EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000009875 (Gene tree)
Gene ID: 100345642
Gene Symbol: TSEN54
Alias: -
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 6009 bases
Position: chrGL018845:238915-244923
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000008506	tRNA_int_end_N2	PF12928.7	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000009876	TSEN54-201	1551	-	ENSOCUP00000008506	516 (aa)	-	G1SY33

Gene Model

Click here to download ENSOCUG00000009875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000009875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000009875	TSEN54	99	77.298	ENSG00000182173	TSEN54	100	88.889	Homo_sapiens
ENSOCUG00000009875	TSEN54	97	43.436	ENSAPOG00000009659	tsen54	99	42.553	Acanthochromis_polyacanthus
ENSOCUG00000009875	TSEN54	99	73.371	ENSAMEG00000009414	TSEN54	99	73.371	Ailuropoda_melanoleuca
ENSOCUG00000009875	TSEN54	97	43.436	ENSAOCG00000000152	tsen54	95	42.447	Amphiprion_ocellaris
ENSOCUG00000009875	TSEN54	97	42.664	ENSAPEG00000018931	tsen54	94	42.065	Amphiprion_percula
ENSOCUG00000009875	TSEN54	97	38.710	ENSATEG00000019860	tsen54	97	39.048	Anabas_testudineus
ENSOCUG00000009875	TSEN54	84	51.168	ENSAPLG00000009419	TSEN54	100	49.679	Anas_platyrhynchos
ENSOCUG00000009875	TSEN54	99	49.444	ENSACAG00000006714	TSEN54	99	48.148	Anolis_carolinensis
ENSOCUG00000009875	TSEN54	99	76.660	ENSANAG00000024061	TSEN54	99	76.735	Aotus_nancymaae
ENSOCUG00000009875	TSEN54	97	42.166	ENSACLG00000019800	tsen54	96	42.125	Astatotilapia_calliptera
ENSOCUG00000009875	TSEN54	97	43.678	ENSAMXG00000006546	tsen54	96	43.870	Astyanax_mexicanus
ENSOCUG00000009875	TSEN54	99	73.606	ENSBTAG00000000824	TSEN54	99	73.606	Bos_taurus
ENSOCUG00000009875	TSEN54	99	76.281	ENSCJAG00000014278	TSEN54	99	76.360	Callithrix_jacchus
ENSOCUG00000009875	TSEN54	99	75.836	ENSCAFG00000004798	TSEN54	99	75.836	Canis_familiaris
ENSOCUG00000009875	TSEN54	99	75.836	ENSCAFG00020000312	TSEN54	99	75.836	Canis_lupus_dingo
ENSOCUG00000009875	TSEN54	99	72.420	ENSCHIG00000019908	TSEN54	99	70.919	Capra_hircus
ENSOCUG00000009875	TSEN54	84	75.165	ENSTSYG00000037439	TSEN54	100	75.165	Carlito_syrichta
ENSOCUG00000009875	TSEN54	99	76.660	ENSCCAG00000036624	TSEN54	99	76.735	Cebus_capucinus
ENSOCUG00000009875	TSEN54	97	77.308	ENSCATG00000042877	TSEN54	99	77.715	Cercocebus_atys
ENSOCUG00000009875	TSEN54	97	74.231	ENSCLAG00000002924	TSEN54	99	73.408	Chinchilla_lanigera
ENSOCUG00000009875	TSEN54	99	77.486	ENSCSAG00000004809	TSEN54	99	77.486	Chlorocebus_sabaeus
ENSOCUG00000009875	TSEN54	99	51.273	ENSCPBG00000028071	TSEN54	99	50.000	Chrysemys_picta_bellii
ENSOCUG00000009875	TSEN54	99	76.360	ENSCANG00000028053	TSEN54	99	76.360	Colobus_angolensis_palliatus
ENSOCUG00000009875	TSEN54	99	72.795	ENSCGRG00001020029	Tsen54	99	71.482	Cricetulus_griseus_chok1gshd
ENSOCUG00000009875	TSEN54	82	71.946	ENSCGRG00000016289	Tsen54	99	70.362	Cricetulus_griseus_crigri
ENSOCUG00000009875	TSEN54	78	38.462	ENSCSEG00000020586	tsen54	99	38.283	Cynoglossus_semilaevis
ENSOCUG00000009875	TSEN54	78	42.824	ENSDARG00000036844	tsen54	99	43.059	Danio_rerio
ENSOCUG00000009875	TSEN54	99	74.721	ENSDNOG00000018452	TSEN54	99	74.721	Dasypus_novemcinctus
ENSOCUG00000009875	TSEN54	99	73.734	ENSDORG00000004073	Tsen54	99	72.983	Dipodomys_ordii
ENSOCUG00000009875	TSEN54	97	34.935	ENSEBUG00000005203	TSEN54	95	34.935	Eptatretus_burgeri
ENSOCUG00000009875	TSEN54	99	75.279	ENSEASG00005000579	TSEN54	99	74.349	Equus_asinus_asinus
ENSOCUG00000009875	TSEN54	99	75.465	ENSECAG00000004924	TSEN54	99	74.535	Equus_caballus
ENSOCUG00000009875	TSEN54	84	71.053	ENSEEUG00000008467	TSEN54	100	71.053	Erinaceus_europaeus
ENSOCUG00000009875	TSEN54	98	40.255	ENSELUG00000017703	tsen54	91	40.619	Esox_lucius
ENSOCUG00000009875	TSEN54	99	75.560	ENSFCAG00000023712	TSEN54	99	75.560	Felis_catus
ENSOCUG00000009875	TSEN54	94	50.791	ENSFALG00000001119	TSEN54	99	49.630	Ficedula_albicollis
ENSOCUG00000009875	TSEN54	84	74.336	ENSFDAG00000019090	TSEN54	99	73.451	Fukomys_damarensis
ENSOCUG00000009875	TSEN54	97	43.702	ENSFHEG00000005470	tsen54	96	42.144	Fundulus_heteroclitus
ENSOCUG00000009875	TSEN54	81	41.991	ENSGMOG00000013146	tsen54	94	42.424	Gadus_morhua
ENSOCUG00000009875	TSEN54	93	47.758	ENSGALG00000047163	TSEN54	97	46.562	Gallus_gallus
ENSOCUG00000009875	TSEN54	99	43.762	ENSGAFG00000005111	tsen54	99	43.774	Gambusia_affinis
ENSOCUG00000009875	TSEN54	96	42.035	ENSGACG00000014987	tsen54	99	42.085	Gasterosteus_aculeatus
ENSOCUG00000009875	TSEN54	99	51.087	ENSGAGG00000006825	TSEN54	99	50.182	Gopherus_agassizii
ENSOCUG00000009875	TSEN54	97	76.744	ENSGGOG00000009417	TSEN54	100	76.744	Gorilla_gorilla
ENSOCUG00000009875	TSEN54	87	40.385	ENSHBUG00000018296	tsen54	99	36.580	Haplochromis_burtoni
ENSOCUG00000009875	TSEN54	99	75.985	ENSHGLG00000007979	TSEN54	99	74.859	Heterocephalus_glaber_female
ENSOCUG00000009875	TSEN54	99	75.235	ENSHGLG00100005497	TSEN54	99	73.734	Heterocephalus_glaber_male
ENSOCUG00000009875	TSEN54	78	39.545	ENSHCOG00000007481	tsen54	56	43.478	Hippocampus_comes
ENSOCUG00000009875	TSEN54	99	38.674	ENSIPUG00000000590	tsen54	99	38.858	Ictalurus_punctatus
ENSOCUG00000009875	TSEN54	99	72.316	ENSSTOG00000012883	TSEN54	99	71.940	Ictidomys_tridecemlineatus
ENSOCUG00000009875	TSEN54	99	74.206	ENSJJAG00000007365	Tsen54	99	72.897	Jaculus_jaculus
ENSOCUG00000009875	TSEN54	97	42.322	ENSKMAG00000006944	tsen54	97	41.353	Kryptolebias_marmoratus
ENSOCUG00000009875	TSEN54	97	40.971	ENSLBEG00000004199	tsen54	97	40.812	Labrus_bergylta
ENSOCUG00000009875	TSEN54	97	43.619	ENSLACG00000009497	TSEN54	100	43.429	Latimeria_chalumnae
ENSOCUG00000009875	TSEN54	98	44.776	ENSLOCG00000011191	tsen54	98	43.831	Lepisosteus_oculatus
ENSOCUG00000009875	TSEN54	99	68.773	ENSLAFG00000011655	TSEN54	99	68.773	Loxodonta_africana
ENSOCUG00000009875	TSEN54	99	77.674	ENSMFAG00000000712	TSEN54	99	77.674	Macaca_fascicularis
ENSOCUG00000009875	TSEN54	99	77.486	ENSMNEG00000029199	TSEN54	99	77.486	Macaca_nemestrina
ENSOCUG00000009875	TSEN54	86	76.344	ENSMLEG00000044168	TSEN54	88	77.313	Mandrillus_leucophaeus
ENSOCUG00000009875	TSEN54	97	42.166	ENSMZEG00005000884	tsen54	96	42.125	Maylandia_zebra
ENSOCUG00000009875	TSEN54	97	47.850	ENSMGAG00000009556	TSEN54	97	46.704	Meleagris_gallopavo
ENSOCUG00000009875	TSEN54	99	72.795	ENSMAUG00000016838	Tsen54	99	71.482	Mesocricetus_auratus
ENSOCUG00000009875	TSEN54	99	75.985	ENSMICG00000044012	TSEN54	99	75.985	Microcebus_murinus
ENSOCUG00000009875	TSEN54	99	73.358	ENSMOCG00000021585	Tsen54	99	71.857	Microtus_ochrogaster
ENSOCUG00000009875	TSEN54	96	37.911	ENSMMOG00000020189	tsen54	98	39.575	Mola_mola
ENSOCUG00000009875	TSEN54	98	60.628	ENSMODG00000007438	TSEN54	98	60.727	Monodelphis_domestica
ENSOCUG00000009875	TSEN54	98	42.026	ENSMALG00000020573	tsen54	98	42.214	Monopterus_albus
ENSOCUG00000009875	TSEN54	99	71.107	MGP_CAROLIEiJ_G0017417	Tsen54	99	69.981	Mus_caroli
ENSOCUG00000009875	TSEN54	99	71.857	ENSMUSG00000020781	Tsen54	99	70.732	Mus_musculus
ENSOCUG00000009875	TSEN54	99	71.670	MGP_PahariEiJ_G0018547	Tsen54	99	70.544	Mus_pahari
ENSOCUG00000009875	TSEN54	99	72.045	MGP_SPRETEiJ_G0018262	Tsen54	99	70.919	Mus_spretus
ENSOCUG00000009875	TSEN54	99	74.349	ENSMPUG00000013870	TSEN54	99	74.349	Mustela_putorius_furo
ENSOCUG00000009875	TSEN54	99	71.747	ENSMLUG00000015298	TSEN54	99	71.747	Myotis_lucifugus
ENSOCUG00000009875	TSEN54	99	72.983	ENSNGAG00000015673	Tsen54	99	71.482	Nannospalax_galili
ENSOCUG00000009875	TSEN54	88	57.684	ENSMEUG00000011908	TSEN54	100	57.684	Notamacropus_eugenii
ENSOCUG00000009875	TSEN54	99	71.348	ENSOPRG00000012513	TSEN54	99	71.348	Ochotona_princeps
ENSOCUG00000009875	TSEN54	97	43.077	ENSONIG00000009543	tsen54	96	42.614	Oreochromis_niloticus
ENSOCUG00000009875	TSEN54	97	44.533	ENSORLG00000000852	tsen54	97	42.085	Oryzias_latipes
ENSOCUG00000009875	TSEN54	97	44.250	ENSORLG00020018221	tsen54	97	42.664	Oryzias_latipes_hni
ENSOCUG00000009875	TSEN54	97	44.272	ENSORLG00015009413	tsen54	98	42.664	Oryzias_latipes_hsok
ENSOCUG00000009875	TSEN54	97	45.136	ENSOMEG00000014402	tsen54	94	44.466	Oryzias_melastigma
ENSOCUG00000009875	TSEN54	99	71.107	ENSOGAG00000001442	TSEN54	99	71.107	Otolemur_garnettii
ENSOCUG00000009875	TSEN54	84	72.210	ENSOARG00000010361	TSEN54	100	72.210	Ovis_aries
ENSOCUG00000009875	TSEN54	94	75.000	ENSPPAG00000043519	TSEN54	99	75.397	Pan_paniscus
ENSOCUG00000009875	TSEN54	99	75.560	ENSPPRG00000009162	TSEN54	99	75.560	Panthera_pardus
ENSOCUG00000009875	TSEN54	84	75.110	ENSPTIG00000019312	TSEN54	97	75.110	Panthera_tigris_altaica
ENSOCUG00000009875	TSEN54	99	76.735	ENSPTRG00000009646	TSEN54	99	76.923	Pan_troglodytes
ENSOCUG00000009875	TSEN54	99	77.486	ENSPANG00000020133	TSEN54	99	77.486	Papio_anubis
ENSOCUG00000009875	TSEN54	97	41.906	ENSPKIG00000023018	tsen54	100	42.466	Paramormyrops_kingsleyae
ENSOCUG00000009875	TSEN54	78	48.741	ENSPSIG00000012807	TSEN54	99	48.380	Pelodiscus_sinensis
ENSOCUG00000009875	TSEN54	92	34.623	ENSPMGG00000019578	tsen54	99	34.568	Periophthalmus_magnuspinnatus
ENSOCUG00000009875	TSEN54	99	72.795	ENSPEMG00000014857	Tsen54	99	71.482	Peromyscus_maniculatus_bairdii
ENSOCUG00000009875	TSEN54	99	44.301	ENSPFOG00000022740	tsen54	99	44.090	Poecilia_formosa
ENSOCUG00000009875	TSEN54	99	44.177	ENSPLAG00000014847	tsen54	99	43.962	Poecilia_latipinna
ENSOCUG00000009875	TSEN54	99	43.762	ENSPMEG00000022876	tsen54	99	43.774	Poecilia_mexicana
ENSOCUG00000009875	TSEN54	98	44.007	ENSPREG00000013090	tsen54	98	43.643	Poecilia_reticulata
ENSOCUG00000009875	TSEN54	91	71.047	ENSPPYG00000008629	TSEN54	100	70.697	Pongo_abelii
ENSOCUG00000009875	TSEN54	95	64.008	ENSPCAG00000002093	TSEN54	99	64.008	Procavia_capensis
ENSOCUG00000009875	TSEN54	99	76.792	ENSPCOG00000027880	TSEN54	99	76.792	Propithecus_coquereli
ENSOCUG00000009875	TSEN54	99	75.279	ENSPVAG00000008446	TSEN54	99	75.279	Pteropus_vampyrus
ENSOCUG00000009875	TSEN54	92	42.084	ENSPNYG00000010217	tsen54	99	41.584	Pundamilia_nyererei
ENSOCUG00000009875	TSEN54	99	42.804	ENSPNAG00000003770	tsen54	98	42.672	Pygocentrus_nattereri
ENSOCUG00000009875	TSEN54	99	72.608	ENSRNOG00000004598	Tsen54	99	71.295	Rattus_norvegicus
ENSOCUG00000009875	TSEN54	99	76.923	ENSRBIG00000043040	TSEN54	99	76.923	Rhinopithecus_bieti
ENSOCUG00000009875	TSEN54	99	76.548	ENSRROG00000030797	TSEN54	99	76.548	Rhinopithecus_roxellana
ENSOCUG00000009875	TSEN54	99	73.734	ENSSBOG00000013543	TSEN54	99	73.734	Saimiri_boliviensis_boliviensis
ENSOCUG00000009875	TSEN54	99	60.110	ENSSHAG00000018127	TSEN54	98	60.110	Sarcophilus_harrisii
ENSOCUG00000009875	TSEN54	79	42.991	ENSSFOG00015004093	tsen54	100	42.523	Scleropages_formosus
ENSOCUG00000009875	TSEN54	97	41.176	ENSSMAG00000012449	tsen54	99	40.840	Scophthalmus_maximus
ENSOCUG00000009875	TSEN54	97	42.830	ENSSDUG00000021506	tsen54	97	43.186	Seriola_dumerili
ENSOCUG00000009875	TSEN54	97	42.639	ENSSLDG00000016303	tsen54	97	42.994	Seriola_lalandi_dorsalis
ENSOCUG00000009875	TSEN54	78	50.469	ENSSPUG00000008988	TSEN54	99	48.764	Sphenodon_punctatus
ENSOCUG00000009875	TSEN54	92	42.254	ENSSPAG00000008098	-	77	59.459	Stegastes_partitus
ENSOCUG00000009875	TSEN54	78	39.151	ENSSPAG00000008047	tsen54	77	59.459	Stegastes_partitus
ENSOCUG00000009875	TSEN54	99	74.164	ENSSSCG00000036852	TSEN54	99	74.164	Sus_scrofa
ENSOCUG00000009875	TSEN54	84	50.441	ENSTGUG00000008548	TSEN54	100	49.779	Taeniopygia_guttata
ENSOCUG00000009875	TSEN54	97	42.085	ENSTRUG00000004230	tsen54	96	41.473	Takifugu_rubripes
ENSOCUG00000009875	TSEN54	84	74.454	ENSTTRG00000015828	TSEN54	100	74.454	Tursiops_truncatus
ENSOCUG00000009875	TSEN54	79	73.427	ENSUAMG00000010045	TSEN54	100	73.427	Ursus_americanus
ENSOCUG00000009875	TSEN54	82	74.550	ENSUMAG00000008979	TSEN54	100	74.550	Ursus_maritimus
ENSOCUG00000009875	TSEN54	97	75.432	ENSVVUG00000011411	TSEN54	98	75.335	Vulpes_vulpes
ENSOCUG00000009875	TSEN54	99	46.468	ENSXETG00000012532	tsen54	99	63.281	Xenopus_tropicalis
ENSOCUG00000009875	TSEN54	97	40.000	ENSXCOG00000018245	tsen54	99	40.388	Xiphophorus_couchianus
ENSOCUG00000009875	TSEN54	99	43.843	ENSXMAG00000018818	tsen54	99	43.585	Xiphophorus_maculatus