EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000010468 (Gene tree)
Gene ID: 100342333
Gene Symbol: CSTF2
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 27077 bases
Position: chrX:88525522-88552598
Accession: 100342333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000020817	RRM_1	PF00076.22	1.1e-25	1	1
ENSOCUP00000009019	RRM_1	PF00076.22	1.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000004032	CSTF2-202	3841	-	ENSOCUP00000020817	553 (aa)	-	G1TUU1
ENSOCUT00000010469	CSTF2-201	1731	XM_002720386	ENSOCUP00000009019	576 (aa)	XP_002720432	G1SZC5

Gene Model

Click here to download ENSOCUG00000010468's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000010468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000010468	CSTF2	99	71.528	ENSOCUG00000004647	-	99	71.528

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000010468	CSTF2	100	95.321	ENSG00000101811	CSTF2	100	95.321	Homo_sapiens
ENSOCUG00000010468	CSTF2	100	89.901	ENSAMEG00000002082	CSTF2	100	89.901	Ailuropoda_melanoleuca
ENSOCUG00000010468	CSTF2	99	57.639	ENSACIG00000012852	cstf2	96	58.087	Amphilophus_citrinellus
ENSOCUG00000010468	CSTF2	99	58.904	ENSAOCG00000020905	cstf2	97	59.762	Amphiprion_ocellaris
ENSOCUG00000010468	CSTF2	99	58.904	ENSAPEG00000006526	cstf2	97	59.762	Amphiprion_percula
ENSOCUG00000010468	CSTF2	87	80.658	ENSATEG00000018186	cstf2	96	58.834	Anabas_testudineus
ENSOCUG00000010468	CSTF2	97	75.382	ENSAPLG00000007255	CSTF2	98	75.126	Anas_platyrhynchos
ENSOCUG00000010468	CSTF2	100	94.454	ENSANAG00000022342	CSTF2	100	94.454	Aotus_nancymaae
ENSOCUG00000010468	CSTF2	81	59.565	ENSACLG00000000779	cstf2	93	60.413	Astatotilapia_calliptera
ENSOCUG00000010468	CSTF2	71	98.413	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSOCUG00000010468	CSTF2	100	92.548	ENSBTAG00000003547	CSTF2	100	92.548	Bos_taurus
ENSOCUG00000010468	CSTF2	100	94.801	ENSCJAG00000004422	CSTF2	100	94.801	Callithrix_jacchus
ENSOCUG00000010468	CSTF2	100	93.241	ENSCAFG00000017551	CSTF2	100	93.241	Canis_familiaris
ENSOCUG00000010468	CSTF2	100	90.117	ENSCAFG00020007619	CSTF2	98	92.814	Canis_lupus_dingo
ENSOCUG00000010468	CSTF2	100	92.721	ENSCHIG00000016994	CSTF2	100	92.721	Capra_hircus
ENSOCUG00000010468	CSTF2	100	95.321	ENSTSYG00000006529	CSTF2	100	95.321	Carlito_syrichta
ENSOCUG00000010468	CSTF2	100	93.761	ENSCPOG00000015255	CSTF2	100	93.761	Cavia_porcellus
ENSOCUG00000010468	CSTF2	100	94.801	ENSCCAG00000032975	CSTF2	100	94.801	Cebus_capucinus
ENSOCUG00000010468	CSTF2	100	94.974	ENSCATG00000022835	CSTF2	100	94.974	Cercocebus_atys
ENSOCUG00000010468	CSTF2	100	93.414	ENSCLAG00000001904	CSTF2	100	93.414	Chinchilla_lanigera
ENSOCUG00000010468	CSTF2	100	91.792	ENSCSAG00000010360	CSTF2	100	91.792	Chlorocebus_sabaeus
ENSOCUG00000010468	CSTF2	68	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSOCUG00000010468	CSTF2	100	75.602	ENSCPBG00000014293	CSTF2	100	75.517	Chrysemys_picta_bellii
ENSOCUG00000010468	CSTF2	100	94.974	ENSCANG00000030612	CSTF2	100	94.974	Colobus_angolensis_palliatus
ENSOCUG00000010468	CSTF2	100	91.552	ENSCGRG00001023023	Cstf2	100	91.552	Cricetulus_griseus_chok1gshd
ENSOCUG00000010468	CSTF2	100	88.621	ENSCGRG00000003897	Cstf2	100	88.621	Cricetulus_griseus_crigri
ENSOCUG00000010468	CSTF2	87	83.817	ENSCVAG00000005731	cstf2	96	59.619	Cyprinodon_variegatus
ENSOCUG00000010468	CSTF2	71	98.182	ENSDARG00000090788	cstf2	93	92.188	Danio_rerio
ENSOCUG00000010468	CSTF2	100	89.983	ENSDORG00000007195	Cstf2	100	89.983	Dipodomys_ordii
ENSOCUG00000010468	CSTF2	72	93.243	ENSETEG00000004931	CSTF2	68	93.243	Echinops_telfairi
ENSOCUG00000010468	CSTF2	100	90.452	ENSEASG00005001216	CSTF2	100	90.452	Equus_asinus_asinus
ENSOCUG00000010468	CSTF2	100	93.588	ENSECAG00000009325	CSTF2	100	93.588	Equus_caballus
ENSOCUG00000010468	CSTF2	100	93.761	ENSFCAG00000007000	CSTF2	100	93.761	Felis_catus
ENSOCUG00000010468	CSTF2	92	72.982	ENSFALG00000003859	CSTF2	100	73.333	Ficedula_albicollis
ENSOCUG00000010468	CSTF2	100	94.454	ENSFDAG00000002416	CSTF2	100	94.454	Fukomys_damarensis
ENSOCUG00000010468	CSTF2	85	79.574	ENSFHEG00000017065	cstf2	93	60.690	Fundulus_heteroclitus
ENSOCUG00000010468	CSTF2	99	49.047	ENSGMOG00000005145	cstf2	99	56.627	Gadus_morhua
ENSOCUG00000010468	CSTF2	100	79.352	ENSGALG00000006760	CSTF2	100	79.181	Gallus_gallus
ENSOCUG00000010468	CSTF2	88	80.723	ENSGAFG00000020027	cstf2	96	59.655	Gambusia_affinis
ENSOCUG00000010468	CSTF2	99	56.672	ENSGACG00000017326	cstf2	82	75.000	Gasterosteus_aculeatus
ENSOCUG00000010468	CSTF2	100	77.759	ENSGAGG00000006037	CSTF2	100	77.651	Gopherus_agassizii
ENSOCUG00000010468	CSTF2	100	95.321	ENSGGOG00000022267	CSTF2	100	95.321	Gorilla_gorilla
ENSOCUG00000010468	CSTF2	81	59.783	ENSHBUG00000016183	cstf2	93	60.345	Haplochromis_burtoni
ENSOCUG00000010468	CSTF2	100	80.243	ENSHGLG00000013455	-	100	80.243	Heterocephalus_glaber_female
ENSOCUG00000010468	CSTF2	100	94.454	ENSHGLG00000000659	-	100	94.454	Heterocephalus_glaber_female
ENSOCUG00000010468	CSTF2	100	94.454	ENSHGLG00100001130	-	100	94.454	Heterocephalus_glaber_male
ENSOCUG00000010468	CSTF2	100	80.416	ENSHGLG00100015391	-	100	80.416	Heterocephalus_glaber_male
ENSOCUG00000010468	CSTF2	99	63.592	ENSHCOG00000005157	cstf2	97	60.208	Hippocampus_comes
ENSOCUG00000010468	CSTF2	100	70.726	ENSIPUG00000017839	cstf2	99	59.796	Ictalurus_punctatus
ENSOCUG00000010468	CSTF2	100	93.588	ENSSTOG00000023445	CSTF2	100	93.588	Ictidomys_tridecemlineatus
ENSOCUG00000010468	CSTF2	100	92.374	ENSJJAG00000020507	Cstf2	100	92.374	Jaculus_jaculus
ENSOCUG00000010468	CSTF2	54	94.915	ENSLBEG00000028720	cstf2	83	89.062	Labrus_bergylta
ENSOCUG00000010468	CSTF2	99	65.574	ENSLACG00000015927	CSTF2	99	64.390	Latimeria_chalumnae
ENSOCUG00000010468	CSTF2	99	64.948	ENSLOCG00000015300	cstf2	93	63.993	Lepisosteus_oculatus
ENSOCUG00000010468	CSTF2	100	89.863	ENSLAFG00000000474	CSTF2	100	89.863	Loxodonta_africana
ENSOCUG00000010468	CSTF2	100	94.974	ENSMFAG00000043888	CSTF2	100	94.974	Macaca_fascicularis
ENSOCUG00000010468	CSTF2	97	94.306	ENSMMUG00000013008	CSTF2	99	94.306	Macaca_mulatta
ENSOCUG00000010468	CSTF2	100	94.974	ENSMNEG00000041824	CSTF2	100	94.974	Macaca_nemestrina
ENSOCUG00000010468	CSTF2	100	94.974	ENSMLEG00000036870	CSTF2	100	94.974	Mandrillus_leucophaeus
ENSOCUG00000010468	CSTF2	97	56.050	ENSMAMG00000020364	cstf2	96	58.627	Mastacembelus_armatus
ENSOCUG00000010468	CSTF2	81	59.565	ENSMZEG00005007200	cstf2	96	60.413	Maylandia_zebra
ENSOCUG00000010468	CSTF2	93	87.838	ENSMGAG00000004139	CSTF2	88	87.838	Meleagris_gallopavo
ENSOCUG00000010468	CSTF2	100	91.897	ENSMAUG00000000965	Cstf2	100	91.897	Mesocricetus_auratus
ENSOCUG00000010468	CSTF2	100	94.974	ENSMICG00000014121	CSTF2	100	94.974	Microcebus_murinus
ENSOCUG00000010468	CSTF2	100	90.345	ENSMOCG00000008081	Cstf2	100	90.345	Microtus_ochrogaster
ENSOCUG00000010468	CSTF2	99	57.908	ENSMMOG00000000538	cstf2	97	53.846	Mola_mola
ENSOCUG00000010468	CSTF2	100	78.218	ENSMODG00000011785	CSTF2	100	79.373	Monodelphis_domestica
ENSOCUG00000010468	CSTF2	100	92.069	MGP_CAROLIEiJ_G0033383	Cstf2	100	92.069	Mus_caroli
ENSOCUG00000010468	CSTF2	100	92.069	ENSMUSG00000031256	Cstf2	100	92.069	Mus_musculus
ENSOCUG00000010468	CSTF2	100	92.055	MGP_PahariEiJ_G0031923	Cstf2	100	92.228	Mus_pahari
ENSOCUG00000010468	CSTF2	100	91.897	MGP_SPRETEiJ_G0034548	Cstf2	100	91.897	Mus_spretus
ENSOCUG00000010468	CSTF2	100	85.556	ENSMPUG00000002339	CSTF2	100	85.556	Mustela_putorius_furo
ENSOCUG00000010468	CSTF2	100	84.261	ENSMLUG00000004598	CSTF2	98	84.261	Myotis_lucifugus
ENSOCUG00000010468	CSTF2	100	93.264	ENSNGAG00000021985	Cstf2	100	93.437	Nannospalax_galili
ENSOCUG00000010468	CSTF2	92	61.823	ENSNBRG00000021694	cstf2	100	55.357	Neolamprologus_brichardi
ENSOCUG00000010468	CSTF2	100	94.974	ENSNLEG00000007510	CSTF2	100	94.974	Nomascus_leucogenys
ENSOCUG00000010468	CSTF2	91	79.848	ENSMEUG00000014025	-	100	81.179	Notamacropus_eugenii
ENSOCUG00000010468	CSTF2	100	81.976	ENSMEUG00000011186	-	100	83.882	Notamacropus_eugenii
ENSOCUG00000010468	CSTF2	100	77.990	ENSMEUG00000007875	-	100	79.203	Notamacropus_eugenii
ENSOCUG00000010468	CSTF2	76	95.050	ENSOPRG00000003106	CSTF2	87	83.154	Ochotona_princeps
ENSOCUG00000010468	CSTF2	100	92.721	ENSODEG00000002059	CSTF2	100	92.721	Octodon_degus
ENSOCUG00000010468	CSTF2	99	55.016	ENSONIG00000002631	cstf2	99	56.143	Oreochromis_niloticus
ENSOCUG00000010468	CSTF2	91	80.984	ENSOANG00000004208	CSTF2	87	88.571	Ornithorhynchus_anatinus
ENSOCUG00000010468	CSTF2	86	81.328	ENSORLG00000001380	cstf2	97	57.363	Oryzias_latipes
ENSOCUG00000010468	CSTF2	86	81.328	ENSORLG00020021917	cstf2	97	57.313	Oryzias_latipes_hni
ENSOCUG00000010468	CSTF2	86	81.328	ENSORLG00015011996	cstf2	97	57.363	Oryzias_latipes_hsok
ENSOCUG00000010468	CSTF2	99	59.266	ENSOMEG00000015507	cstf2	97	59.075	Oryzias_melastigma
ENSOCUG00000010468	CSTF2	100	86.645	ENSOGAG00000011192	CSTF2	100	85.533	Otolemur_garnettii
ENSOCUG00000010468	CSTF2	100	92.721	ENSOARG00000001022	CSTF2	100	92.721	Ovis_aries
ENSOCUG00000010468	CSTF2	100	95.321	ENSPPAG00000031804	CSTF2	100	95.321	Pan_paniscus
ENSOCUG00000010468	CSTF2	100	93.934	ENSPPRG00000022492	CSTF2	100	93.934	Panthera_pardus
ENSOCUG00000010468	CSTF2	100	93.588	ENSPTIG00000009922	CSTF2	100	93.588	Panthera_tigris_altaica
ENSOCUG00000010468	CSTF2	100	95.321	ENSPTRG00000022090	CSTF2	100	95.321	Pan_troglodytes
ENSOCUG00000010468	CSTF2	100	94.974	ENSPANG00000002303	CSTF2	100	94.974	Papio_anubis
ENSOCUG00000010468	CSTF2	99	62.957	ENSPKIG00000005033	cstf2	97	61.419	Paramormyrops_kingsleyae
ENSOCUG00000010468	CSTF2	99	59.804	ENSPMGG00000006534	cstf2	97	58.744	Periophthalmus_magnuspinnatus
ENSOCUG00000010468	CSTF2	100	90.862	ENSPEMG00000019415	Cstf2	100	90.862	Peromyscus_maniculatus_bairdii
ENSOCUG00000010468	CSTF2	97	81.658	ENSPCIG00000002989	CSTF2	100	79.475	Phascolarctos_cinereus
ENSOCUG00000010468	CSTF2	58	71.642	ENSPREG00000011481	cstf2	97	60.309	Poecilia_reticulata
ENSOCUG00000010468	CSTF2	100	91.960	ENSPPYG00000020541	CSTF2	100	91.960	Pongo_abelii
ENSOCUG00000010468	CSTF2	100	94.627	ENSPCOG00000027744	CSTF2	100	94.627	Propithecus_coquereli
ENSOCUG00000010468	CSTF2	97	78.636	ENSPVAG00000008342	CSTF2	100	78.636	Pteropus_vampyrus
ENSOCUG00000010468	CSTF2	91	72.010	ENSPNAG00000018887	cstf2	97	62.630	Pygocentrus_nattereri
ENSOCUG00000010468	CSTF2	100	91.379	ENSRNOG00000048025	Cstf2	100	91.379	Rattus_norvegicus
ENSOCUG00000010468	CSTF2	100	93.750	ENSRBIG00000030745	CSTF2	100	93.750	Rhinopithecus_bieti
ENSOCUG00000010468	CSTF2	100	94.281	ENSRROG00000045042	CSTF2	100	94.281	Rhinopithecus_roxellana
ENSOCUG00000010468	CSTF2	100	94.454	ENSSBOG00000021649	CSTF2	100	94.454	Saimiri_boliviensis_boliviensis
ENSOCUG00000010468	CSTF2	98	100.000	ENSSHAG00000003681	CSTF2	87	94.286	Sarcophilus_harrisii
ENSOCUG00000010468	CSTF2	99	63.511	ENSSFOG00015006348	cstf2	97	63.481	Scleropages_formosus
ENSOCUG00000010468	CSTF2	77	63.927	ENSSMAG00000013463	cstf2	96	59.725	Scophthalmus_maximus
ENSOCUG00000010468	CSTF2	89	76.626	ENSSPUG00000005288	-	97	79.873	Sphenodon_punctatus
ENSOCUG00000010468	CSTF2	100	92.548	ENSSSCG00000012486	CSTF2	100	92.548	Sus_scrofa
ENSOCUG00000010468	CSTF2	100	78.401	ENSTGUG00000002253	CSTF2	100	78.741	Taeniopygia_guttata
ENSOCUG00000010468	CSTF2	99	58.516	ENSTNIG00000016860	cstf2	99	58.249	Tetraodon_nigroviridis
ENSOCUG00000010468	CSTF2	53	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSOCUG00000010468	CSTF2	100	93.588	ENSTTRG00000013556	CSTF2	100	93.588	Tursiops_truncatus
ENSOCUG00000010468	CSTF2	100	93.471	ENSUAMG00000026605	CSTF2	100	93.471	Ursus_americanus
ENSOCUG00000010468	CSTF2	100	87.002	ENSUMAG00000012417	CSTF2	100	95.848	Ursus_maritimus
ENSOCUG00000010468	CSTF2	73	93.003	ENSVPAG00000006466	CSTF2	72	93.003	Vicugna_pacos
ENSOCUG00000010468	CSTF2	100	93.414	ENSVVUG00000004717	CSTF2	100	93.414	Vulpes_vulpes
ENSOCUG00000010468	CSTF2	82	87.143	ENSXETG00000009642	cstf2	87	87.143	Xenopus_tropicalis
ENSOCUG00000010468	CSTF2	99	56.326	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus
ENSOCUG00000010468	CSTF2	59	71.429	ENSXMAG00000013524	cstf2	97	55.929	Xiphophorus_maculatus