EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000010840 (Gene tree)
Gene ID: -
Gene Symbol: SPEN
Alias: -
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 65921 bases
Position: chrGL018791:421693-487613
Accession: 17575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000009327	RRM_5	PF13893.6	1.8e-07	1	1
ENSOCUP00000009327	RRM_1	PF00076.22	3.1e-34	1	3
ENSOCUP00000009327	RRM_1	PF00076.22	3.1e-34	2	3
ENSOCUP00000009327	RRM_1	PF00076.22	3.1e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000010842	SPEN-201	10821	-	ENSOCUP00000009327	3606 (aa)	-	G1T033

Gene Model

Click here to download ENSOCUG00000010840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000010840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000010840	SPEN	99	83.009	ENSG00000065526	SPEN	99	97.667	Homo_sapiens
ENSOCUG00000010840	SPEN	83	75.377	ENSAPOG00000011411	si:ch1073-335m2.2	68	75.377	Acanthochromis_polyacanthus
ENSOCUG00000010840	SPEN	93	81.421	ENSAPOG00000009853	-	90	61.049	Acanthochromis_polyacanthus
ENSOCUG00000010840	SPEN	99	82.832	ENSAMEG00000011817	SPEN	99	83.103	Ailuropoda_melanoleuca
ENSOCUG00000010840	SPEN	71	68.712	ENSAOCG00000008077	si:ch1073-335m2.2	63	68.712	Amphiprion_ocellaris
ENSOCUG00000010840	SPEN	97	62.353	ENSAOCG00000014505	-	69	52.665	Amphiprion_ocellaris
ENSOCUG00000010840	SPEN	86	62.353	ENSAPEG00000010288	-	69	52.665	Amphiprion_percula
ENSOCUG00000010840	SPEN	80	68.712	ENSAPEG00000013515	si:ch1073-335m2.2	87	68.712	Amphiprion_percula
ENSOCUG00000010840	SPEN	97	62.941	ENSATEG00000005627	-	69	53.420	Anabas_testudineus
ENSOCUG00000010840	SPEN	64	80.874	ENSATEG00000007674	si:ch1073-335m2.2	66	80.874	Anabas_testudineus
ENSOCUG00000010840	SPEN	99	82.672	ENSANAG00000034428	SPEN	99	82.487	Aotus_nancymaae
ENSOCUG00000010840	SPEN	97	63.743	ENSACLG00000016922	-	69	52.227	Astatotilapia_calliptera
ENSOCUG00000010840	SPEN	58	84.211	ENSACLG00000021433	si:ch1073-335m2.2	67	84.211	Astatotilapia_calliptera
ENSOCUG00000010840	SPEN	86	62.573	ENSAMXG00000012485	spen	90	46.938	Astyanax_mexicanus
ENSOCUG00000010840	SPEN	99	82.067	ENSBTAG00000018729	SPEN	99	81.950	Bos_taurus
ENSOCUG00000010840	SPEN	99	89.109	ENSCJAG00000008527	SPEN	99	81.845	Callithrix_jacchus
ENSOCUG00000010840	SPEN	88	80.208	ENSCAFG00000016132	-	96	84.917	Canis_familiaris
ENSOCUG00000010840	SPEN	99	82.690	ENSCHIG00000025070	SPEN	99	82.396	Capra_hircus
ENSOCUG00000010840	SPEN	92	82.130	ENSTSYG00000036016	SPEN	99	82.316	Carlito_syrichta
ENSOCUG00000010840	SPEN	99	76.622	ENSCAPG00000013803	SPEN	100	76.952	Cavia_aperea
ENSOCUG00000010840	SPEN	99	77.141	ENSCPOG00000014036	SPEN	100	77.474	Cavia_porcellus
ENSOCUG00000010840	SPEN	99	77.691	ENSCCAG00000020258	SPEN	99	80.948	Cebus_capucinus
ENSOCUG00000010840	SPEN	95	87.402	ENSCATG00000015079	SPEN	99	82.847	Cercocebus_atys
ENSOCUG00000010840	SPEN	99	79.208	ENSCLAG00000002018	SPEN	100	78.805	Chinchilla_lanigera
ENSOCUG00000010840	SPEN	99	83.158	ENSCSAG00000000841	SPEN	99	83.239	Chlorocebus_sabaeus
ENSOCUG00000010840	SPEN	99	82.243	ENSCANG00000034547	SPEN	99	81.971	Colobus_angolensis_palliatus
ENSOCUG00000010840	SPEN	99	77.711	ENSCGRG00001007725	Spen	99	77.632	Cricetulus_griseus_chok1gshd
ENSOCUG00000010840	SPEN	99	77.552	ENSCGRG00000010581	Spen	100	77.336	Cricetulus_griseus_crigri
ENSOCUG00000010840	SPEN	69	64.118	ENSCSEG00000003915	-	90	44.185	Cynoglossus_semilaevis
ENSOCUG00000010840	SPEN	79	75.362	ENSCVAG00000009075	si:ch1073-335m2.2	65	75.362	Cyprinodon_variegatus
ENSOCUG00000010840	SPEN	97	42.547	ENSCVAG00000016346	-	69	51.908	Cyprinodon_variegatus
ENSOCUG00000010840	SPEN	87	46.921	ENSDARG00000074245	spen	94	75.591	Danio_rerio
ENSOCUG00000010840	SPEN	58	62.451	ENSDARG00000074332	si:ch1073-335m2.2	64	62.451	Danio_rerio
ENSOCUG00000010840	SPEN	99	81.614	ENSDNOG00000041948	SPEN	99	81.749	Dasypus_novemcinctus
ENSOCUG00000010840	SPEN	99	77.184	ENSDORG00000023909	Spen	100	77.020	Dipodomys_ordii
ENSOCUG00000010840	SPEN	68	85.714	ENSETEG00000016692	-	66	85.714	Echinops_telfairi
ENSOCUG00000010840	SPEN	95	87.402	ENSEASG00005015911	SPEN	99	83.475	Equus_asinus_asinus
ENSOCUG00000010840	SPEN	99	83.455	ENSECAG00000008833	SPEN	99	83.593	Equus_caballus
ENSOCUG00000010840	SPEN	71	95.349	ENSEEUG00000010255	SPEN	76	95.349	Erinaceus_europaeus
ENSOCUG00000010840	SPEN	65	80.663	ENSELUG00000007726	si:ch1073-335m2.2	65	81.111	Esox_lucius
ENSOCUG00000010840	SPEN	99	78.163	ENSFDAG00000010212	SPEN	100	78.372	Fukomys_damarensis
ENSOCUG00000010840	SPEN	79	73.913	ENSFHEG00000004544	si:ch1073-335m2.2	54	74.396	Fundulus_heteroclitus
ENSOCUG00000010840	SPEN	63	80.447	ENSGMOG00000008156	si:ch1073-335m2.2	67	80.447	Gadus_morhua
ENSOCUG00000010840	SPEN	69	50.421	ENSGMOG00000008397	-	66	60.819	Gadus_morhua
ENSOCUG00000010840	SPEN	97	42.536	ENSGAFG00000015819	-	90	60.300	Gambusia_affinis
ENSOCUG00000010840	SPEN	77	80.588	ENSGACG00000001176	si:ch1073-335m2.2	63	80.588	Gasterosteus_aculeatus
ENSOCUG00000010840	SPEN	97	66.888	ENSGAGG00000020785	SPEN	99	66.888	Gopherus_agassizii
ENSOCUG00000010840	SPEN	99	82.864	ENSGGOG00000012041	SPEN	99	82.837	Gorilla_gorilla
ENSOCUG00000010840	SPEN	64	84.211	ENSHBUG00000023253	si:ch1073-335m2.2	67	84.211	Haplochromis_burtoni
ENSOCUG00000010840	SPEN	97	63.743	ENSHBUG00000020626	-	69	52.245	Haplochromis_burtoni
ENSOCUG00000010840	SPEN	99	77.232	ENSHGLG00000019259	SPEN	99	77.499	Heterocephalus_glaber_female
ENSOCUG00000010840	SPEN	89	80.000	ENSHGLG00100019294	SPEN	95	80.000	Heterocephalus_glaber_male
ENSOCUG00000010840	SPEN	76	60.199	ENSHCOG00000006004	si:ch1073-335m2.2	65	60.199	Hippocampus_comes
ENSOCUG00000010840	SPEN	73	77.273	ENSIPUG00000018212	si:ch1073-335m2.2	70	77.273	Ictalurus_punctatus
ENSOCUG00000010840	SPEN	97	62.209	ENSIPUG00000021668	spen	88	61.714	Ictalurus_punctatus
ENSOCUG00000010840	SPEN	99	83.155	ENSSTOG00000021428	SPEN	100	83.760	Ictidomys_tridecemlineatus
ENSOCUG00000010840	SPEN	99	79.327	ENSJJAG00000010882	Spen	99	79.381	Jaculus_jaculus
ENSOCUG00000010840	SPEN	69	62.353	ENSKMAG00000003882	-	69	51.501	Kryptolebias_marmoratus
ENSOCUG00000010840	SPEN	72	74.384	ENSKMAG00000021725	si:ch1073-335m2.2	63	74.384	Kryptolebias_marmoratus
ENSOCUG00000010840	SPEN	83	41.873	ENSLBEG00000019129	-	71	44.912	Labrus_bergylta
ENSOCUG00000010840	SPEN	57	76.796	ENSLBEG00000020855	si:ch1073-335m2.2	59	76.796	Labrus_bergylta
ENSOCUG00000010840	SPEN	78	80.392	ENSLACG00000003258	SPEN	73	80.392	Latimeria_chalumnae
ENSOCUG00000010840	SPEN	97	52.220	ENSLOCG00000007896	si:ch1073-335m2.2	99	52.090	Lepisosteus_oculatus
ENSOCUG00000010840	SPEN	99	82.387	ENSLAFG00000004524	SPEN	100	82.085	Loxodonta_africana
ENSOCUG00000010840	SPEN	99	82.788	ENSMFAG00000041974	SPEN	99	82.815	Macaca_fascicularis
ENSOCUG00000010840	SPEN	99	82.761	ENSMMUG00000008026	SPEN	99	82.846	Macaca_mulatta
ENSOCUG00000010840	SPEN	99	82.874	ENSMNEG00000042402	SPEN	99	82.901	Macaca_nemestrina
ENSOCUG00000010840	SPEN	99	83.356	ENSMLEG00000039293	SPEN	99	83.247	Mandrillus_leucophaeus
ENSOCUG00000010840	SPEN	62	69.231	ENSMAMG00000023870	si:ch1073-335m2.2	64	69.231	Mastacembelus_armatus
ENSOCUG00000010840	SPEN	88	42.134	ENSMZEG00005021491	-	65	50.864	Maylandia_zebra
ENSOCUG00000010840	SPEN	58	84.211	ENSMZEG00005011762	si:ch1073-335m2.2	67	84.211	Maylandia_zebra
ENSOCUG00000010840	SPEN	99	76.350	ENSMAUG00000008318	Spen	99	76.378	Mesocricetus_auratus
ENSOCUG00000010840	SPEN	99	83.478	ENSMICG00000030994	SPEN	99	83.261	Microcebus_murinus
ENSOCUG00000010840	SPEN	99	78.698	ENSMOCG00000016083	Spen	99	78.515	Microtus_ochrogaster
ENSOCUG00000010840	SPEN	50	80.447	ENSMMOG00000021742	si:ch1073-335m2.2	55	80.447	Mola_mola
ENSOCUG00000010840	SPEN	97	61.765	ENSMALG00000008625	-	79	48.291	Monopterus_albus
ENSOCUG00000010840	SPEN	99	77.632	MGP_CAROLIEiJ_G0026745	Spen	99	77.399	Mus_caroli
ENSOCUG00000010840	SPEN	99	77.009	ENSMUSG00000040761	Spen	99	77.007	Mus_musculus
ENSOCUG00000010840	SPEN	99	76.750	MGP_PahariEiJ_G0029076	Spen	99	76.892	Mus_pahari
ENSOCUG00000010840	SPEN	99	77.070	MGP_SPRETEiJ_G0027724	Spen	99	77.124	Mus_spretus
ENSOCUG00000010840	SPEN	98	82.484	ENSMPUG00000016317	SPEN	100	82.748	Mustela_putorius_furo
ENSOCUG00000010840	SPEN	94	81.862	ENSMLUG00000010144	SPEN	99	89.564	Myotis_lucifugus
ENSOCUG00000010840	SPEN	99	75.995	ENSNGAG00000000641	Spen	95	85.998	Nannospalax_galili
ENSOCUG00000010840	SPEN	83	42.457	ENSNBRG00000022090	-	64	45.951	Neolamprologus_brichardi
ENSOCUG00000010840	SPEN	56	84.211	ENSNBRG00000005733	si:ch1073-335m2.2	67	84.211	Neolamprologus_brichardi
ENSOCUG00000010840	SPEN	99	83.238	ENSNLEG00000007652	SPEN	99	83.211	Nomascus_leucogenys
ENSOCUG00000010840	SPEN	87	93.750	ENSMEUG00000002422	SPEN	90	93.750	Notamacropus_eugenii
ENSOCUG00000010840	SPEN	93	86.583	ENSOPRG00000015800	SPEN	93	86.583	Ochotona_princeps
ENSOCUG00000010840	SPEN	97	44.345	ENSONIG00000006573	-	98	74.725	Oreochromis_niloticus
ENSOCUG00000010840	SPEN	68	77.665	ENSORLG00000028894	-	75	81.250	Oryzias_latipes
ENSOCUG00000010840	SPEN	78	81.871	ENSORLG00020009351	si:ch1073-335m2.2	87	68.468	Oryzias_latipes_hni
ENSOCUG00000010840	SPEN	64	77.665	ENSORLG00020007735	-	74	77.665	Oryzias_latipes_hni
ENSOCUG00000010840	SPEN	77	81.287	ENSORLG00015005537	si:ch1073-335m2.2	86	65.625	Oryzias_latipes_hsok
ENSOCUG00000010840	SPEN	88	77.665	ENSORLG00015022085	-	73	77.665	Oryzias_latipes_hsok
ENSOCUG00000010840	SPEN	78	83.908	ENSOMEG00000007639	-	72	83.908	Oryzias_melastigma
ENSOCUG00000010840	SPEN	71	67.890	ENSOMEG00000004509	si:ch1073-335m2.2	87	67.544	Oryzias_melastigma
ENSOCUG00000010840	SPEN	99	82.305	ENSOGAG00000025110	SPEN	99	82.170	Otolemur_garnettii
ENSOCUG00000010840	SPEN	99	82.642	ENSOARG00000008477	SPEN	99	82.505	Ovis_aries
ENSOCUG00000010840	SPEN	99	83.351	ENSPPAG00000035690	SPEN	100	83.161	Pan_paniscus
ENSOCUG00000010840	SPEN	99	83.009	ENSPTRG00000000210	SPEN	99	82.819	Pan_troglodytes
ENSOCUG00000010840	SPEN	99	81.821	ENSPANG00000006293	SPEN	99	81.740	Papio_anubis
ENSOCUG00000010840	SPEN	79	53.558	ENSPKIG00000002617	SPEN	90	65.428	Paramormyrops_kingsleyae
ENSOCUG00000010840	SPEN	79	54.948	ENSPKIG00000010492	si:ch1073-335m2.2	78	64.162	Paramormyrops_kingsleyae
ENSOCUG00000010840	SPEN	99	78.856	ENSPEMG00000022997	Spen	100	78.746	Peromyscus_maniculatus_bairdii
ENSOCUG00000010840	SPEN	63	76.119	ENSPLAG00000016625	si:ch1073-335m2.2	71	76.119	Poecilia_latipinna
ENSOCUG00000010840	SPEN	97	42.537	ENSPMEG00000006764	-	90	60.300	Poecilia_mexicana
ENSOCUG00000010840	SPEN	53	85.207	ENSPREG00000005357	si:ch1073-335m2.2	58	85.207	Poecilia_reticulata
ENSOCUG00000010840	SPEN	97	42.225	ENSPREG00000010399	-	90	60.300	Poecilia_reticulata
ENSOCUG00000010840	SPEN	99	83.270	ENSPPYG00000001834	SPEN	99	83.243	Pongo_abelii
ENSOCUG00000010840	SPEN	88	91.459	ENSPCAG00000009543	SPEN	92	87.654	Procavia_capensis
ENSOCUG00000010840	SPEN	99	82.370	ENSPCOG00000021735	SPEN	99	82.289	Propithecus_coquereli
ENSOCUG00000010840	SPEN	84	87.469	ENSPVAG00000013794	SPEN	83	87.542	Pteropus_vampyrus
ENSOCUG00000010840	SPEN	97	63.743	ENSPNYG00000012379	-	69	52.227	Pundamilia_nyererei
ENSOCUG00000010840	SPEN	58	84.211	ENSPNYG00000009042	si:ch1073-335m2.2	67	84.211	Pundamilia_nyererei
ENSOCUG00000010840	SPEN	76	71.090	ENSPNAG00000011452	si:ch1073-335m2.2	68	71.090	Pygocentrus_nattereri
ENSOCUG00000010840	SPEN	99	77.671	ENSRNOG00000033556	Spen	100	77.473	Rattus_norvegicus
ENSOCUG00000010840	SPEN	99	83.757	ENSRBIG00000039654	SPEN	100	83.538	Rhinopithecus_bieti
ENSOCUG00000010840	SPEN	99	83.220	ENSRROG00000035686	SPEN	100	82.958	Rhinopithecus_roxellana
ENSOCUG00000010840	SPEN	99	80.542	ENSSBOG00000028770	SPEN	99	80.383	Saimiri_boliviensis_boliviensis
ENSOCUG00000010840	SPEN	97	66.839	ENSSHAG00000004960	SPEN	99	87.925	Sarcophilus_harrisii
ENSOCUG00000010840	SPEN	83	84.211	ENSSFOG00015010267	si:ch1073-335m2.2	88	83.505	Scleropages_formosus
ENSOCUG00000010840	SPEN	62	73.558	ENSSMAG00000000125	si:ch1073-335m2.2	65	73.558	Scophthalmus_maximus
ENSOCUG00000010840	SPEN	97	62.353	ENSSMAG00000008996	-	69	53.110	Scophthalmus_maximus
ENSOCUG00000010840	SPEN	96	68.667	ENSSDUG00000003476	-	90	61.710	Seriola_dumerili
ENSOCUG00000010840	SPEN	73	74.038	ENSSDUG00000008416	si:ch1073-335m2.2	62	83.626	Seriola_dumerili
ENSOCUG00000010840	SPEN	75	74.038	ENSSLDG00000023347	si:ch1073-335m2.2	63	74.038	Seriola_lalandi_dorsalis
ENSOCUG00000010840	SPEN	97	62.941	ENSSLDG00000012950	-	90	61.710	Seriola_lalandi_dorsalis
ENSOCUG00000010840	SPEN	86	66.704	ENSSPUG00000001866	-	100	66.704	Sphenodon_punctatus
ENSOCUG00000010840	SPEN	97	62.941	ENSSPAG00000006014	-	90	61.423	Stegastes_partitus
ENSOCUG00000010840	SPEN	77	84.211	ENSSPAG00000012454	si:ch1073-335m2.2	85	84.211	Stegastes_partitus
ENSOCUG00000010840	SPEN	85	82.306	ENSSSCG00000034484	SPEN	99	81.619	Sus_scrofa
ENSOCUG00000010840	SPEN	97	42.581	ENSTRUG00000024350	-	69	52.073	Takifugu_rubripes
ENSOCUG00000010840	SPEN	79	82.456	ENSTNIG00000014666	si:ch1073-335m2.2	75	82.456	Tetraodon_nigroviridis
ENSOCUG00000010840	SPEN	83	71.705	ENSTNIG00000010907	-	69	71.584	Tetraodon_nigroviridis
ENSOCUG00000010840	SPEN	78	94.393	ENSTBEG00000003628	SPEN	77	94.393	Tupaia_belangeri
ENSOCUG00000010840	SPEN	79	95.184	ENSTTRG00000015704	SPEN	79	95.184	Tursiops_truncatus
ENSOCUG00000010840	SPEN	99	83.320	ENSUAMG00000009600	SPEN	99	83.423	Ursus_americanus
ENSOCUG00000010840	SPEN	99	82.351	ENSUMAG00000021641	SPEN	99	83.030	Ursus_maritimus
ENSOCUG00000010840	SPEN	95	87.402	ENSVVUG00000028951	SPEN	100	82.921	Vulpes_vulpes
ENSOCUG00000010840	SPEN	56	84.024	ENSXCOG00000004516	si:ch1073-335m2.2	61	84.024	Xiphophorus_couchianus
ENSOCUG00000010840	SPEN	63	75.124	ENSXMAG00000029887	si:ch1073-335m2.2	66	75.124	Xiphophorus_maculatus
ENSOCUG00000010840	SPEN	97	42.098	ENSXMAG00000021384	-	90	58.427	Xiphophorus_maculatus