EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000010953 (Gene tree)
Gene ID: 100350628
Gene Symbol: ZNF408
Alias: -
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 4909 bases
Position: chr1:186070979-186075887
Accession: 100350628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000020273	zf-C2H2	PF00096.26	3.3e-40	1	8
ENSOCUP00000020273	zf-C2H2	PF00096.26	3.3e-40	2	8
ENSOCUP00000020273	zf-C2H2	PF00096.26	3.3e-40	3	8
ENSOCUP00000020273	zf-C2H2	PF00096.26	3.3e-40	4	8
ENSOCUP00000020273	zf-C2H2	PF00096.26	3.3e-40	5	8
ENSOCUP00000020273	zf-C2H2	PF00096.26	3.3e-40	6	8
ENSOCUP00000020273	zf-C2H2	PF00096.26	3.3e-40	7	8
ENSOCUP00000020273	zf-C2H2	PF00096.26	3.3e-40	8	8
ENSOCUP00000020273	zf-met	PF12874.7	9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000021849	ZNF408-201	2133	XM_002709081	ENSOCUP00000020273	710 (aa)	XP_002709127	G1TTA3

Gene Model

Click here to download ENSOCUG00000010953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000010953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000010953	ZNF408	60	40.989	ENSOCUG00000029276	-	82	40.989
ENSOCUG00000010953	ZNF408	54	38.762	ENSOCUG00000029223	ZNF699	80	40.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000010953	ZNF408	98	78.510	ENSG00000175213	ZNF408	100	77.917	Homo_sapiens
ENSOCUG00000010953	ZNF408	100	75.310	ENSAMEG00000006904	ZNF408	100	75.310	Ailuropoda_melanoleuca
ENSOCUG00000010953	ZNF408	98	73.039	ENSANAG00000036294	ZNF408	94	79.642	Aotus_nancymaae
ENSOCUG00000010953	ZNF408	94	39.234	ENSAMXG00000032642	znf408	94	39.102	Astyanax_mexicanus
ENSOCUG00000010953	ZNF408	98	78.797	ENSCJAG00000019859	ZNF408	100	78.056	Callithrix_jacchus
ENSOCUG00000010953	ZNF408	100	75.720	ENSCAFG00000009143	ZNF408	97	75.857	Canis_familiaris
ENSOCUG00000010953	ZNF408	100	75.583	ENSCAFG00020019155	ZNF408	97	75.720	Canis_lupus_dingo
ENSOCUG00000010953	ZNF408	83	73.445	ENSCHIG00000025346	ZNF408	97	74.329	Capra_hircus
ENSOCUG00000010953	ZNF408	100	74.791	ENSTSYG00000025443	ZNF408	100	75.905	Carlito_syrichta
ENSOCUG00000010953	ZNF408	98	77.650	ENSCCAG00000029472	ZNF408	100	76.944	Cebus_capucinus
ENSOCUG00000010953	ZNF408	55	96.181	ENSCHOG00000009909	ZNF408	74	96.181	Choloepus_hoffmanni
ENSOCUG00000010953	ZNF408	100	68.100	ENSCGRG00001023588	Zfp408	100	67.961	Cricetulus_griseus_chok1gshd
ENSOCUG00000010953	ZNF408	100	68.100	ENSCGRG00000017618	Zfp408	100	67.961	Cricetulus_griseus_crigri
ENSOCUG00000010953	ZNF408	100	71.884	ENSDNOG00000047669	ZNF408	100	71.884	Dasypus_novemcinctus
ENSOCUG00000010953	ZNF408	99	67.373	ENSDORG00000000387	Zfp408	99	67.373	Dipodomys_ordii
ENSOCUG00000010953	ZNF408	82	64.833	ENSETEG00000017621	-	100	61.828	Echinops_telfairi
ENSOCUG00000010953	ZNF408	100	75.103	ENSEASG00005015461	ZNF408	100	75.103	Equus_asinus_asinus
ENSOCUG00000010953	ZNF408	100	74.828	ENSECAG00000010878	ZNF408	100	74.828	Equus_caballus
ENSOCUG00000010953	ZNF408	95	67.158	ENSEEUG00000010466	ZNF408	94	67.456	Erinaceus_europaeus
ENSOCUG00000010953	ZNF408	100	77.051	ENSFCAG00000029105	ZNF408	100	77.051	Felis_catus
ENSOCUG00000010953	ZNF408	80	38.658	ENSFHEG00000016754	-	76	38.915	Fundulus_heteroclitus
ENSOCUG00000010953	ZNF408	94	36.562	ENSGAFG00000018557	-	83	40.224	Gambusia_affinis
ENSOCUG00000010953	ZNF408	98	78.080	ENSGGOG00000010152	ZNF408	100	77.500	Gorilla_gorilla
ENSOCUG00000010953	ZNF408	86	76.214	ENSLAFG00000027848	ZNF408	99	76.214	Loxodonta_africana
ENSOCUG00000010953	ZNF408	98	78.940	ENSMICG00000045320	ZNF408	100	78.303	Microcebus_murinus
ENSOCUG00000010953	ZNF408	74	53.786	ENSMODG00000019895	-	84	54.731	Monodelphis_domestica
ENSOCUG00000010953	ZNF408	97	76.890	ENSMPUG00000005490	ZNF408	100	76.210	Mustela_putorius_furo
ENSOCUG00000010953	ZNF408	99	69.317	ENSNGAG00000000309	Zfp408	99	69.456	Nannospalax_galili
ENSOCUG00000010953	ZNF408	100	77.159	ENSNLEG00000014132	ZNF408	100	77.159	Nomascus_leucogenys
ENSOCUG00000010953	ZNF408	99	66.104	ENSOPRG00000009225	ZNF408	99	66.104	Ochotona_princeps
ENSOCUG00000010953	ZNF408	87	79.545	ENSOGAG00000034080	ZNF408	99	79.545	Otolemur_garnettii
ENSOCUG00000010953	ZNF408	98	78.367	ENSPPAG00000034993	ZNF408	100	77.778	Pan_paniscus
ENSOCUG00000010953	ZNF408	100	76.495	ENSPPRG00000016866	ZNF408	100	76.495	Panthera_pardus
ENSOCUG00000010953	ZNF408	100	76.000	ENSPTIG00000015467	ZNF408	100	76.000	Panthera_tigris_altaica
ENSOCUG00000010953	ZNF408	98	78.510	ENSPTRG00000003551	ZNF408	100	77.917	Pan_troglodytes
ENSOCUG00000010953	ZNF408	78	71.300	ENSPEMG00000016757	Zfp408	99	71.480	Peromyscus_maniculatus_bairdii
ENSOCUG00000010953	ZNF408	84	42.623	ENSPFOG00000001760	-	99	45.673	Poecilia_formosa
ENSOCUG00000010953	ZNF408	84	44.545	ENSPLAG00000019895	-	99	44.545	Poecilia_latipinna
ENSOCUG00000010953	ZNF408	57	46.585	ENSPMEG00000021147	-	90	43.232	Poecilia_mexicana
ENSOCUG00000010953	ZNF408	83	39.331	ENSPREG00000017068	-	84	39.314	Poecilia_reticulata
ENSOCUG00000010953	ZNF408	98	77.221	ENSPPYG00000003318	ZNF408	100	78.702	Pongo_abelii
ENSOCUG00000010953	ZNF408	100	71.627	ENSPCAG00000014001	ZNF408	100	71.944	Procavia_capensis
ENSOCUG00000010953	ZNF408	98	79.113	ENSPCOG00000028698	ZNF408	100	78.472	Propithecus_coquereli
ENSOCUG00000010953	ZNF408	98	75.676	ENSPVAG00000015791	ZNF408	100	74.724	Pteropus_vampyrus
ENSOCUG00000010953	ZNF408	98	76.504	ENSSBOG00000033023	ZNF408	100	76.667	Saimiri_boliviensis_boliviensis
ENSOCUG00000010953	ZNF408	100	74.171	ENSSSCG00000023097	ZNF408	97	74.171	Sus_scrofa
ENSOCUG00000010953	ZNF408	75	91.304	ENSTBEG00000004260	ZNF408	83	91.304	Tupaia_belangeri
ENSOCUG00000010953	ZNF408	100	75.586	ENSUAMG00000026154	ZNF408	100	75.586	Ursus_americanus
ENSOCUG00000010953	ZNF408	100	75.310	ENSUMAG00000014405	ZNF408	100	75.310	Ursus_maritimus
ENSOCUG00000010953	ZNF408	100	75.583	ENSVVUG00000026805	ZNF408	97	75.583	Vulpes_vulpes
ENSOCUG00000010953	ZNF408	52	55.673	ENSXETG00000001980	znf408	100	54.617	Xenopus_tropicalis
ENSOCUG00000010953	ZNF408	64	44.731	ENSXCOG00000002869	-	89	44.301	Xiphophorus_couchianus
ENSOCUG00000010953	ZNF408	52	48.787	ENSXMAG00000018347	-	86	43.709	Xiphophorus_maculatus