EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000009864 (Gene tree)
Gene ID: 100350234
Gene Symbol: SNRNP200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 31499 bases
Position: chr2:95024248-95055746
Accession: 100350234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000008503	ResIII	PF04851.15	7.8e-26	1	2
ENSOCUP00000008503	ResIII	PF04851.15	7.8e-26	2	2
ENSOCUP00000008503	DEAD	PF00270.29	4e-52	1	2
ENSOCUP00000008503	DEAD	PF00270.29	4e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000009873	SNRNP200-201	6652	XM_002710029	ENSOCUP00000008503	2136 (aa)	XP_002710075	G1SY30

Gene Model

Click here to download ENSOCUG00000009864's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000009864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000009864	SNRNP200	80	44.519	ENSOCUG00000002766	ASCC3	81	44.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000009864	SNRNP200	100	99.766	ENSG00000144028	SNRNP200	100	99.766	Homo_sapiens
ENSOCUG00000009864	SNRNP200	99	90.841	ENSAPOG00000010223	snrnp200	99	90.730	Acanthochromis_polyacanthus
ENSOCUG00000009864	SNRNP200	100	99.719	ENSAMEG00000008996	SNRNP200	100	99.719	Ailuropoda_melanoleuca
ENSOCUG00000009864	SNRNP200	97	90.310	ENSACIG00000001764	snrnp200	98	90.310	Amphilophus_citrinellus
ENSOCUG00000009864	SNRNP200	99	90.841	ENSAOCG00000024593	snrnp200	100	90.096	Amphiprion_ocellaris
ENSOCUG00000009864	SNRNP200	97	90.043	ENSAPEG00000012554	snrnp200	100	90.043	Amphiprion_percula
ENSOCUG00000009864	SNRNP200	99	90.606	ENSATEG00000022522	snrnp200	99	90.496	Anabas_testudineus
ENSOCUG00000009864	SNRNP200	99	97.548	ENSAPLG00000004313	SNRNP200	100	97.548	Anas_platyrhynchos
ENSOCUG00000009864	SNRNP200	99	97.322	ENSACAG00000000434	SNRNP200	100	97.322	Anolis_carolinensis
ENSOCUG00000009864	SNRNP200	100	95.196	ENSANAG00000036625	SNRNP200	100	95.616	Aotus_nancymaae
ENSOCUG00000009864	SNRNP200	99	90.465	ENSACLG00000011188	snrnp200	99	90.356	Astatotilapia_calliptera
ENSOCUG00000009864	SNRNP200	99	90.559	ENSAMXG00000005684	snrnp200	99	90.449	Astyanax_mexicanus
ENSOCUG00000009864	SNRNP200	100	99.157	ENSBTAG00000000848	SNRNP200	100	99.157	Bos_taurus
ENSOCUG00000009864	SNRNP200	100	99.719	ENSCJAG00000007514	SNRNP200	100	99.719	Callithrix_jacchus
ENSOCUG00000009864	SNRNP200	100	98.927	ENSCAFG00020019979	SNRNP200	100	99.825	Canis_lupus_dingo
ENSOCUG00000009864	SNRNP200	100	99.345	ENSCHIG00000020611	SNRNP200	100	99.345	Capra_hircus
ENSOCUG00000009864	SNRNP200	100	99.766	ENSTSYG00000010467	SNRNP200	100	99.766	Carlito_syrichta
ENSOCUG00000009864	SNRNP200	99	99.295	ENSCAPG00000017234	SNRNP200	99	99.295	Cavia_aperea
ENSOCUG00000009864	SNRNP200	100	99.579	ENSCPOG00000006776	SNRNP200	100	99.579	Cavia_porcellus
ENSOCUG00000009864	SNRNP200	100	99.719	ENSCCAG00000033962	SNRNP200	100	99.719	Cebus_capucinus
ENSOCUG00000009864	SNRNP200	100	99.766	ENSCATG00000015790	SNRNP200	100	99.766	Cercocebus_atys
ENSOCUG00000009864	SNRNP200	100	99.438	ENSCLAG00000004116	SNRNP200	100	99.438	Chinchilla_lanigera
ENSOCUG00000009864	SNRNP200	100	99.719	ENSCSAG00000017369	SNRNP200	100	99.719	Chlorocebus_sabaeus
ENSOCUG00000009864	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSOCUG00000009864	SNRNP200	100	97.616	ENSCPBG00000022571	SNRNP200	100	97.616	Chrysemys_picta_bellii
ENSOCUG00000009864	SNRNP200	99	76.506	ENSCING00000005082	-	99	76.646	Ciona_intestinalis
ENSOCUG00000009864	SNRNP200	100	94.255	ENSCANG00000033932	SNRNP200	100	99.701	Colobus_angolensis_palliatus
ENSOCUG00000009864	SNRNP200	100	99.625	ENSCGRG00001022610	Snrnp200	100	99.625	Cricetulus_griseus_chok1gshd
ENSOCUG00000009864	SNRNP200	100	99.065	ENSCGRG00000016472	Snrnp200	100	99.065	Cricetulus_griseus_crigri
ENSOCUG00000009864	SNRNP200	100	89.841	ENSCSEG00000016399	snrnp200	100	89.841	Cynoglossus_semilaevis
ENSOCUG00000009864	SNRNP200	100	85.581	ENSCVAG00000017631	snrnp200	99	85.581	Cyprinodon_variegatus
ENSOCUG00000009864	SNRNP200	100	90.309	ENSDARG00000077536	snrnp200	99	90.309	Danio_rerio
ENSOCUG00000009864	SNRNP200	100	98.221	ENSDNOG00000011227	SNRNP200	100	98.221	Dasypus_novemcinctus
ENSOCUG00000009864	SNRNP200	100	97.101	ENSDORG00000005861	Snrnp200	100	97.101	Dipodomys_ordii
ENSOCUG00000009864	SNRNP200	100	74.302	FBgn0263599	l(3)72Ab	99	74.209	Drosophila_melanogaster
ENSOCUG00000009864	SNRNP200	95	99.569	ENSETEG00000000162	SNRNP200	74	99.569	Echinops_telfairi
ENSOCUG00000009864	SNRNP200	83	81.345	ENSEBUG00000016524	snrnp200	95	81.345	Eptatretus_burgeri
ENSOCUG00000009864	SNRNP200	100	98.601	ENSEASG00005001884	SNRNP200	100	98.601	Equus_asinus_asinus
ENSOCUG00000009864	SNRNP200	100	99.719	ENSECAG00000019675	SNRNP200	100	99.719	Equus_caballus
ENSOCUG00000009864	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSOCUG00000009864	SNRNP200	99	90.794	ENSELUG00000018948	snrnp200	99	90.684	Esox_lucius
ENSOCUG00000009864	SNRNP200	100	99.766	ENSFCAG00000010699	SNRNP200	100	99.766	Felis_catus
ENSOCUG00000009864	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSOCUG00000009864	SNRNP200	100	99.485	ENSFDAG00000004683	SNRNP200	100	99.485	Fukomys_damarensis
ENSOCUG00000009864	SNRNP200	100	87.734	ENSFHEG00000003786	snrnp200	99	87.734	Fundulus_heteroclitus
ENSOCUG00000009864	SNRNP200	100	89.579	ENSGMOG00000004881	snrnp200	99	89.533	Gadus_morhua
ENSOCUG00000009864	SNRNP200	100	87.968	ENSGAFG00000010807	snrnp200	99	87.968	Gambusia_affinis
ENSOCUG00000009864	SNRNP200	100	89.958	ENSGACG00000011474	snrnp200	99	89.865	Gasterosteus_aculeatus
ENSOCUG00000009864	SNRNP200	95	97.532	ENSGAGG00000016069	SNRNP200	99	97.532	Gopherus_agassizii
ENSOCUG00000009864	SNRNP200	100	99.766	ENSGGOG00000005174	SNRNP200	100	99.766	Gorilla_gorilla
ENSOCUG00000009864	SNRNP200	97	87.727	ENSHBUG00000011322	snrnp200	99	87.774	Haplochromis_burtoni
ENSOCUG00000009864	SNRNP200	100	99.579	ENSHGLG00000006654	SNRNP200	100	99.579	Heterocephalus_glaber_female
ENSOCUG00000009864	SNRNP200	100	99.579	ENSHGLG00100018594	SNRNP200	100	99.579	Heterocephalus_glaber_male
ENSOCUG00000009864	SNRNP200	100	99.719	ENSSTOG00000016351	SNRNP200	100	99.719	Ictidomys_tridecemlineatus
ENSOCUG00000009864	SNRNP200	100	99.532	ENSJJAG00000023659	Snrnp200	100	99.532	Jaculus_jaculus
ENSOCUG00000009864	SNRNP200	100	87.494	ENSKMAG00000003665	snrnp200	99	87.494	Kryptolebias_marmoratus
ENSOCUG00000009864	SNRNP200	100	90.215	ENSLBEG00000021585	snrnp200	99	90.215	Labrus_bergylta
ENSOCUG00000009864	SNRNP200	82	94.664	ENSLACG00000000226	SNRNP200	99	94.664	Latimeria_chalumnae
ENSOCUG00000009864	SNRNP200	100	92.228	ENSLOCG00000015198	snrnp200	99	92.228	Lepisosteus_oculatus
ENSOCUG00000009864	SNRNP200	100	99.345	ENSLAFG00000015626	SNRNP200	100	99.345	Loxodonta_africana
ENSOCUG00000009864	SNRNP200	100	99.719	ENSMFAG00000040174	SNRNP200	100	99.719	Macaca_fascicularis
ENSOCUG00000009864	SNRNP200	100	99.719	ENSMMUG00000023261	SNRNP200	100	99.719	Macaca_mulatta
ENSOCUG00000009864	SNRNP200	100	99.672	ENSMNEG00000032398	SNRNP200	100	99.672	Macaca_nemestrina
ENSOCUG00000009864	SNRNP200	100	99.766	ENSMLEG00000019083	SNRNP200	100	99.766	Mandrillus_leucophaeus
ENSOCUG00000009864	SNRNP200	100	90.173	ENSMAMG00000007851	snrnp200	99	90.126	Mastacembelus_armatus
ENSOCUG00000009864	SNRNP200	97	87.727	ENSMZEG00005010787	snrnp200	99	87.774	Maylandia_zebra
ENSOCUG00000009864	SNRNP200	97	97.097	ENSMGAG00000001831	SNRNP200	100	97.097	Meleagris_gallopavo
ENSOCUG00000009864	SNRNP200	100	99.672	ENSMAUG00000011825	Snrnp200	100	99.672	Mesocricetus_auratus
ENSOCUG00000009864	SNRNP200	100	99.719	ENSMICG00000004710	SNRNP200	100	99.719	Microcebus_murinus
ENSOCUG00000009864	SNRNP200	100	97.191	ENSMOCG00000011814	Snrnp200	100	97.191	Microtus_ochrogaster
ENSOCUG00000009864	SNRNP200	99	89.056	ENSMMOG00000014167	snrnp200	99	88.951	Mola_mola
ENSOCUG00000009864	SNRNP200	100	98.830	ENSMODG00000008475	SNRNP200	100	98.830	Monodelphis_domestica
ENSOCUG00000009864	SNRNP200	99	90.747	ENSMALG00000001973	snrnp200	99	90.637	Monopterus_albus
ENSOCUG00000009864	SNRNP200	100	99.485	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.485	Mus_caroli
ENSOCUG00000009864	SNRNP200	100	99.532	ENSMUSG00000003660	Snrnp200	100	99.532	Mus_musculus
ENSOCUG00000009864	SNRNP200	100	99.579	MGP_PahariEiJ_G0025695	Snrnp200	100	99.579	Mus_pahari
ENSOCUG00000009864	SNRNP200	100	99.532	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.724	Mus_spretus
ENSOCUG00000009864	SNRNP200	100	99.672	ENSMPUG00000008949	SNRNP200	100	99.672	Mustela_putorius_furo
ENSOCUG00000009864	SNRNP200	100	95.459	ENSMLUG00000027511	-	100	95.459	Myotis_lucifugus
ENSOCUG00000009864	SNRNP200	100	99.112	ENSMLUG00000010493	SNRNP200	100	99.112	Myotis_lucifugus
ENSOCUG00000009864	SNRNP200	100	99.766	ENSNGAG00000021993	Snrnp200	100	99.766	Nannospalax_galili
ENSOCUG00000009864	SNRNP200	90	90.261	ENSNBRG00000017960	snrnp200	98	90.261	Neolamprologus_brichardi
ENSOCUG00000009864	SNRNP200	100	95.119	ENSNLEG00000000025	SNRNP200	100	95.289	Nomascus_leucogenys
ENSOCUG00000009864	SNRNP200	100	98.611	ENSMEUG00000010532	SNRNP200	79	98.611	Notamacropus_eugenii
ENSOCUG00000009864	SNRNP200	100	95.927	ENSOPRG00000015464	SNRNP200	100	95.927	Ochotona_princeps
ENSOCUG00000009864	SNRNP200	100	99.438	ENSODEG00000008366	SNRNP200	100	99.438	Octodon_degus
ENSOCUG00000009864	SNRNP200	99	90.465	ENSONIG00000010714	snrnp200	99	90.356	Oreochromis_niloticus
ENSOCUG00000009864	SNRNP200	100	90.356	ENSORLG00000012286	snrnp200	100	90.356	Oryzias_latipes
ENSOCUG00000009864	SNRNP200	100	90.403	ENSORLG00020004648	snrnp200	100	90.403	Oryzias_latipes_hni
ENSOCUG00000009864	SNRNP200	100	90.356	ENSORLG00015019114	snrnp200	100	90.391	Oryzias_latipes_hsok
ENSOCUG00000009864	SNRNP200	99	90.606	ENSOMEG00000011834	snrnp200	99	90.496	Oryzias_melastigma
ENSOCUG00000009864	SNRNP200	100	99.766	ENSOGAG00000006879	SNRNP200	100	99.766	Otolemur_garnettii
ENSOCUG00000009864	SNRNP200	100	98.362	ENSOARG00000013949	SNRNP200	100	98.362	Ovis_aries
ENSOCUG00000009864	SNRNP200	100	99.766	ENSPPAG00000041559	SNRNP200	100	99.766	Pan_paniscus
ENSOCUG00000009864	SNRNP200	100	99.766	ENSPPRG00000004435	SNRNP200	100	99.766	Panthera_pardus
ENSOCUG00000009864	SNRNP200	100	99.298	ENSPTIG00000006380	SNRNP200	100	99.298	Panthera_tigris_altaica
ENSOCUG00000009864	SNRNP200	100	99.766	ENSPTRG00000012230	SNRNP200	100	99.766	Pan_troglodytes
ENSOCUG00000009864	SNRNP200	100	99.719	ENSPANG00000006017	SNRNP200	100	99.719	Papio_anubis
ENSOCUG00000009864	SNRNP200	100	91.058	ENSPKIG00000014762	snrnp200	99	91.058	Paramormyrops_kingsleyae
ENSOCUG00000009864	SNRNP200	100	96.631	ENSPSIG00000008580	SNRNP200	100	96.631	Pelodiscus_sinensis
ENSOCUG00000009864	SNRNP200	100	98.830	ENSPCIG00000023050	SNRNP200	100	98.830	Phascolarctos_cinereus
ENSOCUG00000009864	SNRNP200	100	90.314	ENSPFOG00000015110	snrnp200	99	90.314	Poecilia_formosa
ENSOCUG00000009864	SNRNP200	97	90.165	ENSPLAG00000006711	snrnp200	99	90.165	Poecilia_latipinna
ENSOCUG00000009864	SNRNP200	97	90.110	ENSPMEG00000021166	snrnp200	99	90.110	Poecilia_mexicana
ENSOCUG00000009864	SNRNP200	100	90.403	ENSPREG00000008875	snrnp200	99	90.403	Poecilia_reticulata
ENSOCUG00000009864	SNRNP200	100	99.766	ENSPPYG00000012068	SNRNP200	100	99.766	Pongo_abelii
ENSOCUG00000009864	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSOCUG00000009864	SNRNP200	100	99.766	ENSPCOG00000024608	SNRNP200	100	99.766	Propithecus_coquereli
ENSOCUG00000009864	SNRNP200	96	99.320	ENSPVAG00000005860	SNRNP200	93	99.320	Pteropus_vampyrus
ENSOCUG00000009864	SNRNP200	99	85.948	ENSPNYG00000017476	snrnp200	99	85.854	Pundamilia_nyererei
ENSOCUG00000009864	SNRNP200	100	86.049	ENSPNAG00000010998	snrnp200	99	86.049	Pygocentrus_nattereri
ENSOCUG00000009864	SNRNP200	100	99.672	ENSRNOG00000012157	Snrnp200	100	99.672	Rattus_norvegicus
ENSOCUG00000009864	SNRNP200	100	99.766	ENSRBIG00000044690	-	100	99.766	Rhinopithecus_bieti
ENSOCUG00000009864	SNRNP200	100	99.766	ENSRROG00000037952	-	100	99.766	Rhinopithecus_roxellana
ENSOCUG00000009864	SNRNP200	100	99.719	ENSSBOG00000035471	SNRNP200	100	99.719	Saimiri_boliviensis_boliviensis
ENSOCUG00000009864	SNRNP200	97	98.742	ENSSHAG00000000758	SNRNP200	100	98.742	Sarcophilus_harrisii
ENSOCUG00000009864	SNRNP200	99	91.592	ENSSFOG00015018826	snrnp200	99	91.479	Scleropages_formosus
ENSOCUG00000009864	SNRNP200	99	90.418	ENSSMAG00000005463	snrnp200	99	90.309	Scophthalmus_maximus
ENSOCUG00000009864	SNRNP200	99	90.700	ENSSDUG00000021410	snrnp200	99	90.590	Seriola_dumerili
ENSOCUG00000009864	SNRNP200	99	90.653	ENSSLDG00000010884	snrnp200	99	90.543	Seriola_lalandi_dorsalis
ENSOCUG00000009864	SNRNP200	95	98.660	ENSSARG00000010728	SNRNP200	96	98.660	Sorex_araneus
ENSOCUG00000009864	SNRNP200	100	97.378	ENSSPUG00000003726	-	100	97.378	Sphenodon_punctatus
ENSOCUG00000009864	SNRNP200	99	90.747	ENSSPAG00000001842	snrnp200	99	90.637	Stegastes_partitus
ENSOCUG00000009864	SNRNP200	100	99.579	ENSSSCG00000008127	SNRNP200	100	99.579	Sus_scrofa
ENSOCUG00000009864	SNRNP200	99	87.975	ENSTGUG00000014475	-	100	87.975	Taeniopygia_guttata
ENSOCUG00000009864	SNRNP200	99	90.371	ENSTRUG00000001307	snrnp200	99	90.262	Takifugu_rubripes
ENSOCUG00000009864	SNRNP200	100	85.925	ENSTNIG00000004320	snrnp200	100	85.925	Tetraodon_nigroviridis
ENSOCUG00000009864	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSOCUG00000009864	SNRNP200	100	99.391	ENSTTRG00000004983	SNRNP200	100	99.391	Tursiops_truncatus
ENSOCUG00000009864	SNRNP200	75	92.829	ENSUAMG00000008395	-	95	92.829	Ursus_americanus
ENSOCUG00000009864	SNRNP200	100	99.766	ENSUMAG00000012385	SNRNP200	100	99.766	Ursus_maritimus
ENSOCUG00000009864	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSOCUG00000009864	SNRNP200	100	99.533	ENSVVUG00000026247	SNRNP200	100	99.533	Vulpes_vulpes
ENSOCUG00000009864	SNRNP200	100	94.296	ENSXETG00000001243	snrnp200	100	94.296	Xenopus_tropicalis
ENSOCUG00000009864	SNRNP200	97	90.418	ENSXMAG00000002058	snrnp200	98	90.418	Xiphophorus_maculatus