EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000010440 (Gene tree)
Gene ID: 100342991
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 396928 bases
Position: chr19:30465444-30862371
Accession: 100342991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000008989	RRM_1	PF00076.22	2.4e-34	1	2
ENSOCUP00000008989	RRM_1	PF00076.22	2.4e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000010437	MSI2-201	5571	XM_002719098	ENSOCUP00000008989	324 (aa)	XP_002719144	G1SZA1

Gene Model

Click here to download ENSOCUG00000010440's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000010440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000010440	MSI2	54	42.442	ENSOCUG00000023322	-	94	37.634
ENSOCUG00000010440	MSI2	54	43.023	ENSOCUG00000013350	-	61	41.758
ENSOCUG00000010440	MSI2	54	41.279	ENSOCUG00000026859	HNRNPA2B1	54	41.279
ENSOCUG00000010440	MSI2	54	42.442	ENSOCUG00000022668	-	53	42.442
ENSOCUG00000010440	MSI2	97	71.383	ENSOCUG00000027716	MSI1	100	69.775
ENSOCUG00000010440	MSI2	53	50.292	ENSOCUG00000013805	-	59	41.600
ENSOCUG00000010440	MSI2	52	41.135	ENSOCUG00000010985	-	69	36.709
ENSOCUG00000010440	MSI2	54	44.186	ENSOCUG00000002743	-	60	43.169
ENSOCUG00000010440	MSI2	53	49.405	ENSOCUG00000001357	HNRNPD	82	41.453
ENSOCUG00000010440	MSI2	54	40.698	ENSOCUG00000022627	-	72	36.697
ENSOCUG00000010440	MSI2	61	33.990	ENSOCUG00000014210	-	88	33.990
ENSOCUG00000010440	MSI2	53	43.103	ENSOCUG00000005703	-	73	43.103
ENSOCUG00000010440	MSI2	54	44.186	ENSOCUG00000029392	-	90	36.691
ENSOCUG00000010440	MSI2	55	41.530	ENSOCUG00000022568	-	78	41.209
ENSOCUG00000010440	MSI2	52	41.844	ENSOCUG00000023444	-	69	36.898
ENSOCUG00000010440	MSI2	57	40.314	ENSOCUG00000028124	-	65	38.075
ENSOCUG00000010440	MSI2	52	32.886	ENSOCUG00000004049	-	70	32.886
ENSOCUG00000010440	MSI2	58	39.267	ENSOCUG00000021006	-	81	39.267
ENSOCUG00000010440	MSI2	55	41.530	ENSOCUG00000021007	-	83	41.209
ENSOCUG00000010440	MSI2	54	39.429	ENSOCUG00000006431	-	75	39.674
ENSOCUG00000010440	MSI2	59	44.156	ENSOCUG00000002271	RBM3	83	44.156
ENSOCUG00000010440	MSI2	56	38.547	ENSOCUG00000025252	-	81	38.547
ENSOCUG00000010440	MSI2	56	33.721	ENSOCUG00000027309	-	85	33.721
ENSOCUG00000010440	MSI2	54	43.023	ENSOCUG00000023674	-	79	43.023
ENSOCUG00000010440	MSI2	53	50.292	ENSOCUG00000026424	HNRNPAB	68	48.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000010440	MSI2	99	99.556	ENSG00000153944	MSI2	96	98.750	Homo_sapiens
ENSOCUG00000010440	MSI2	94	94.348	ENSAPOG00000001658	msi2a	98	89.286	Acanthochromis_polyacanthus
ENSOCUG00000010440	MSI2	97	94.479	ENSAMEG00000002697	MSI2	100	94.479	Ailuropoda_melanoleuca
ENSOCUG00000010440	MSI2	95	67.473	ENSACIG00000009475	msi2a	99	67.473	Amphilophus_citrinellus
ENSOCUG00000010440	MSI2	51	80.000	ENSAOCG00000014822	msi2a	64	80.000	Amphiprion_ocellaris
ENSOCUG00000010440	MSI2	94	90.429	ENSAPEG00000007706	msi2a	98	89.286	Amphiprion_percula
ENSOCUG00000010440	MSI2	94	94.348	ENSATEG00000010498	msi2a	98	89.286	Anabas_testudineus
ENSOCUG00000010440	MSI2	97	93.165	ENSATEG00000003301	-	100	93.165	Anabas_testudineus
ENSOCUG00000010440	MSI2	93	97.826	ENSACAG00000005452	MSI2	74	95.455	Anolis_carolinensis
ENSOCUG00000010440	MSI2	97	100.000	ENSANAG00000037827	MSI2	96	98.750	Aotus_nancymaae
ENSOCUG00000010440	MSI2	94	93.913	ENSACLG00000007752	msi2a	98	88.961	Astatotilapia_calliptera
ENSOCUG00000010440	MSI2	97	95.130	ENSAMXG00000032796	msi2a	94	93.182	Astyanax_mexicanus
ENSOCUG00000010440	MSI2	100	94.753	ENSAMXG00000010474	msi2b	100	94.753	Astyanax_mexicanus
ENSOCUG00000010440	MSI2	100	99.383	ENSBTAG00000004406	MSI2	100	99.383	Bos_taurus
ENSOCUG00000010440	MSI2	68	63.158	WBGene00003423	msi-1	71	63.158	Caenorhabditis_elegans
ENSOCUG00000010440	MSI2	97	100.000	ENSCJAG00000013998	MSI2	96	98.750	Callithrix_jacchus
ENSOCUG00000010440	MSI2	97	93.103	ENSCAFG00020025620	MSI2	81	93.103	Canis_lupus_dingo
ENSOCUG00000010440	MSI2	97	99.674	ENSCHIG00000016580	MSI2	94	99.674	Capra_hircus
ENSOCUG00000010440	MSI2	97	95.390	ENSCPOG00000034042	MSI2	99	95.390	Cavia_porcellus
ENSOCUG00000010440	MSI2	97	100.000	ENSCCAG00000033927	MSI2	96	98.750	Cebus_capucinus
ENSOCUG00000010440	MSI2	99	99.556	ENSCATG00000040879	MSI2	96	98.750	Cercocebus_atys
ENSOCUG00000010440	MSI2	97	94.462	ENSCLAG00000014325	MSI2	94	94.462	Chinchilla_lanigera
ENSOCUG00000010440	MSI2	97	100.000	ENSCSAG00000005633	MSI2	94	100.000	Chlorocebus_sabaeus
ENSOCUG00000010440	MSI2	93	70.000	ENSCHOG00000008660	MSI2	100	70.000	Choloepus_hoffmanni
ENSOCUG00000010440	MSI2	97	99.015	ENSCPBG00000009942	MSI2	95	91.760	Chrysemys_picta_bellii
ENSOCUG00000010440	MSI2	90	54.634	ENSCING00000018579	-	97	53.125	Ciona_intestinalis
ENSOCUG00000010440	MSI2	68	66.216	ENSCSAVG00000010397	-	71	65.066	Ciona_savignyi
ENSOCUG00000010440	MSI2	99	99.556	ENSCANG00000036414	MSI2	96	98.750	Colobus_angolensis_palliatus
ENSOCUG00000010440	MSI2	97	99.675	ENSCGRG00001013330	Msi2	94	99.675	Cricetulus_griseus_chok1gshd
ENSOCUG00000010440	MSI2	97	94.277	ENSCGRG00000003141	Msi2	100	94.277	Cricetulus_griseus_crigri
ENSOCUG00000010440	MSI2	97	83.502	ENSCSEG00000003266	-	92	83.502	Cynoglossus_semilaevis
ENSOCUG00000010440	MSI2	52	73.006	ENSCSEG00000013549	msi2a	88	73.006	Cynoglossus_semilaevis
ENSOCUG00000010440	MSI2	79	75.258	ENSCSEG00000013557	msi2a	83	73.711	Cynoglossus_semilaevis
ENSOCUG00000010440	MSI2	97	86.645	ENSCVAG00000017075	msi2a	97	88.776	Cyprinodon_variegatus
ENSOCUG00000010440	MSI2	97	76.839	ENSDARG00000033901	msi2a	95	77.112	Danio_rerio
ENSOCUG00000010440	MSI2	89	95.053	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSOCUG00000010440	MSI2	97	100.000	ENSDNOG00000014501	MSI2	100	100.000	Dasypus_novemcinctus
ENSOCUG00000010440	MSI2	79	88.832	ENSDORG00000005394	Msi2	84	87.817	Dipodomys_ordii
ENSOCUG00000010440	MSI2	52	100.000	ENSDORG00000028440	-	100	100.000	Dipodomys_ordii
ENSOCUG00000010440	MSI2	97	57.637	FBgn0260943	Rbp6	88	68.750	Drosophila_melanogaster
ENSOCUG00000010440	MSI2	70	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSOCUG00000010440	MSI2	89	66.238	ENSEBUG00000006732	msi2a	87	65.273	Eptatretus_burgeri
ENSOCUG00000010440	MSI2	100	96.552	ENSEASG00005002965	MSI2	100	95.793	Equus_asinus_asinus
ENSOCUG00000010440	MSI2	97	98.696	ENSECAG00000011435	MSI2	94	91.892	Equus_caballus
ENSOCUG00000010440	MSI2	83	85.375	ENSEEUG00000007810	MSI2	100	85.375	Erinaceus_europaeus
ENSOCUG00000010440	MSI2	97	88.179	ENSELUG00000001361	msi2b	93	88.179	Esox_lucius
ENSOCUG00000010440	MSI2	97	94.521	ENSELUG00000011747	msi2a	93	94.521	Esox_lucius
ENSOCUG00000010440	MSI2	97	100.000	ENSFCAG00000041686	MSI2	96	98.750	Felis_catus
ENSOCUG00000010440	MSI2	97	94.462	ENSFDAG00000016118	MSI2	100	94.462	Fukomys_damarensis
ENSOCUG00000010440	MSI2	94	94.348	ENSFHEG00000000084	msi2a	98	88.961	Fundulus_heteroclitus
ENSOCUG00000010440	MSI2	50	96.386	ENSGMOG00000007596	-	80	96.386	Gadus_morhua
ENSOCUG00000010440	MSI2	97	92.923	ENSGALG00000005567	MSI2	94	92.923	Gallus_gallus
ENSOCUG00000010440	MSI2	89	81.973	ENSGAFG00000006974	msi2a	97	80.936	Gambusia_affinis
ENSOCUG00000010440	MSI2	97	95.021	ENSGAGG00000016542	MSI2	100	90.132	Gopherus_agassizii
ENSOCUG00000010440	MSI2	99	99.556	ENSGGOG00000013182	MSI2	96	98.750	Gorilla_gorilla
ENSOCUG00000010440	MSI2	94	93.913	ENSHBUG00000020800	msi2a	98	88.961	Haplochromis_burtoni
ENSOCUG00000010440	MSI2	95	84.923	ENSHGLG00000012444	MSI2	93	84.923	Heterocephalus_glaber_female
ENSOCUG00000010440	MSI2	76	91.304	ENSHGLG00100003744	MSI2	100	91.304	Heterocephalus_glaber_male
ENSOCUG00000010440	MSI2	52	100.000	ENSHGLG00100004028	-	87	100.000	Heterocephalus_glaber_male
ENSOCUG00000010440	MSI2	94	93.913	ENSHCOG00000000266	msi2a	91	85.174	Hippocampus_comes
ENSOCUG00000010440	MSI2	91	86.580	ENSHCOG00000017241	-	64	87.678	Hippocampus_comes
ENSOCUG00000010440	MSI2	97	94.178	ENSIPUG00000021097	msi2a	93	92.808	Ictalurus_punctatus
ENSOCUG00000010440	MSI2	99	91.781	ENSIPUG00000003732	msi2b	93	91.781	Ictalurus_punctatus
ENSOCUG00000010440	MSI2	97	95.390	ENSSTOG00000007884	MSI2	99	95.390	Ictidomys_tridecemlineatus
ENSOCUG00000010440	MSI2	52	100.000	ENSJJAG00000009467	-	100	100.000	Jaculus_jaculus
ENSOCUG00000010440	MSI2	76	85.930	ENSJJAG00000006292	-	100	85.427	Jaculus_jaculus
ENSOCUG00000010440	MSI2	93	92.177	ENSKMAG00000009494	msi2a	89	92.491	Kryptolebias_marmoratus
ENSOCUG00000010440	MSI2	94	94.348	ENSLBEG00000007061	msi2a	98	89.286	Labrus_bergylta
ENSOCUG00000010440	MSI2	97	65.982	ENSLBEG00000026223	-	100	65.982	Labrus_bergylta
ENSOCUG00000010440	MSI2	57	96.040	ENSLACG00000016798	MSI2	100	96.040	Latimeria_chalumnae
ENSOCUG00000010440	MSI2	97	79.508	ENSLOCG00000004675	msi2b	95	79.508	Lepisosteus_oculatus
ENSOCUG00000010440	MSI2	99	99.556	ENSMFAG00000003775	MSI2	96	98.750	Macaca_fascicularis
ENSOCUG00000010440	MSI2	97	99.556	ENSMMUG00000002069	MSI2	96	98.750	Macaca_mulatta
ENSOCUG00000010440	MSI2	99	99.556	ENSMNEG00000045275	MSI2	96	98.750	Macaca_nemestrina
ENSOCUG00000010440	MSI2	99	99.556	ENSMLEG00000033888	MSI2	96	98.750	Mandrillus_leucophaeus
ENSOCUG00000010440	MSI2	94	94.348	ENSMAMG00000010503	msi2a	98	87.055	Mastacembelus_armatus
ENSOCUG00000010440	MSI2	94	94.783	ENSMAMG00000002488	-	85	96.154	Mastacembelus_armatus
ENSOCUG00000010440	MSI2	97	93.160	ENSMZEG00005007676	msi2a	94	93.160	Maylandia_zebra
ENSOCUG00000010440	MSI2	97	94.172	ENSMAUG00000003862	Msi2	94	94.172	Mesocricetus_auratus
ENSOCUG00000010440	MSI2	95	77.564	ENSMICG00000032913	-	93	78.526	Microcebus_murinus
ENSOCUG00000010440	MSI2	97	100.000	ENSMICG00000013598	-	96	98.750	Microcebus_murinus
ENSOCUG00000010440	MSI2	97	94.462	ENSMOCG00000005820	Msi2	94	94.462	Microtus_ochrogaster
ENSOCUG00000010440	MSI2	96	84.244	ENSMMOG00000008348	msi2a	95	84.516	Mola_mola
ENSOCUG00000010440	MSI2	76	89.855	ENSMODG00000014790	MSI2	100	89.855	Monodelphis_domestica
ENSOCUG00000010440	MSI2	97	86.971	ENSMALG00000000071	msi2a	93	95.455	Monopterus_albus
ENSOCUG00000010440	MSI2	97	100.000	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSOCUG00000010440	MSI2	97	100.000	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSOCUG00000010440	MSI2	97	100.000	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSOCUG00000010440	MSI2	97	100.000	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSOCUG00000010440	MSI2	100	99.691	ENSMPUG00000015377	MSI2	100	99.691	Mustela_putorius_furo
ENSOCUG00000010440	MSI2	100	99.074	ENSMLUG00000007865	MSI2	100	99.074	Myotis_lucifugus
ENSOCUG00000010440	MSI2	97	94.462	ENSNGAG00000017807	Msi2	94	94.462	Nannospalax_galili
ENSOCUG00000010440	MSI2	94	90.099	ENSNBRG00000014596	msi2a	98	88.961	Neolamprologus_brichardi
ENSOCUG00000010440	MSI2	97	99.556	ENSNLEG00000008059	MSI2	100	94.212	Nomascus_leucogenys
ENSOCUG00000010440	MSI2	70	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSOCUG00000010440	MSI2	97	94.462	ENSODEG00000011974	MSI2	94	94.462	Octodon_degus
ENSOCUG00000010440	MSI2	52	96.154	ENSONIG00000001972	msi2a	72	96.154	Oreochromis_niloticus
ENSOCUG00000010440	MSI2	93	95.745	ENSOANG00000005667	MSI2	72	95.745	Ornithorhynchus_anatinus
ENSOCUG00000010440	MSI2	97	93.151	ENSORLG00000009671	msi2a	94	93.151	Oryzias_latipes
ENSOCUG00000010440	MSI2	97	93.151	ENSORLG00020021556	msi2a	100	87.464	Oryzias_latipes_hni
ENSOCUG00000010440	MSI2	97	93.151	ENSORLG00015004592	msi2a	94	93.151	Oryzias_latipes_hsok
ENSOCUG00000010440	MSI2	97	91.694	ENSOMEG00000000146	msi2a	98	91.694	Oryzias_melastigma
ENSOCUG00000010440	MSI2	95	95.455	ENSOGAG00000005621	MSI2	100	95.455	Otolemur_garnettii
ENSOCUG00000010440	MSI2	97	94.444	ENSPPAG00000037697	MSI2	96	98.750	Pan_paniscus
ENSOCUG00000010440	MSI2	97	100.000	ENSPPRG00000001848	MSI2	96	98.750	Panthera_pardus
ENSOCUG00000010440	MSI2	73	77.731	ENSPTIG00000021873	-	93	77.731	Panthera_tigris_altaica
ENSOCUG00000010440	MSI2	97	94.212	ENSPTIG00000021678	MSI2	96	94.212	Panthera_tigris_altaica
ENSOCUG00000010440	MSI2	99	99.556	ENSPTRG00000009437	MSI2	96	98.750	Pan_troglodytes
ENSOCUG00000010440	MSI2	99	99.556	ENSPANG00000022319	MSI2	96	98.750	Papio_anubis
ENSOCUG00000010440	MSI2	93	90.816	ENSPKIG00000007038	-	90	86.408	Paramormyrops_kingsleyae
ENSOCUG00000010440	MSI2	97	99.177	ENSPSIG00000008618	MSI2	78	99.177	Pelodiscus_sinensis
ENSOCUG00000010440	MSI2	94	89.769	ENSPMGG00000005888	msi2a	98	88.636	Periophthalmus_magnuspinnatus
ENSOCUG00000010440	MSI2	52	100.000	ENSPEMG00000021793	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSOCUG00000010440	MSI2	97	92.675	ENSPCIG00000006063	MSI2	94	90.691	Phascolarctos_cinereus
ENSOCUG00000010440	MSI2	51	94.048	ENSPFOG00000019337	MSI2	74	94.048	Poecilia_formosa
ENSOCUG00000010440	MSI2	52	91.803	ENSPLAG00000000436	msi2a	64	92.562	Poecilia_latipinna
ENSOCUG00000010440	MSI2	51	83.898	ENSPMEG00000013247	msi2a	73	83.898	Poecilia_mexicana
ENSOCUG00000010440	MSI2	94	94.348	ENSPREG00000000881	msi2a	97	86.688	Poecilia_reticulata
ENSOCUG00000010440	MSI2	97	96.639	ENSPPYG00000008244	-	100	96.639	Pongo_abelii
ENSOCUG00000010440	MSI2	73	70.588	ENSPCAG00000010552	MSI2	100	70.588	Procavia_capensis
ENSOCUG00000010440	MSI2	57	99.320	ENSPCOG00000019195	-	100	99.320	Propithecus_coquereli
ENSOCUG00000010440	MSI2	97	90.785	ENSPVAG00000017053	MSI2	100	90.785	Pteropus_vampyrus
ENSOCUG00000010440	MSI2	97	93.160	ENSPNYG00000018393	msi2a	94	93.160	Pundamilia_nyererei
ENSOCUG00000010440	MSI2	97	95.130	ENSPNAG00000014957	msi2a	94	93.506	Pygocentrus_nattereri
ENSOCUG00000010440	MSI2	97	95.222	ENSPNAG00000000844	msi2b	93	93.515	Pygocentrus_nattereri
ENSOCUG00000010440	MSI2	97	100.000	ENSRNOG00000025338	Msi2	100	100.000	Rattus_norvegicus
ENSOCUG00000010440	MSI2	57	99.237	ENSRROG00000034421	-	100	99.237	Rhinopithecus_roxellana
ENSOCUG00000010440	MSI2	99	100.000	ENSSBOG00000026425	MSI2	96	98.750	Saimiri_boliviensis_boliviensis
ENSOCUG00000010440	MSI2	97	93.210	ENSSHAG00000008672	MSI2	100	93.210	Sarcophilus_harrisii
ENSOCUG00000010440	MSI2	97	89.610	ENSSFOG00015021687	-	97	87.987	Scleropages_formosus
ENSOCUG00000010440	MSI2	92	87.204	ENSSFOG00015012168	msi2b	68	87.204	Scleropages_formosus
ENSOCUG00000010440	MSI2	94	94.348	ENSSMAG00000018484	msi2a	98	89.286	Scophthalmus_maximus
ENSOCUG00000010440	MSI2	97	87.582	ENSSDUG00000021968	-	86	95.385	Seriola_dumerili
ENSOCUG00000010440	MSI2	94	94.348	ENSSDUG00000014507	msi2a	98	89.286	Seriola_dumerili
ENSOCUG00000010440	MSI2	94	94.348	ENSSLDG00000017172	msi2a	98	89.286	Seriola_lalandi_dorsalis
ENSOCUG00000010440	MSI2	54	95.620	ENSSPUG00000000913	-	82	95.620	Sphenodon_punctatus
ENSOCUG00000010440	MSI2	94	94.348	ENSSPAG00000017793	msi2a	89	86.395	Stegastes_partitus
ENSOCUG00000010440	MSI2	97	100.000	ENSSSCG00000038505	MSI2	100	94.444	Sus_scrofa
ENSOCUG00000010440	MSI2	76	90.338	ENSTGUG00000008452	MSI2	100	90.338	Taeniopygia_guttata
ENSOCUG00000010440	MSI2	97	92.517	ENSTRUG00000021248	msi2a	88	92.517	Takifugu_rubripes
ENSOCUG00000010440	MSI2	70	83.636	ENSTBEG00000001241	MSI2	67	83.636	Tupaia_belangeri
ENSOCUG00000010440	MSI2	97	90.756	ENSTTRG00000002189	MSI2	100	90.756	Tursiops_truncatus
ENSOCUG00000010440	MSI2	100	99.691	ENSUAMG00000000700	MSI2	100	99.691	Ursus_americanus
ENSOCUG00000010440	MSI2	93	92.075	ENSUMAG00000000505	MSI2	95	92.075	Ursus_maritimus
ENSOCUG00000010440	MSI2	62	84.615	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSOCUG00000010440	MSI2	100	98.671	ENSVVUG00000011783	MSI2	100	98.671	Vulpes_vulpes
ENSOCUG00000010440	MSI2	93	87.500	ENSXCOG00000006113	msi2a	98	73.156	Xiphophorus_couchianus
ENSOCUG00000010440	MSI2	94	94.348	ENSXMAG00000000608	msi2a	97	88.776	Xiphophorus_maculatus