EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000009895 (Gene tree)
Gene ID: 100351241
Gene Symbol: -
Alias: -
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 10864 bases
Position: chr6:11665725-11676588
Accession: 100351241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000008522	THUMP	PF02926.17	1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000009896	-	5984	XM_002711832	ENSOCUP00000008522	352 (aa)	XP_002711878	G1SY47

Gene Model

Click here to download ENSOCUG00000009895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000009895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000009895	-	62	94.495	ENSOCUG00000025354	-	100	94.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000009895	-	98	88.184	ENSG00000066654	THUMPD1	98	88.184	Homo_sapiens
ENSOCUG00000009895	-	86	53.922	ENSAPOG00000008440	thumpd1	94	54.248	Acanthochromis_polyacanthus
ENSOCUG00000009895	-	97	87.679	ENSAMEG00000006257	THUMPD1	96	87.679	Ailuropoda_melanoleuca
ENSOCUG00000009895	-	75	61.742	ENSACIG00000024395	thumpd1	79	61.742	Amphilophus_citrinellus
ENSOCUG00000009895	-	79	56.940	ENSAOCG00000003509	thumpd1	84	57.706	Amphiprion_ocellaris
ENSOCUG00000009895	-	79	56.940	ENSAPEG00000010515	thumpd1	84	57.706	Amphiprion_percula
ENSOCUG00000009895	-	86	55.263	ENSATEG00000004737	thumpd1	95	55.263	Anabas_testudineus
ENSOCUG00000009895	-	70	79.435	ENSAPLG00000015259	THUMPD1	87	80.645	Anas_platyrhynchos
ENSOCUG00000009895	-	52	66.120	ENSACAG00000022881	-	97	66.120	Anolis_carolinensis
ENSOCUG00000009895	-	81	65.753	ENSACAG00000009625	-	89	68.729	Anolis_carolinensis
ENSOCUG00000009895	-	99	70.000	ENSANAG00000027311	-	100	70.000	Aotus_nancymaae
ENSOCUG00000009895	-	97	71.014	ENSANAG00000027040	-	97	71.014	Aotus_nancymaae
ENSOCUG00000009895	-	97	87.536	ENSANAG00000026882	-	97	87.536	Aotus_nancymaae
ENSOCUG00000009895	-	73	58.755	ENSACLG00000004830	thumpd1	79	59.375	Astatotilapia_calliptera
ENSOCUG00000009895	-	75	61.742	ENSAMXG00000012356	thumpd1	80	61.194	Astyanax_mexicanus
ENSOCUG00000009895	-	97	88.218	ENSBTAG00000047673	THUMPD1	97	88.218	Bos_taurus
ENSOCUG00000009895	-	96	87.059	ENSCJAG00000009499	THUMPD1	98	86.705	Callithrix_jacchus
ENSOCUG00000009895	-	97	86.819	ENSCAFG00000017985	THUMPD1	97	86.819	Canis_familiaris
ENSOCUG00000009895	-	97	86.819	ENSCAFG00020021861	THUMPD1	97	86.819	Canis_lupus_dingo
ENSOCUG00000009895	-	97	87.644	ENSCHIG00000010134	THUMPD1	97	87.644	Capra_hircus
ENSOCUG00000009895	-	97	86.416	ENSTSYG00000011537	THUMPD1	97	86.416	Carlito_syrichta
ENSOCUG00000009895	-	96	84.164	ENSCPOG00000008919	-	97	84.104	Cavia_porcellus
ENSOCUG00000009895	-	96	84.164	ENSCPOG00000023684	-	97	84.104	Cavia_porcellus
ENSOCUG00000009895	-	97	80.000	ENSCCAG00000019379	-	84	80.000	Cebus_capucinus
ENSOCUG00000009895	-	97	86.667	ENSCCAG00000030205	THUMPD1	97	86.667	Cebus_capucinus
ENSOCUG00000009895	-	98	87.608	ENSCATG00000040309	THUMPD1	98	87.608	Cercocebus_atys
ENSOCUG00000009895	-	97	71.920	ENSCATG00000020844	-	97	71.920	Cercocebus_atys
ENSOCUG00000009895	-	97	84.928	ENSCLAG00000016508	THUMPD1	97	84.928	Chinchilla_lanigera
ENSOCUG00000009895	-	97	69.054	ENSCSAG00000009860	-	78	69.054	Chlorocebus_sabaeus
ENSOCUG00000009895	-	98	87.572	ENSCSAG00000007610	THUMPD1	98	87.572	Chlorocebus_sabaeus
ENSOCUG00000009895	-	97	85.100	ENSCHOG00000005587	THUMPD1	97	85.100	Choloepus_hoffmanni
ENSOCUG00000009895	-	90	72.840	ENSCPBG00000019055	THUMPD1	89	72.840	Chrysemys_picta_bellii
ENSOCUG00000009895	-	72	30.037	ENSCING00000021274	-	95	30.037	Ciona_intestinalis
ENSOCUG00000009895	-	87	75.405	ENSCANG00000035822	-	100	75.405	Colobus_angolensis_palliatus
ENSOCUG00000009895	-	87	79.153	ENSCANG00000038770	THUMPD1	100	79.153	Colobus_angolensis_palliatus
ENSOCUG00000009895	-	98	84.438	ENSCGRG00001014829	Thumpd1	98	84.438	Cricetulus_griseus_chok1gshd
ENSOCUG00000009895	-	98	84.438	ENSCGRG00000000060	Thumpd1	98	84.438	Cricetulus_griseus_crigri
ENSOCUG00000009895	-	78	57.040	ENSCSEG00000002041	thumpd1	88	57.040	Cynoglossus_semilaevis
ENSOCUG00000009895	-	79	60.839	ENSCVAG00000014960	thumpd1	87	60.839	Cyprinodon_variegatus
ENSOCUG00000009895	-	84	52.131	ENSDARG00000100264	thumpd1	86	52.131	Danio_rerio
ENSOCUG00000009895	-	97	86.533	ENSDNOG00000043510	THUMPD1	97	86.533	Dasypus_novemcinctus
ENSOCUG00000009895	-	97	82.808	ENSDORG00000028216	Thumpd1	98	82.808	Dipodomys_ordii
ENSOCUG00000009895	-	84	34.084	FBgn0035532	CG15014	89	33.962	Drosophila_melanogaster
ENSOCUG00000009895	-	96	77.971	ENSETEG00000002763	THUMPD1	84	75.833	Echinops_telfairi
ENSOCUG00000009895	-	76	43.165	ENSEBUG00000011011	THUMPD1	74	43.165	Eptatretus_burgeri
ENSOCUG00000009895	-	53	81.250	ENSEASG00005017428	-	97	81.250	Equus_asinus_asinus
ENSOCUG00000009895	-	97	86.246	ENSECAG00000005354	THUMPD1	97	86.246	Equus_caballus
ENSOCUG00000009895	-	100	80.654	ENSEEUG00000011256	THUMPD1	89	81.199	Erinaceus_europaeus
ENSOCUG00000009895	-	74	60.769	ENSELUG00000013612	thumpd1	61	62.452	Esox_lucius
ENSOCUG00000009895	-	97	87.679	ENSFCAG00000039296	THUMPD1	97	87.679	Felis_catus
ENSOCUG00000009895	-	64	79.913	ENSFALG00000014029	THUMPD1	82	81.223	Ficedula_albicollis
ENSOCUG00000009895	-	79	55.986	ENSFHEG00000013319	thumpd1	81	56.890	Fundulus_heteroclitus
ENSOCUG00000009895	-	72	61.961	ENSGMOG00000003369	thumpd1	80	61.961	Gadus_morhua
ENSOCUG00000009895	-	54	69.110	ENSGALG00000031384	-	79	69.110	Gallus_gallus
ENSOCUG00000009895	-	90	53.605	ENSGAFG00000011000	thumpd1	96	53.918	Gambusia_affinis
ENSOCUG00000009895	-	72	62.353	ENSGACG00000019511	thumpd1	78	62.353	Gasterosteus_aculeatus
ENSOCUG00000009895	-	90	72.188	ENSGAGG00000008225	THUMPD1	98	72.188	Gopherus_agassizii
ENSOCUG00000009895	-	97	87.826	ENSGGOG00000005231	-	78	87.826	Gorilla_gorilla
ENSOCUG00000009895	-	96	62.537	ENSGGOG00000043232	-	97	62.791	Gorilla_gorilla
ENSOCUG00000009895	-	73	57.198	ENSHBUG00000017996	thumpd1	79	58.984	Haplochromis_burtoni
ENSOCUG00000009895	-	97	85.260	ENSHGLG00000011001	-	97	85.260	Heterocephalus_glaber_female
ENSOCUG00000009895	-	60	72.770	ENSHGLG00000000952	-	99	72.770	Heterocephalus_glaber_female
ENSOCUG00000009895	-	60	72.770	ENSHGLG00100010577	-	99	72.770	Heterocephalus_glaber_male
ENSOCUG00000009895	-	97	85.838	ENSHGLG00100016023	THUMPD1	97	85.838	Heterocephalus_glaber_male
ENSOCUG00000009895	-	65	57.391	ENSHCOG00000008618	thumpd1	52	57.391	Hippocampus_comes
ENSOCUG00000009895	-	88	52.698	ENSIPUG00000012500	thumpd1	81	50.862	Ictalurus_punctatus
ENSOCUG00000009895	-	99	86.723	ENSSTOG00000007011	THUMPD1	100	86.723	Ictidomys_tridecemlineatus
ENSOCUG00000009895	-	97	83.478	ENSJJAG00000004295	-	97	83.478	Jaculus_jaculus
ENSOCUG00000009895	-	72	53.640	ENSKMAG00000009545	thumpd1	63	53.435	Kryptolebias_marmoratus
ENSOCUG00000009895	-	70	62.646	ENSLBEG00000009349	thumpd1	80	62.646	Labrus_bergylta
ENSOCUG00000009895	-	80	63.009	ENSLACG00000005833	THUMPD1	87	63.009	Latimeria_chalumnae
ENSOCUG00000009895	-	78	59.353	ENSLOCG00000000854	thumpd1	89	60.072	Lepisosteus_oculatus
ENSOCUG00000009895	-	97	83.954	ENSLAFG00000025838	THUMPD1	97	83.954	Loxodonta_africana
ENSOCUG00000009895	-	98	87.608	ENSMFAG00000036996	THUMPD1	98	87.608	Macaca_fascicularis
ENSOCUG00000009895	-	87	71.795	ENSMFAG00000041474	-	100	71.795	Macaca_fascicularis
ENSOCUG00000009895	-	87	71.474	ENSMMUG00000038414	-	100	71.474	Macaca_mulatta
ENSOCUG00000009895	-	98	87.608	ENSMMUG00000004225	THUMPD1	98	87.608	Macaca_mulatta
ENSOCUG00000009895	-	98	87.608	ENSMNEG00000020726	THUMPD1	98	87.608	Macaca_nemestrina
ENSOCUG00000009895	-	87	71.474	ENSMNEG00000038856	-	100	71.474	Macaca_nemestrina
ENSOCUG00000009895	-	87	71.613	ENSMLEG00000030012	-	99	71.613	Mandrillus_leucophaeus
ENSOCUG00000009895	-	98	87.320	ENSMLEG00000036436	THUMPD1	98	87.320	Mandrillus_leucophaeus
ENSOCUG00000009895	-	77	60.294	ENSMAMG00000006858	thumpd1	99	52.353	Mastacembelus_armatus
ENSOCUG00000009895	-	73	57.198	ENSMZEG00005013693	thumpd1	79	58.984	Maylandia_zebra
ENSOCUG00000009895	-	53	83.957	ENSMGAG00000010340	THUMPD1	91	83.957	Meleagris_gallopavo
ENSOCUG00000009895	-	98	83.285	ENSMAUG00000013306	Thumpd1	98	83.285	Mesocricetus_auratus
ENSOCUG00000009895	-	97	88.986	ENSMICG00000038483	-	97	88.986	Microcebus_murinus
ENSOCUG00000009895	-	98	69.364	ENSMICG00000030865	-	95	69.364	Microcebus_murinus
ENSOCUG00000009895	-	98	84.150	ENSMOCG00000003447	Thumpd1	98	84.150	Microtus_ochrogaster
ENSOCUG00000009895	-	74	58.868	ENSMMOG00000011323	thumpd1	78	58.868	Mola_mola
ENSOCUG00000009895	-	99	73.278	ENSMODG00000024776	-	99	74.656	Monodelphis_domestica
ENSOCUG00000009895	-	99	73.829	ENSMODG00000006971	-	98	74.656	Monodelphis_domestica
ENSOCUG00000009895	-	74	60.153	ENSMALG00000019522	thumpd1	83	60.153	Monopterus_albus
ENSOCUG00000009895	-	97	82.899	MGP_CAROLIEiJ_G0030382	Thumpd1	97	82.899	Mus_caroli
ENSOCUG00000009895	-	97	83.768	ENSMUSG00000030942	Thumpd1	97	83.768	Mus_musculus
ENSOCUG00000009895	-	97	82.133	MGP_PahariEiJ_G0013593	Thumpd1	97	82.133	Mus_pahari
ENSOCUG00000009895	-	89	84.112	ENSMLUG00000010547	THUMPD1	99	77.904	Myotis_lucifugus
ENSOCUG00000009895	-	96	86.471	ENSNGAG00000018643	Thumpd1	96	86.471	Nannospalax_galili
ENSOCUG00000009895	-	73	58.594	ENSNBRG00000006987	thumpd1	74	58.824	Neolamprologus_brichardi
ENSOCUG00000009895	-	98	87.320	ENSNLEG00000012369	THUMPD1	98	87.320	Nomascus_leucogenys
ENSOCUG00000009895	-	99	72.034	ENSOPRG00000011342	THUMPD1	86	72.034	Ochotona_princeps
ENSOCUG00000009895	-	97	84.393	ENSODEG00000012360	THUMPD1	98	84.393	Octodon_degus
ENSOCUG00000009895	-	73	57.198	ENSONIG00000000146	thumpd1	89	58.755	Oreochromis_niloticus
ENSOCUG00000009895	-	93	70.674	ENSOANG00000014297	THUMPD1	93	70.674	Ornithorhynchus_anatinus
ENSOCUG00000009895	-	74	59.615	ENSORLG00000027557	thumpd1	83	59.615	Oryzias_latipes
ENSOCUG00000009895	-	74	59.615	ENSORLG00020010206	thumpd1	83	59.615	Oryzias_latipes_hni
ENSOCUG00000009895	-	74	59.615	ENSORLG00015009581	thumpd1	83	59.615	Oryzias_latipes_hsok
ENSOCUG00000009895	-	74	59.459	ENSOMEG00000019361	thumpd1	78	59.459	Oryzias_melastigma
ENSOCUG00000009895	-	96	88.529	ENSOGAG00000026723	THUMPD1	96	88.529	Otolemur_garnettii
ENSOCUG00000009895	-	97	87.644	ENSOARG00000013107	THUMPD1	97	87.644	Ovis_aries
ENSOCUG00000009895	-	96	66.962	ENSPPAG00000001653	-	96	72.492	Pan_paniscus
ENSOCUG00000009895	-	98	88.184	ENSPPAG00000033818	-	79	88.184	Pan_paniscus
ENSOCUG00000009895	-	97	88.539	ENSPPRG00000014118	-	97	88.539	Panthera_pardus
ENSOCUG00000009895	-	97	87.679	ENSPTIG00000013856	-	97	87.679	Panthera_tigris_altaica
ENSOCUG00000009895	-	98	87.896	ENSPTRG00000007848	THUMPD1	79	87.896	Pan_troglodytes
ENSOCUG00000009895	-	96	65.782	ENSPTRG00000046073	-	97	65.988	Pan_troglodytes
ENSOCUG00000009895	-	87	70.968	ENSPANG00000034881	-	99	70.968	Papio_anubis
ENSOCUG00000009895	-	98	87.608	ENSPANG00000025507	THUMPD1	98	87.608	Papio_anubis
ENSOCUG00000009895	-	67	68.936	ENSPKIG00000014491	thumpd1	73	68.936	Paramormyrops_kingsleyae
ENSOCUG00000009895	-	78	76.923	ENSPSIG00000012430	THUMPD1	94	76.923	Pelodiscus_sinensis
ENSOCUG00000009895	-	73	61.069	ENSPMGG00000014479	thumpd1	90	61.450	Periophthalmus_magnuspinnatus
ENSOCUG00000009895	-	66	65.957	ENSPEMG00000002608	-	100	65.957	Peromyscus_maniculatus_bairdii
ENSOCUG00000009895	-	62	51.142	ENSPMAG00000001389	thumpd1	85	56.983	Petromyzon_marinus
ENSOCUG00000009895	-	96	75.143	ENSPCIG00000029241	THUMPD1	69	76.000	Phascolarctos_cinereus
ENSOCUG00000009895	-	84	54.426	ENSPFOG00000012649	thumpd1	94	54.754	Poecilia_formosa
ENSOCUG00000009895	-	84	54.636	ENSPLAG00000000137	thumpd1	94	54.967	Poecilia_latipinna
ENSOCUG00000009895	-	84	54.605	ENSPMEG00000007750	thumpd1	94	54.934	Poecilia_mexicana
ENSOCUG00000009895	-	74	60.456	ENSPREG00000000144	thumpd1	88	60.837	Poecilia_reticulata
ENSOCUG00000009895	-	78	85.199	ENSPPYG00000007160	-	100	85.199	Pongo_abelii
ENSOCUG00000009895	-	78	81.915	ENSPCAG00000001534	THUMPD1	100	81.915	Procavia_capensis
ENSOCUG00000009895	-	97	89.565	ENSPCOG00000024663	THUMPD1	97	89.565	Propithecus_coquereli
ENSOCUG00000009895	-	97	78.632	ENSPVAG00000005659	-	97	78.632	Pteropus_vampyrus
ENSOCUG00000009895	-	61	71.429	ENSPVAG00000003286	-	99	71.429	Pteropus_vampyrus
ENSOCUG00000009895	-	73	57.198	ENSPNYG00000007061	thumpd1	78	58.984	Pundamilia_nyererei
ENSOCUG00000009895	-	86	55.375	ENSPNAG00000024872	thumpd1	92	59.450	Pygocentrus_nattereri
ENSOCUG00000009895	-	62	78.636	ENSRNOG00000014946	AABR07005588.1	100	78.636	Rattus_norvegicus
ENSOCUG00000009895	-	87	76.221	ENSRBIG00000040136	-	100	76.221	Rhinopithecus_bieti
ENSOCUG00000009895	-	98	87.896	ENSRBIG00000040752	THUMPD1	98	87.896	Rhinopithecus_bieti
ENSOCUG00000009895	-	98	87.896	ENSRROG00000042189	THUMPD1	98	87.896	Rhinopithecus_roxellana
ENSOCUG00000009895	-	87	75.896	ENSRROG00000045699	-	100	75.896	Rhinopithecus_roxellana
ENSOCUG00000009895	-	97	86.667	ENSSBOG00000034246	THUMPD1	97	86.667	Saimiri_boliviensis_boliviensis
ENSOCUG00000009895	-	97	74.716	ENSSHAG00000003853	THUMPD1	97	74.716	Sarcophilus_harrisii
ENSOCUG00000009895	-	82	52.397	ENSSFOG00015007512	thumpd1	93	50.633	Scleropages_formosus
ENSOCUG00000009895	-	84	55.219	ENSSMAG00000000723	thumpd1	90	55.219	Scophthalmus_maximus
ENSOCUG00000009895	-	86	53.247	ENSSDUG00000014502	thumpd1	95	54.870	Seriola_dumerili
ENSOCUG00000009895	-	86	53.571	ENSSLDG00000007694	thumpd1	95	55.195	Seriola_lalandi_dorsalis
ENSOCUG00000009895	-	86	68.339	ENSSPUG00000005096	THUMPD1	97	68.966	Sphenodon_punctatus
ENSOCUG00000009895	-	84	54.808	ENSSPAG00000006993	thumpd1	97	55.272	Stegastes_partitus
ENSOCUG00000009895	-	97	88.286	ENSSSCG00000024748	THUMPD1	97	88.286	Sus_scrofa
ENSOCUG00000009895	-	73	75.000	ENSTGUG00000009247	THUMPD1	96	76.136	Taeniopygia_guttata
ENSOCUG00000009895	-	73	60.700	ENSTRUG00000015656	thumpd1	79	61.089	Takifugu_rubripes
ENSOCUG00000009895	-	73	60.700	ENSTNIG00000001584	thumpd1	84	61.089	Tetraodon_nigroviridis
ENSOCUG00000009895	-	96	88.529	ENSTBEG00000005252	THUMPD1	85	88.529	Tupaia_belangeri
ENSOCUG00000009895	-	97	88.252	ENSTTRG00000016435	THUMPD1	97	88.252	Tursiops_truncatus
ENSOCUG00000009895	-	62	73.214	ENSUAMG00000005779	-	100	73.214	Ursus_americanus
ENSOCUG00000009895	-	97	86.455	ENSVPAG00000003422	THUMPD1	97	86.455	Vicugna_pacos
ENSOCUG00000009895	-	97	87.106	ENSVVUG00000023241	THUMPD1	97	87.106	Vulpes_vulpes
ENSOCUG00000009895	-	78	58.974	ENSXETG00000005539	thumpd1	93	58.974	Xenopus_tropicalis
ENSOCUG00000009895	-	72	60.700	ENSXMAG00000026052	thumpd1	96	54.232	Xiphophorus_maculatus