EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000010396 (Gene tree)
Gene ID: 100009062
Gene Symbol: SSB
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 14230 bases
Position: chr7:109532775-109547004
Accession: 100009062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000026918	RRM_1	PF00076.22	8.6e-17	1	1
ENSOCUP00000008958	RRM_1	PF00076.22	9.3e-17	1	1
ENSOCUP00000026918	RRM_3	PF08777.11	2.7e-31	1	1
ENSOCUP00000008958	RRM_3	PF08777.11	8.9e-30	1	1
ENSOCUP00000026918	La	PF05383.17	4.3e-22	1	1
ENSOCUP00000008958	La	PF05383.17	4.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000010398	SSB-202	2392	-	ENSOCUP00000008958	416 (aa)	-	G1SZ76
ENSOCUT00000033870	SSB-201	1387	XM_002712273	ENSOCUP00000026918	405 (aa)	XP_002712319	U3KNV8

Gene Model

Click here to download ENSOCUG00000010396's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000010396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000010396	SSB	100	94.853	ENSG00000138385	SSB	100	100.000	Homo_sapiens
ENSOCUG00000010396	SSB	99	54.433	ENSAPOG00000003448	ssb	100	54.680	Acanthochromis_polyacanthus
ENSOCUG00000010396	SSB	100	91.190	ENSAMEG00000010507	SSB	100	91.190	Ailuropoda_melanoleuca
ENSOCUG00000010396	SSB	92	58.289	ENSACIG00000001738	ssb	97	58.133	Amphilophus_citrinellus
ENSOCUG00000010396	SSB	99	54.680	ENSAOCG00000020398	ssb	100	54.926	Amphiprion_ocellaris
ENSOCUG00000010396	SSB	99	55.172	ENSAPEG00000020395	ssb	100	55.419	Amphiprion_percula
ENSOCUG00000010396	SSB	99	58.621	ENSATEG00000016884	ssb	100	58.867	Anabas_testudineus
ENSOCUG00000010396	SSB	100	70.824	ENSAPLG00000006109	SSB	100	71.831	Anas_platyrhynchos
ENSOCUG00000010396	SSB	100	68.049	ENSACAG00000017008	SSB	99	67.153	Anolis_carolinensis
ENSOCUG00000010396	SSB	100	85.679	ENSANAG00000027195	-	100	85.679	Aotus_nancymaae
ENSOCUG00000010396	SSB	99	55.198	ENSACLG00000010798	ssb	100	54.950	Astatotilapia_calliptera
ENSOCUG00000010396	SSB	98	54.657	ENSAMXG00000012606	ssb	100	55.690	Astyanax_mexicanus
ENSOCUG00000010396	SSB	100	94.074	ENSBTAG00000008716	SSB	100	94.074	Bos_taurus
ENSOCUG00000010396	SSB	73	35.099	WBGene00016653	C44E4.4	76	35.099	Caenorhabditis_elegans
ENSOCUG00000010396	SSB	100	94.815	ENSCJAG00000045073	SSB	100	94.815	Callithrix_jacchus
ENSOCUG00000010396	SSB	100	93.842	ENSCAFG00000012418	SSB	100	93.842	Canis_familiaris
ENSOCUG00000010396	SSB	100	93.842	ENSCAFG00020002900	SSB	100	93.842	Canis_lupus_dingo
ENSOCUG00000010396	SSB	100	94.074	ENSCHIG00000022624	-	100	94.074	Capra_hircus
ENSOCUG00000010396	SSB	100	88.148	ENSCHIG00000022196	-	100	88.148	Capra_hircus
ENSOCUG00000010396	SSB	100	94.815	ENSTSYG00000000097	SSB	100	94.815	Carlito_syrichta
ENSOCUG00000010396	SSB	100	96.296	ENSCPOG00000003338	SSB	100	96.296	Cavia_porcellus
ENSOCUG00000010396	SSB	100	95.309	ENSCCAG00000035147	SSB	100	95.309	Cebus_capucinus
ENSOCUG00000010396	SSB	100	70.123	ENSCATG00000042909	-	100	70.123	Cercocebus_atys
ENSOCUG00000010396	SSB	100	74.321	ENSCATG00000036701	SSB	100	74.074	Cercocebus_atys
ENSOCUG00000010396	SSB	100	95.556	ENSCLAG00000015617	-	100	95.556	Chinchilla_lanigera
ENSOCUG00000010396	SSB	98	86.398	ENSCSAG00000018390	-	100	86.398	Chlorocebus_sabaeus
ENSOCUG00000010396	SSB	100	95.556	ENSCSAG00000015200	SSB	89	95.556	Chlorocebus_sabaeus
ENSOCUG00000010396	SSB	100	95.062	ENSCHOG00000007763	SSB	100	95.062	Choloepus_hoffmanni
ENSOCUG00000010396	SSB	100	78.484	ENSCPBG00000006519	SSB	100	79.218	Chrysemys_picta_bellii
ENSOCUG00000010396	SSB	100	80.494	ENSCANG00000033240	-	100	80.494	Colobus_angolensis_palliatus
ENSOCUG00000010396	SSB	100	95.062	ENSCANG00000027695	SSB	100	95.062	Colobus_angolensis_palliatus
ENSOCUG00000010396	SSB	98	73.935	ENSCANG00000028838	-	95	73.935	Colobus_angolensis_palliatus
ENSOCUG00000010396	SSB	100	79.075	ENSCGRG00001024831	Ssb	100	80.000	Cricetulus_griseus_chok1gshd
ENSOCUG00000010396	SSB	100	79.075	ENSCGRG00000005387	Ssb	100	80.000	Cricetulus_griseus_crigri
ENSOCUG00000010396	SSB	98	56.642	ENSCSEG00000011599	ssb	99	57.143	Cynoglossus_semilaevis
ENSOCUG00000010396	SSB	99	57.248	ENSCVAG00000021558	ssb	100	57.248	Cyprinodon_variegatus
ENSOCUG00000010396	SSB	98	56.079	ENSDARG00000029252	ssb	99	56.079	Danio_rerio
ENSOCUG00000010396	SSB	100	94.568	ENSDNOG00000013450	SSB	100	94.568	Dasypus_novemcinctus
ENSOCUG00000010396	SSB	100	84.672	ENSDORG00000005543	Ssb	100	84.672	Dipodomys_ordii
ENSOCUG00000010396	SSB	83	33.611	FBgn0011638	La	89	34.332	Drosophila_melanogaster
ENSOCUG00000010396	SSB	58	95.025	ENSETEG00000004614	-	61	95.025	Echinops_telfairi
ENSOCUG00000010396	SSB	96	47.315	ENSEBUG00000001237	ssb	96	47.583	Eptatretus_burgeri
ENSOCUG00000010396	SSB	100	95.556	ENSEASG00005022835	SSB	100	95.556	Equus_asinus_asinus
ENSOCUG00000010396	SSB	100	95.802	ENSECAG00000018495	SSB	100	95.802	Equus_caballus
ENSOCUG00000010396	SSB	82	89.286	ENSEEUG00000008077	SSB	86	89.286	Erinaceus_europaeus
ENSOCUG00000010396	SSB	99	59.113	ENSELUG00000020929	ssb	100	59.360	Esox_lucius
ENSOCUG00000010396	SSB	100	94.581	ENSFCAG00000011601	SSB	100	94.581	Felis_catus
ENSOCUG00000010396	SSB	100	72.727	ENSFALG00000000930	SSB	100	74.693	Ficedula_albicollis
ENSOCUG00000010396	SSB	100	95.802	ENSFDAG00000000598	SSB	100	95.802	Fukomys_damarensis
ENSOCUG00000010396	SSB	72	53.846	ENSFHEG00000003268	ssb	95	53.922	Fundulus_heteroclitus
ENSOCUG00000010396	SSB	97	54.591	ENSGMOG00000002664	ssb	99	54.926	Gadus_morhua
ENSOCUG00000010396	SSB	100	74.878	ENSGALG00000009677	SSB	100	74.146	Gallus_gallus
ENSOCUG00000010396	SSB	99	54.926	ENSGAFG00000002749	ssb	100	55.172	Gambusia_affinis
ENSOCUG00000010396	SSB	99	53.883	ENSGACG00000005107	ssb	100	54.854	Gasterosteus_aculeatus
ENSOCUG00000010396	SSB	100	78.484	ENSGAGG00000007807	SSB	100	78.729	Gopherus_agassizii
ENSOCUG00000010396	SSB	63	90.667	ENSGGOG00000023471	-	100	90.667	Gorilla_gorilla
ENSOCUG00000010396	SSB	100	78.519	ENSGGOG00000024891	-	100	78.519	Gorilla_gorilla
ENSOCUG00000010396	SSB	99	54.703	ENSHBUG00000006584	ssb	100	54.455	Haplochromis_burtoni
ENSOCUG00000010396	SSB	100	94.175	ENSHGLG00000017580	-	100	94.175	Heterocephalus_glaber_female
ENSOCUG00000010396	SSB	100	87.224	ENSHGLG00000004478	-	100	87.224	Heterocephalus_glaber_female
ENSOCUG00000010396	SSB	100	86.173	ENSHGLG00000005832	-	100	86.173	Heterocephalus_glaber_female
ENSOCUG00000010396	SSB	100	81.728	ENSHGLG00100008767	-	100	81.728	Heterocephalus_glaber_male
ENSOCUG00000010396	SSB	100	94.175	ENSHGLG00100003084	-	100	94.175	Heterocephalus_glaber_male
ENSOCUG00000010396	SSB	98	54.912	ENSHCOG00000019011	ssb	99	55.164	Hippocampus_comes
ENSOCUG00000010396	SSB	97	57.463	ENSIPUG00000003681	SSB	99	57.463	Ictalurus_punctatus
ENSOCUG00000010396	SSB	100	96.543	ENSSTOG00000008416	SSB	100	96.543	Ictidomys_tridecemlineatus
ENSOCUG00000010396	SSB	100	80.615	ENSJJAG00000023158	-	100	80.615	Jaculus_jaculus
ENSOCUG00000010396	SSB	99	68.408	ENSJJAG00000016250	-	99	68.408	Jaculus_jaculus
ENSOCUG00000010396	SSB	99	56.404	ENSKMAG00000017317	ssb	100	56.650	Kryptolebias_marmoratus
ENSOCUG00000010396	SSB	99	53.695	ENSLBEG00000017345	ssb	100	54.187	Labrus_bergylta
ENSOCUG00000010396	SSB	99	66.746	ENSLACG00000014056	SSB	99	67.647	Latimeria_chalumnae
ENSOCUG00000010396	SSB	98	67.082	ENSLOCG00000007933	ssb	99	67.332	Lepisosteus_oculatus
ENSOCUG00000010396	SSB	100	89.573	ENSLAFG00000000867	-	100	90.758	Loxodonta_africana
ENSOCUG00000010396	SSB	100	79.506	ENSLAFG00000028909	-	100	79.506	Loxodonta_africana
ENSOCUG00000010396	SSB	75	71.192	ENSLAFG00000026721	-	99	71.192	Loxodonta_africana
ENSOCUG00000010396	SSB	100	95.309	ENSMFAG00000039066	SSB	100	95.309	Macaca_fascicularis
ENSOCUG00000010396	SSB	88	81.232	ENSMFAG00000041478	-	100	81.232	Macaca_fascicularis
ENSOCUG00000010396	SSB	100	95.309	ENSMMUG00000023051	SSB	100	95.309	Macaca_mulatta
ENSOCUG00000010396	SSB	100	80.494	ENSMMUG00000011724	-	97	79.012	Macaca_mulatta
ENSOCUG00000010396	SSB	99	66.005	ENSMMUG00000039889	-	100	66.253	Macaca_mulatta
ENSOCUG00000010396	SSB	88	81.232	ENSMNEG00000034698	-	100	81.232	Macaca_nemestrina
ENSOCUG00000010396	SSB	100	82.683	ENSMNEG00000028321	SSB	85	99.130	Macaca_nemestrina
ENSOCUG00000010396	SSB	100	95.309	ENSMLEG00000035717	SSB	100	95.309	Mandrillus_leucophaeus
ENSOCUG00000010396	SSB	100	67.654	ENSMLEG00000042644	-	100	67.654	Mandrillus_leucophaeus
ENSOCUG00000010396	SSB	99	58.621	ENSMAMG00000004800	ssb	100	58.867	Mastacembelus_armatus
ENSOCUG00000010396	SSB	99	55.198	ENSMZEG00005005749	ssb	100	54.950	Maylandia_zebra
ENSOCUG00000010396	SSB	100	74.510	ENSMGAG00000010328	SSB	99	76.585	Meleagris_gallopavo
ENSOCUG00000010396	SSB	98	87.406	ENSMICG00000033304	-	98	86.856	Microcebus_murinus
ENSOCUG00000010396	SSB	99	95.533	ENSMICG00000028252	-	99	95.533	Microcebus_murinus
ENSOCUG00000010396	SSB	86	82.390	ENSMODG00000007027	-	99	82.390	Monodelphis_domestica
ENSOCUG00000010396	SSB	100	67.407	ENSMODG00000019271	-	100	53.041	Monodelphis_domestica
ENSOCUG00000010396	SSB	100	79.808	ENSMODG00000008227	-	100	79.808	Monodelphis_domestica
ENSOCUG00000010396	SSB	90	55.285	ENSMALG00000008045	ssb	90	58.621	Monopterus_albus
ENSOCUG00000010396	SSB	100	77.435	MGP_CAROLIEiJ_G0023629	-	100	91.848	Mus_caroli
ENSOCUG00000010396	SSB	100	76.722	ENSMUSG00000068882	Ssb	100	91.848	Mus_musculus
ENSOCUG00000010396	SSB	100	76.960	MGP_PahariEiJ_G0025081	-	100	91.848	Mus_pahari
ENSOCUG00000010396	SSB	100	76.722	MGP_SPRETEiJ_G0024551	Ssb	100	91.848	Mus_spretus
ENSOCUG00000010396	SSB	100	94.568	ENSMPUG00000000785	SSB	100	94.568	Mustela_putorius_furo
ENSOCUG00000010396	SSB	100	90.000	ENSMLUG00000016316	SSB	100	90.000	Myotis_lucifugus
ENSOCUG00000010396	SSB	99	55.198	ENSNBRG00000012661	ssb	100	54.950	Neolamprologus_brichardi
ENSOCUG00000010396	SSB	100	95.556	ENSNLEG00000004958	SSB	100	95.556	Nomascus_leucogenys
ENSOCUG00000010396	SSB	100	68.473	ENSNLEG00000028754	-	100	68.966	Nomascus_leucogenys
ENSOCUG00000010396	SSB	61	88.710	ENSMEUG00000001650	-	100	88.710	Notamacropus_eugenii
ENSOCUG00000010396	SSB	72	77.586	ENSOPRG00000008475	-	100	77.586	Ochotona_princeps
ENSOCUG00000010396	SSB	93	89.947	ENSODEG00000004202	-	100	89.418	Octodon_degus
ENSOCUG00000010396	SSB	99	54.950	ENSONIG00000008776	ssb	100	54.703	Oreochromis_niloticus
ENSOCUG00000010396	SSB	100	84.198	ENSOANG00000008543	SSB	100	84.198	Ornithorhynchus_anatinus
ENSOCUG00000010396	SSB	99	57.635	ENSORLG00000017208	ssb	100	57.882	Oryzias_latipes
ENSOCUG00000010396	SSB	99	57.882	ENSORLG00020022574	ssb	100	58.128	Oryzias_latipes_hni
ENSOCUG00000010396	SSB	99	57.389	ENSORLG00015016592	ssb	100	57.635	Oryzias_latipes_hsok
ENSOCUG00000010396	SSB	99	57.778	ENSOMEG00000003193	ssb	100	58.272	Oryzias_melastigma
ENSOCUG00000010396	SSB	100	89.100	ENSOGAG00000029768	SSB	100	89.100	Otolemur_garnettii
ENSOCUG00000010396	SSB	100	93.580	ENSOARG00000002906	SSB	100	93.580	Ovis_aries
ENSOCUG00000010396	SSB	100	77.531	ENSPPAG00000032427	-	100	86.822	Pan_paniscus
ENSOCUG00000010396	SSB	100	94.853	ENSPPAG00000042673	SSB	100	94.853	Pan_paniscus
ENSOCUG00000010396	SSB	97	74.112	ENSPPAG00000006189	-	96	77.957	Pan_paniscus
ENSOCUG00000010396	SSB	100	94.581	ENSPPRG00000006599	SSB	100	94.581	Panthera_pardus
ENSOCUG00000010396	SSB	100	94.335	ENSPTIG00000011021	SSB	97	94.335	Panthera_tigris_altaica
ENSOCUG00000010396	SSB	100	73.827	ENSPTRG00000042880	-	100	73.827	Pan_troglodytes
ENSOCUG00000010396	SSB	100	94.853	ENSPTRG00000012620	SSB	100	94.853	Pan_troglodytes
ENSOCUG00000010396	SSB	98	65.163	ENSPANG00000031877	-	95	65.664	Papio_anubis
ENSOCUG00000010396	SSB	100	68.395	ENSPANG00000034126	-	100	68.889	Papio_anubis
ENSOCUG00000010396	SSB	100	95.309	ENSPANG00000007440	SSB	100	95.309	Papio_anubis
ENSOCUG00000010396	SSB	99	61.975	ENSPKIG00000019325	ssb	99	62.469	Paramormyrops_kingsleyae
ENSOCUG00000010396	SSB	100	76.039	ENSPSIG00000002265	SSB	93	76.284	Pelodiscus_sinensis
ENSOCUG00000010396	SSB	84	54.179	ENSPMGG00000020075	ssb	91	54.467	Periophthalmus_magnuspinnatus
ENSOCUG00000010396	SSB	90	47.439	ENSPMAG00000002982	ssb	100	45.814	Petromyzon_marinus
ENSOCUG00000010396	SSB	100	81.281	ENSPCIG00000028591	-	100	83.744	Phascolarctos_cinereus
ENSOCUG00000010396	SSB	99	56.158	ENSPFOG00000009650	ssb	100	56.404	Poecilia_formosa
ENSOCUG00000010396	SSB	99	55.911	ENSPLAG00000020498	ssb	100	56.158	Poecilia_latipinna
ENSOCUG00000010396	SSB	99	55.665	ENSPMEG00000001051	ssb	100	55.911	Poecilia_mexicana
ENSOCUG00000010396	SSB	94	55.990	ENSPREG00000003708	ssb	99	56.250	Poecilia_reticulata
ENSOCUG00000010396	SSB	100	95.556	ENSPPYG00000012919	SSB	100	95.556	Pongo_abelii
ENSOCUG00000010396	SSB	95	89.556	ENSPCAG00000010276	SSB	100	89.556	Procavia_capensis
ENSOCUG00000010396	SSB	100	83.704	ENSPCOG00000023189	-	100	83.704	Propithecus_coquereli
ENSOCUG00000010396	SSB	100	91.605	ENSPCOG00000015741	-	100	91.605	Propithecus_coquereli
ENSOCUG00000010396	SSB	87	94.350	ENSPVAG00000006615	SSB	100	93.785	Pteropus_vampyrus
ENSOCUG00000010396	SSB	99	55.198	ENSPNYG00000006444	ssb	100	54.950	Pundamilia_nyererei
ENSOCUG00000010396	SSB	98	56.158	ENSPNAG00000011708	ssb	100	56.829	Pygocentrus_nattereri
ENSOCUG00000010396	SSB	100	78.622	ENSRNOG00000007998	Ssb	100	78.622	Rattus_norvegicus
ENSOCUG00000010396	SSB	100	78.186	ENSRNOG00000011606	AABR07061825.1	100	78.186	Rattus_norvegicus
ENSOCUG00000010396	SSB	100	68.473	ENSRBIG00000029918	-	100	68.473	Rhinopithecus_bieti
ENSOCUG00000010396	SSB	94	79.420	ENSRBIG00000041232	-	98	79.420	Rhinopithecus_bieti
ENSOCUG00000010396	SSB	100	78.780	ENSRBIG00000041972	SSB	88	99.130	Rhinopithecus_bieti
ENSOCUG00000010396	SSB	89	87.293	ENSRBIG00000041608	-	98	87.293	Rhinopithecus_bieti
ENSOCUG00000010396	SSB	100	78.325	ENSRROG00000007149	-	100	78.325	Rhinopithecus_roxellana
ENSOCUG00000010396	SSB	100	95.062	ENSRROG00000040346	SSB	100	95.062	Rhinopithecus_roxellana
ENSOCUG00000010396	SSB	98	80.556	ENSRROG00000031684	-	100	80.556	Rhinopithecus_roxellana
ENSOCUG00000010396	SSB	98	85.750	ENSRROG00000034102	-	98	85.678	Rhinopithecus_roxellana
ENSOCUG00000010396	SSB	100	95.556	ENSSBOG00000027204	SSB	100	95.556	Saimiri_boliviensis_boliviensis
ENSOCUG00000010396	SSB	100	83.498	ENSSHAG00000018062	SSB	100	83.498	Sarcophilus_harrisii
ENSOCUG00000010396	SSB	99	64.548	ENSSFOG00015000550	ssb	100	64.792	Scleropages_formosus
ENSOCUG00000010396	SSB	98	53.383	ENSSMAG00000013885	ssb	99	56.684	Scophthalmus_maximus
ENSOCUG00000010396	SSB	99	56.650	ENSSDUG00000020117	ssb	100	56.897	Seriola_dumerili
ENSOCUG00000010396	SSB	99	54.591	ENSSLDG00000002525	ssb	100	54.591	Seriola_lalandi_dorsalis
ENSOCUG00000010396	SSB	95	85.117	ENSSARG00000007747	SSB	100	84.334	Sorex_araneus
ENSOCUG00000010396	SSB	100	76.167	ENSSPUG00000012112	SSB	100	76.167	Sphenodon_punctatus
ENSOCUG00000010396	SSB	99	54.926	ENSSPAG00000005696	ssb	100	55.172	Stegastes_partitus
ENSOCUG00000010396	SSB	98	77.330	ENSSSCG00000015938	SSB	98	77.330	Sus_scrofa
ENSOCUG00000010396	SSB	100	74.572	ENSTGUG00000007942	SSB	100	74.083	Taeniopygia_guttata
ENSOCUG00000010396	SSB	99	56.436	ENSTRUG00000017839	ssb	100	57.037	Takifugu_rubripes
ENSOCUG00000010396	SSB	90	59.239	ENSTNIG00000000915	ssb	100	59.239	Tetraodon_nigroviridis
ENSOCUG00000010396	SSB	83	99.130	ENSTBEG00000009056	SSB	82	99.130	Tupaia_belangeri
ENSOCUG00000010396	SSB	100	93.842	ENSTTRG00000002152	SSB	100	93.842	Tursiops_truncatus
ENSOCUG00000010396	SSB	93	94.960	ENSUAMG00000027833	SSB	99	94.960	Ursus_americanus
ENSOCUG00000010396	SSB	100	94.335	ENSUMAG00000013907	SSB	100	94.335	Ursus_maritimus
ENSOCUG00000010396	SSB	100	94.074	ENSVPAG00000007183	SSB	100	94.074	Vicugna_pacos
ENSOCUG00000010396	SSB	100	93.842	ENSVVUG00000016573	SSB	78	93.842	Vulpes_vulpes
ENSOCUG00000010396	SSB	100	58.645	ENSXETG00000025402	ssb	100	60.373	Xenopus_tropicalis
ENSOCUG00000010396	SSB	94	54.047	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSOCUG00000010396	SSB	99	55.419	ENSXMAG00000004888	ssb	100	55.665	Xiphophorus_maculatus