EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000009867 (Gene tree)
Gene ID: 100346657
Gene Symbol: -
Alias: -
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 10839 bases
Position: chr21:12115479-12126317
Accession: 100346657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000008495	Glu-tRNAGln	PF02686.15	2.4e-10	1	1
ENSOCUP00000018769	Glu-tRNAGln	PF02686.15	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000024601	-	453	-	ENSOCUP00000018769	150 (aa)	-	G1TP39
ENSOCUT00000009865	-	411	XM_002719791	ENSOCUP00000008495	136 (aa)	XP_002719837	G1SY25

Gene Model

Click here to download ENSOCUG00000009867's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu00970	Aminoacyl-tRNA biosynthesis	KEGG
ocu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000009867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000009867	-	100	88.235	ENSG00000257218	GATC	100	95.745	Homo_sapiens
ENSOCUG00000009867	-	100	85.294	ENSAMEG00000013298	-	100	85.294	Ailuropoda_melanoleuca
ENSOCUG00000009867	-	68	65.217	ENSACIG00000016853	gatc	66	65.217	Amphilophus_citrinellus
ENSOCUG00000009867	-	74	64.356	ENSAOCG00000014641	gatc	81	64.356	Amphiprion_ocellaris
ENSOCUG00000009867	-	74	64.356	ENSAPEG00000023411	gatc	52	64.356	Amphiprion_percula
ENSOCUG00000009867	-	78	59.434	ENSATEG00000009237	gatc	88	59.434	Anabas_testudineus
ENSOCUG00000009867	-	80	64.220	ENSACAG00000002868	-	81	64.220	Anolis_carolinensis
ENSOCUG00000009867	-	100	89.706	ENSANAG00000034389	-	100	89.706	Aotus_nancymaae
ENSOCUG00000009867	-	79	62.617	ENSACLG00000026251	gatc	56	62.617	Astatotilapia_calliptera
ENSOCUG00000009867	-	99	83.704	ENSBTAG00000012791	GATC	99	83.704	Bos_taurus
ENSOCUG00000009867	-	69	43.617	WBGene00013433	Y66D12A.7	54	43.617	Caenorhabditis_elegans
ENSOCUG00000009867	-	100	88.971	ENSCJAG00000001183	-	75	88.971	Callithrix_jacchus
ENSOCUG00000009867	-	100	84.559	ENSCAFG00000010311	-	100	84.559	Canis_familiaris
ENSOCUG00000009867	-	100	84.559	ENSCAFG00020020606	-	100	84.559	Canis_lupus_dingo
ENSOCUG00000009867	-	100	83.824	ENSCHIG00000019423	-	100	83.824	Capra_hircus
ENSOCUG00000009867	-	99	85.821	ENSTSYG00000006845	-	99	85.821	Carlito_syrichta
ENSOCUG00000009867	-	92	78.169	ENSCPOG00000026436	-	97	78.169	Cavia_porcellus
ENSOCUG00000009867	-	100	88.971	ENSCCAG00000022235	-	100	88.971	Cebus_capucinus
ENSOCUG00000009867	-	100	88.235	ENSCATG00000038807	GATC	100	88.235	Cercocebus_atys
ENSOCUG00000009867	-	90	76.761	ENSCLAG00000011015	-	89	76.761	Chinchilla_lanigera
ENSOCUG00000009867	-	100	87.500	ENSCSAG00000002259	GATC	100	87.500	Chlorocebus_sabaeus
ENSOCUG00000009867	-	99	80.741	ENSCHOG00000009235	-	99	80.741	Choloepus_hoffmanni
ENSOCUG00000009867	-	76	70.874	ENSCPBG00000011342	-	55	70.874	Chrysemys_picta_bellii
ENSOCUG00000009867	-	100	86.029	ENSCANG00000031071	GATC	100	86.029	Colobus_angolensis_palliatus
ENSOCUG00000009867	-	99	63.816	ENSCGRG00001019220	-	98	63.816	Cricetulus_griseus_chok1gshd
ENSOCUG00000009867	-	99	60.526	ENSCGRG00001005508	-	68	68.345	Cricetulus_griseus_chok1gshd
ENSOCUG00000009867	-	99	59.868	ENSCGRG00000019471	GATC	68	67.626	Cricetulus_griseus_crigri
ENSOCUG00000009867	-	99	63.816	ENSCGRG00000004184	-	98	63.816	Cricetulus_griseus_crigri
ENSOCUG00000009867	-	83	52.212	ENSCSEG00000016618	-	66	52.212	Cynoglossus_semilaevis
ENSOCUG00000009867	-	78	56.604	ENSCSEG00000007798	gatc	53	56.604	Cynoglossus_semilaevis
ENSOCUG00000009867	-	74	64.000	ENSCVAG00000004364	gatc	53	64.000	Cyprinodon_variegatus
ENSOCUG00000009867	-	82	60.714	ENSDARG00000056855	gatc	61	60.714	Danio_rerio
ENSOCUG00000009867	-	97	76.000	ENSDNOG00000012593	-	91	76.000	Dasypus_novemcinctus
ENSOCUG00000009867	-	69	46.809	FBgn0064115	GatC	78	38.793	Drosophila_melanogaster
ENSOCUG00000009867	-	96	68.702	ENSETEG00000002604	-	96	68.702	Echinops_telfairi
ENSOCUG00000009867	-	72	46.939	ENSEBUG00000008772	gatc	56	46.939	Eptatretus_burgeri
ENSOCUG00000009867	-	100	88.235	ENSECAG00000011118	-	100	88.235	Equus_caballus
ENSOCUG00000009867	-	96	74.615	ENSEEUG00000011638	-	96	74.615	Erinaceus_europaeus
ENSOCUG00000009867	-	74	62.376	ENSELUG00000012608	gatc	74	62.376	Esox_lucius
ENSOCUG00000009867	-	100	84.559	ENSFCAG00000038718	-	100	84.559	Felis_catus
ENSOCUG00000009867	-	96	57.447	ENSFALG00000007564	-	93	57.447	Ficedula_albicollis
ENSOCUG00000009867	-	100	80.147	ENSFDAG00000018720	-	100	80.147	Fukomys_damarensis
ENSOCUG00000009867	-	76	60.194	ENSFHEG00000014992	GATC	55	60.194	Fundulus_heteroclitus
ENSOCUG00000009867	-	76	57.692	ENSGMOG00000008742	gatc	65	57.692	Gadus_morhua
ENSOCUG00000009867	-	75	66.667	ENSGALG00000007195	-	86	57.692	Gallus_gallus
ENSOCUG00000009867	-	76	60.194	ENSGAFG00000012801	gatc	65	60.194	Gambusia_affinis
ENSOCUG00000009867	-	75	62.745	ENSGACG00000008973	gatc	53	62.745	Gasterosteus_aculeatus
ENSOCUG00000009867	-	76	72.816	ENSGAGG00000016018	-	82	54.362	Gopherus_agassizii
ENSOCUG00000009867	-	89	89.256	ENSGGOG00000026821	GATC	94	89.256	Gorilla_gorilla
ENSOCUG00000009867	-	79	62.617	ENSHBUG00000006827	gatc	56	62.617	Haplochromis_burtoni
ENSOCUG00000009867	-	100	83.088	ENSHGLG00000011394	GATC	100	83.088	Heterocephalus_glaber_female
ENSOCUG00000009867	-	100	80.147	ENSHGLG00100018850	-	100	80.147	Heterocephalus_glaber_male
ENSOCUG00000009867	-	74	65.347	ENSHCOG00000009209	gatc	80	65.347	Hippocampus_comes
ENSOCUG00000009867	-	76	66.990	ENSIPUG00000023072	gatc	65	56.589	Ictalurus_punctatus
ENSOCUG00000009867	-	99	82.090	ENSSTOG00000025740	-	88	82.090	Ictidomys_tridecemlineatus
ENSOCUG00000009867	-	93	67.568	ENSJJAG00000000369	Gatc	94	67.568	Jaculus_jaculus
ENSOCUG00000009867	-	74	60.000	ENSKMAG00000016476	gatc	80	60.000	Kryptolebias_marmoratus
ENSOCUG00000009867	-	71	65.625	ENSLBEG00000007603	gatc	53	65.625	Labrus_bergylta
ENSOCUG00000009867	-	75	67.647	ENSLACG00000018239	-	53	67.647	Latimeria_chalumnae
ENSOCUG00000009867	-	82	60.714	ENSLOCG00000004056	gatc	72	51.095	Lepisosteus_oculatus
ENSOCUG00000009867	-	95	78.767	ENSLAFG00000006384	-	95	78.767	Loxodonta_africana
ENSOCUG00000009867	-	100	88.235	ENSMFAG00000034197	GATC	100	88.235	Macaca_fascicularis
ENSOCUG00000009867	-	100	88.235	ENSMMUG00000046665	GATC	100	88.235	Macaca_mulatta
ENSOCUG00000009867	-	100	88.235	ENSMNEG00000034653	GATC	100	88.235	Macaca_nemestrina
ENSOCUG00000009867	-	100	87.500	ENSMLEG00000039862	GATC	100	87.500	Mandrillus_leucophaeus
ENSOCUG00000009867	-	74	66.000	ENSMAMG00000015851	gatc	55	66.000	Mastacembelus_armatus
ENSOCUG00000009867	-	79	62.617	ENSMZEG00005016072	gatc	56	62.617	Maylandia_zebra
ENSOCUG00000009867	-	75	67.647	ENSMGAG00000008733	-	96	67.647	Meleagris_gallopavo
ENSOCUG00000009867	-	99	63.816	ENSMAUG00000012756	Gatc	98	63.816	Mesocricetus_auratus
ENSOCUG00000009867	-	100	90.441	ENSMICG00000008669	-	100	90.441	Microcebus_murinus
ENSOCUG00000009867	-	90	70.504	ENSMOCG00000005051	Gatc	90	70.504	Microtus_ochrogaster
ENSOCUG00000009867	-	83	52.212	ENSMMOG00000017695	gatc	83	59.596	Mola_mola
ENSOCUG00000009867	-	93	68.750	ENSMODG00000003152	-	96	68.750	Monodelphis_domestica
ENSOCUG00000009867	-	90	69.784	MGP_CAROLIEiJ_G0027623	Gatc	90	69.784	Mus_caroli
ENSOCUG00000009867	-	90	71.223	ENSMUSG00000029536	Gatc	90	71.223	Mus_musculus
ENSOCUG00000009867	-	90	68.345	MGP_PahariEiJ_G0024203	Gatc	94	64.828	Mus_pahari
ENSOCUG00000009867	-	90	71.223	MGP_SPRETEiJ_G0028621	Gatc	90	71.223	Mus_spretus
ENSOCUG00000009867	-	100	86.029	ENSMPUG00000003183	-	100	86.029	Mustela_putorius_furo
ENSOCUG00000009867	-	72	87.755	ENSMLUG00000010341	-	97	87.755	Myotis_lucifugus
ENSOCUG00000009867	-	89	71.631	ENSNGAG00000004734	Gatc	93	70.423	Nannospalax_galili
ENSOCUG00000009867	-	79	62.617	ENSNBRG00000007810	gatc	56	62.617	Neolamprologus_brichardi
ENSOCUG00000009867	-	100	86.029	ENSNLEG00000015651	GATC	100	86.029	Nomascus_leucogenys
ENSOCUG00000009867	-	81	70.000	ENSMEUG00000004064	-	93	67.826	Notamacropus_eugenii
ENSOCUG00000009867	-	100	84.559	ENSOPRG00000004226	-	100	84.559	Ochotona_princeps
ENSOCUG00000009867	-	88	79.200	ENSODEG00000005919	-	91	79.200	Octodon_degus
ENSOCUG00000009867	-	79	60.550	ENSONIG00000013444	gatc	75	60.550	Oreochromis_niloticus
ENSOCUG00000009867	-	75	60.784	ENSORLG00000007156	gatc	85	66.667	Oryzias_latipes
ENSOCUG00000009867	-	76	59.615	ENSORLG00020014991	gatc	55	59.615	Oryzias_latipes_hni
ENSOCUG00000009867	-	76	60.577	ENSORLG00015003450	gatc	55	60.577	Oryzias_latipes_hsok
ENSOCUG00000009867	-	76	60.194	ENSOMEG00000002280	gatc	55	60.194	Oryzias_melastigma
ENSOCUG00000009867	-	80	87.156	ENSOGAG00000003850	-	100	87.156	Otolemur_garnettii
ENSOCUG00000009867	-	100	76.471	ENSOARG00000012338	-	100	76.471	Ovis_aries
ENSOCUG00000009867	-	100	87.500	ENSPPAG00000029164	GATC	100	87.500	Pan_paniscus
ENSOCUG00000009867	-	100	86.029	ENSPPRG00000000929	-	100	86.029	Panthera_pardus
ENSOCUG00000009867	-	100	86.029	ENSPTIG00000009889	-	100	86.029	Panthera_tigris_altaica
ENSOCUG00000009867	-	100	87.500	ENSPTRG00000049887	GATC	100	87.500	Pan_troglodytes
ENSOCUG00000009867	-	100	87.500	ENSPANG00000033975	GATC	100	87.500	Papio_anubis
ENSOCUG00000009867	-	74	60.396	ENSPKIG00000024856	gatc	52	60.396	Paramormyrops_kingsleyae
ENSOCUG00000009867	-	75	69.608	ENSPSIG00000011112	-	87	69.608	Pelodiscus_sinensis
ENSOCUG00000009867	-	75	63.725	ENSPMGG00000018829	gatc	65	63.725	Periophthalmus_magnuspinnatus
ENSOCUG00000009867	-	90	71.942	ENSPEMG00000000665	Gatc	90	71.942	Peromyscus_maniculatus_bairdii
ENSOCUG00000009867	-	93	62.162	ENSPCIG00000025999	-	94	62.162	Phascolarctos_cinereus
ENSOCUG00000009867	-	74	64.000	ENSPFOG00000011603	gatc	54	64.000	Poecilia_formosa
ENSOCUG00000009867	-	74	63.000	ENSPLAG00000002471	gatc	54	63.000	Poecilia_latipinna
ENSOCUG00000009867	-	74	64.000	ENSPMEG00000020958	gatc	54	64.000	Poecilia_mexicana
ENSOCUG00000009867	-	82	58.929	ENSPREG00000022256	gatc	91	55.224	Poecilia_reticulata
ENSOCUG00000009867	-	100	86.029	ENSPPYG00000005030	GATC	100	86.029	Pongo_abelii
ENSOCUG00000009867	-	100	83.824	ENSPCAG00000013864	-	100	83.824	Procavia_capensis
ENSOCUG00000009867	-	99	79.104	ENSPCOG00000015558	-	98	79.104	Propithecus_coquereli
ENSOCUG00000009867	-	88	92.500	ENSPCOG00000009493	-	93	92.500	Propithecus_coquereli
ENSOCUG00000009867	-	100	82.353	ENSPVAG00000002228	-	100	82.353	Pteropus_vampyrus
ENSOCUG00000009867	-	79	62.617	ENSPNYG00000016015	gatc	56	62.617	Pundamilia_nyererei
ENSOCUG00000009867	-	89	66.667	ENSRNOG00000045621	Gatc	90	66.667	Rattus_norvegicus
ENSOCUG00000009867	-	93	64.138	ENSRNOG00000001161	Gatc	94	64.138	Rattus_norvegicus
ENSOCUG00000009867	-	100	86.029	ENSRBIG00000033363	GATC	100	86.029	Rhinopithecus_bieti
ENSOCUG00000009867	-	100	86.029	ENSRROG00000042802	GATC	100	86.029	Rhinopithecus_roxellana
ENSOCUG00000009867	-	100	88.971	ENSSBOG00000033750	-	100	88.971	Saimiri_boliviensis_boliviensis
ENSOCUG00000009867	-	78	73.585	ENSSHAG00000005745	-	100	73.585	Sarcophilus_harrisii
ENSOCUG00000009867	-	78	56.604	ENSSFOG00015002508	gatc	58	59.341	Scleropages_formosus
ENSOCUG00000009867	-	74	65.347	ENSSMAG00000014280	gatc	56	65.347	Scophthalmus_maximus
ENSOCUG00000009867	-	76	63.462	ENSSDUG00000012206	gatc	53	63.462	Seriola_dumerili
ENSOCUG00000009867	-	76	63.462	ENSSLDG00000025159	gatc	53	63.462	Seriola_lalandi_dorsalis
ENSOCUG00000009867	-	78	67.925	ENSSPUG00000015693	-	76	67.925	Sphenodon_punctatus
ENSOCUG00000009867	-	76	62.500	ENSSPAG00000011860	gatc	54	62.500	Stegastes_partitus
ENSOCUG00000009867	-	88	89.167	ENSSSCG00000032747	-	88	89.167	Sus_scrofa
ENSOCUG00000009867	-	76	69.903	ENSTGUG00000009561	-	95	69.903	Taeniopygia_guttata
ENSOCUG00000009867	-	99	87.407	ENSTTRG00000000144	GATC	99	87.407	Tursiops_truncatus
ENSOCUG00000009867	-	100	86.029	ENSUAMG00000015523	-	100	86.029	Ursus_americanus
ENSOCUG00000009867	-	100	83.824	ENSVVUG00000021055	-	100	83.824	Vulpes_vulpes
ENSOCUG00000009867	-	74	65.000	ENSXCOG00000017087	gatc	73	65.000	Xiphophorus_couchianus
ENSOCUG00000009867	-	74	65.000	ENSXMAG00000018267	gatc	54	65.000	Xiphophorus_maculatus