623	ENSOCUP00000008365	111 (aa)	XP_002719669	G1SXR7

Gene Model

Click here to download ENSOCUG00000009713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000009713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000009713	-	68	34.328	ENSOCUG00000026424	HNRNPAB	53	34.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000009713	-	92	77.451	ENSBTAG00000050457	-	100	77.451	Bos_taurus
ENSOCUG00000009713	-	90	88.000	ENSBTAG00000008135	SLIRP	100	86.486	Bos_taurus
ENSOCUG00000009713	-	90	86.000	ENSCAFG00000017230	SLIRP	100	84.685	Canis_familiaris
ENSOCUG00000009713	-	90	86.000	ENSCAFG00020000852	-	100	84.685	Canis_lupus_dingo
ENSOCUG00000009713	-	100	87.387	ENSCHIG00000019077	-	100	87.387	Capra_hircus
ENSOCUG00000009713	-	100	81.982	ENSCHIG00000002964	-	100	81.982	Capra_hircus
ENSOCUG00000009713	-	100	80.180	ENSCPOG00000001500	-	100	80.180	Cavia_porcellus
ENSOCUG00000009713	-	100	78.378	ENSCLAG00000008545	-	100	78.378	Chinchilla_lanigera
ENSOCUG00000009713	-	90	62.000	ENSDNOG00000041397	-	90	62.000	Dasypus_novemcinctus
ENSOCUG00000009713	-	100	90.991	ENSECAG00000000712	SLIRP	100	90.991	Equus_caballus
ENSOCUG00000009713	-	89	83.838	ENSJJAG00000018723	-	100	81.081	Jaculus_jaculus
ENSOCUG00000009713	-	100	77.477	MGP_PahariEiJ_G0029754	-	100	77.477	Mus_pahari
ENSOCUG00000009713	-	90	88.000	ENSMLUG00000022403	-	100	85.586	Myotis_lucifugus
ENSOCUG00000009713	-	100	86.486	ENSOPRG00000007560	-	100	86.486	Ochotona_princeps
ENSOCUG00000009713	-	90	73.000	ENSOGAG00000027580	-	99	72.072	Otolemur_garnettii
ENSOCUG00000009713	-	100	72.072	ENSOARG00000016139	-	100	72.072	Ovis_aries
ENSOCUG00000009713	-	90	88.000	ENSOARG00000002642	SLIRP	100	85.586	Ovis_aries
ENSOCUG00000009713	-	88	64.286	ENSPCAG00000004290	-	100	66.667	Procavia_capensis
ENSOCUG00000009713	-	70	83.333	ENSPVAG00000006420	-	70	83.333	Pteropus_vampyrus
ENSOCUG00000009713	-	100	78.378	ENSRNOG00000012314	Slirp	100	78.378	Rattus_norvegicus
ENSOCUG00000009713	-	100	87.387	ENSTBEG00000013979	-	100	87.387	Tupaia_belangeri
ENSOCUG00000009713	-	70	89.744	ENSTTRG00000009328	-	100	72.973	Tursiops_truncatus