EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000011083 (Gene tree)
Gene ID: 100343097
Gene Symbol: CNOT6
Alias: -
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 31299 bases
Position: chrGL018730:1963527-1994825
Accession: 14099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000009537	Exo_endo_phos	PF03372.23	8.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000011084	CNOT6-201	3925	-	ENSOCUP00000009537	558 (aa)	-	G1T0K9

Gene Model

Click here to download ENSOCUG00000011083's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000011083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000011083	CNOT6	100	76.923	ENSOCUG00000002497	CNOT6L	99	77.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000011083	CNOT6	100	96.243	ENSG00000113300	CNOT6	100	100.000	Homo_sapiens
ENSOCUG00000011083	CNOT6	100	85.740	ENSAPOG00000009994	cnot6b	100	85.740	Acanthochromis_polyacanthus
ENSOCUG00000011083	CNOT6	100	97.317	ENSAMEG00000000949	CNOT6	99	97.317	Ailuropoda_melanoleuca
ENSOCUG00000011083	CNOT6	100	84.848	ENSACIG00000016566	cnot6b	100	84.848	Amphilophus_citrinellus
ENSOCUG00000011083	CNOT6	100	85.740	ENSAOCG00000006893	cnot6b	100	85.740	Amphiprion_ocellaris
ENSOCUG00000011083	CNOT6	100	85.740	ENSAPEG00000016949	cnot6b	100	85.740	Amphiprion_percula
ENSOCUG00000011083	CNOT6	100	84.314	ENSATEG00000007862	cnot6b	100	84.314	Anabas_testudineus
ENSOCUG00000011083	CNOT6	100	95.349	ENSAPLG00000012715	CNOT6	99	95.349	Anas_platyrhynchos
ENSOCUG00000011083	CNOT6	100	92.487	ENSACAG00000016548	CNOT6	100	92.487	Anolis_carolinensis
ENSOCUG00000011083	CNOT6	100	96.601	ENSANAG00000030436	CNOT6	96	96.601	Aotus_nancymaae
ENSOCUG00000011083	CNOT6	100	83.779	ENSACLG00000008279	cnot6b	100	84.670	Astatotilapia_calliptera
ENSOCUG00000011083	CNOT6	100	85.357	ENSAMXG00000019140	cnot6a	100	85.357	Astyanax_mexicanus
ENSOCUG00000011083	CNOT6	100	84.107	ENSAMXG00000034694	cnot6b	100	84.107	Astyanax_mexicanus
ENSOCUG00000011083	CNOT6	100	96.601	ENSBTAG00000017362	CNOT6	100	96.601	Bos_taurus
ENSOCUG00000011083	CNOT6	100	96.422	ENSCJAG00000009795	CNOT6	100	96.422	Callithrix_jacchus
ENSOCUG00000011083	CNOT6	100	96.959	ENSCAFG00000000464	CNOT6	100	96.959	Canis_familiaris
ENSOCUG00000011083	CNOT6	100	96.959	ENSCAFG00020002441	CNOT6	100	96.959	Canis_lupus_dingo
ENSOCUG00000011083	CNOT6	100	96.601	ENSCHIG00000019100	CNOT6	100	96.601	Capra_hircus
ENSOCUG00000011083	CNOT6	100	94.812	ENSTSYG00000003982	CNOT6	100	94.812	Carlito_syrichta
ENSOCUG00000011083	CNOT6	100	91.055	ENSCPOG00000035657	CNOT6	100	91.055	Cavia_porcellus
ENSOCUG00000011083	CNOT6	100	92.487	ENSCCAG00000033670	CNOT6	100	92.487	Cebus_capucinus
ENSOCUG00000011083	CNOT6	100	96.243	ENSCATG00000042014	CNOT6	100	96.243	Cercocebus_atys
ENSOCUG00000011083	CNOT6	100	94.812	ENSCLAG00000010489	CNOT6	100	94.812	Chinchilla_lanigera
ENSOCUG00000011083	CNOT6	100	96.243	ENSCSAG00000008165	CNOT6	100	96.243	Chlorocebus_sabaeus
ENSOCUG00000011083	CNOT6	100	95.170	ENSCHOG00000009680	CNOT6	100	95.170	Choloepus_hoffmanni
ENSOCUG00000011083	CNOT6	100	94.275	ENSCPBG00000008908	CNOT6	100	94.275	Chrysemys_picta_bellii
ENSOCUG00000011083	CNOT6	100	96.422	ENSCANG00000026756	CNOT6	100	96.422	Colobus_angolensis_palliatus
ENSOCUG00000011083	CNOT6	100	94.275	ENSCGRG00001011452	Cnot6	100	94.275	Cricetulus_griseus_chok1gshd
ENSOCUG00000011083	CNOT6	100	92.665	ENSCGRG00000010407	Cnot6	100	92.665	Cricetulus_griseus_crigri
ENSOCUG00000011083	CNOT6	100	85.205	ENSCSEG00000010939	cnot6b	100	85.205	Cynoglossus_semilaevis
ENSOCUG00000011083	CNOT6	100	84.464	ENSCVAG00000010538	cnot6b	100	84.464	Cyprinodon_variegatus
ENSOCUG00000011083	CNOT6	100	84.107	ENSDARG00000008255	cnot6a	100	85.179	Danio_rerio
ENSOCUG00000011083	CNOT6	100	83.036	ENSDARG00000101072	cnot6b	100	83.036	Danio_rerio
ENSOCUG00000011083	CNOT6	100	96.243	ENSDNOG00000041644	CNOT6	100	96.243	Dasypus_novemcinctus
ENSOCUG00000011083	CNOT6	100	85.510	ENSDORG00000001708	Cnot6	100	85.510	Dipodomys_ordii
ENSOCUG00000011083	CNOT6	100	77.362	ENSETEG00000006975	CNOT6	100	77.362	Echinops_telfairi
ENSOCUG00000011083	CNOT6	100	96.064	ENSEASG00005012794	-	100	96.064	Equus_asinus_asinus
ENSOCUG00000011083	CNOT6	90	90.438	ENSEASG00005012957	-	99	90.438	Equus_asinus_asinus
ENSOCUG00000011083	CNOT6	100	90.161	ENSECAG00000012704	-	99	90.161	Equus_caballus
ENSOCUG00000011083	CNOT6	100	96.780	ENSECAG00000019325	CNOT6	100	96.780	Equus_caballus
ENSOCUG00000011083	CNOT6	100	95.707	ENSEEUG00000015382	CNOT6	100	95.707	Erinaceus_europaeus
ENSOCUG00000011083	CNOT6	100	81.607	ENSELUG00000024580	cnot6a	100	81.607	Esox_lucius
ENSOCUG00000011083	CNOT6	100	82.425	ENSELUG00000015981	cnot6b	99	82.425	Esox_lucius
ENSOCUG00000011083	CNOT6	100	96.959	ENSFCAG00000001881	CNOT6	100	96.959	Felis_catus
ENSOCUG00000011083	CNOT6	100	95.528	ENSFALG00000007699	CNOT6	100	95.528	Ficedula_albicollis
ENSOCUG00000011083	CNOT6	100	94.812	ENSFDAG00000001999	CNOT6	100	94.812	Fukomys_damarensis
ENSOCUG00000011083	CNOT6	64	88.095	ENSFHEG00000013756	cnot6b	96	88.095	Fundulus_heteroclitus
ENSOCUG00000011083	CNOT6	95	84.181	ENSGMOG00000009767	cnot6b	99	84.181	Gadus_morhua
ENSOCUG00000011083	CNOT6	100	95.528	ENSGALG00000034316	CNOT6	100	95.528	Gallus_gallus
ENSOCUG00000011083	CNOT6	100	84.643	ENSGAFG00000008525	cnot6b	100	84.643	Gambusia_affinis
ENSOCUG00000011083	CNOT6	95	82.109	ENSGACG00000018046	cnot6b	99	82.109	Gasterosteus_aculeatus
ENSOCUG00000011083	CNOT6	100	78.354	ENSGAGG00000012176	CNOT6	100	78.354	Gopherus_agassizii
ENSOCUG00000011083	CNOT6	100	96.243	ENSGGOG00000003675	CNOT6	100	96.243	Gorilla_gorilla
ENSOCUG00000011083	CNOT6	100	83.957	ENSHBUG00000002819	cnot6b	100	84.848	Haplochromis_burtoni
ENSOCUG00000011083	CNOT6	100	94.991	ENSHGLG00000017756	CNOT6	100	94.991	Heterocephalus_glaber_female
ENSOCUG00000011083	CNOT6	100	94.991	ENSHGLG00100005747	CNOT6	100	94.991	Heterocephalus_glaber_male
ENSOCUG00000011083	CNOT6	100	82.709	ENSHCOG00000016176	cnot6b	100	83.601	Hippocampus_comes
ENSOCUG00000011083	CNOT6	100	84.464	ENSIPUG00000019831	cnot6a	100	84.464	Ictalurus_punctatus
ENSOCUG00000011083	CNOT6	100	83.571	ENSIPUG00000017482	cnot6b	100	83.571	Ictalurus_punctatus
ENSOCUG00000011083	CNOT6	100	96.780	ENSSTOG00000002803	CNOT6	100	96.780	Ictidomys_tridecemlineatus
ENSOCUG00000011083	CNOT6	100	94.812	ENSJJAG00000012296	Cnot6	100	94.812	Jaculus_jaculus
ENSOCUG00000011083	CNOT6	100	85.357	ENSKMAG00000004640	cnot6b	100	85.357	Kryptolebias_marmoratus
ENSOCUG00000011083	CNOT6	100	83.066	ENSLBEG00000027917	cnot6b	100	83.957	Labrus_bergylta
ENSOCUG00000011083	CNOT6	100	87.679	ENSLOCG00000010102	cnot6b	99	88.929	Lepisosteus_oculatus
ENSOCUG00000011083	CNOT6	100	96.780	ENSLAFG00000016742	CNOT6	100	96.780	Loxodonta_africana
ENSOCUG00000011083	CNOT6	100	96.243	ENSMFAG00000030867	CNOT6	100	96.243	Macaca_fascicularis
ENSOCUG00000011083	CNOT6	100	96.243	ENSMMUG00000018690	CNOT6	100	96.243	Macaca_mulatta
ENSOCUG00000011083	CNOT6	100	96.243	ENSMNEG00000038565	CNOT6	100	96.243	Macaca_nemestrina
ENSOCUG00000011083	CNOT6	100	96.243	ENSMLEG00000010555	CNOT6	100	96.243	Mandrillus_leucophaeus
ENSOCUG00000011083	CNOT6	100	85.918	ENSMAMG00000007515	cnot6b	100	85.918	Mastacembelus_armatus
ENSOCUG00000011083	CNOT6	100	83.779	ENSMZEG00005012899	cnot6b	100	84.670	Maylandia_zebra
ENSOCUG00000011083	CNOT6	100	95.349	ENSMAUG00000019798	Cnot6	100	95.349	Mesocricetus_auratus
ENSOCUG00000011083	CNOT6	98	86.081	ENSMICG00000028378	-	99	86.081	Microcebus_murinus
ENSOCUG00000011083	CNOT6	100	95.170	ENSMICG00000013018	-	100	95.170	Microcebus_murinus
ENSOCUG00000011083	CNOT6	100	95.170	ENSMOCG00000021662	Cnot6	100	95.170	Microtus_ochrogaster
ENSOCUG00000011083	CNOT6	100	83.036	ENSMMOG00000003227	cnot6b	100	83.036	Mola_mola
ENSOCUG00000011083	CNOT6	100	95.349	ENSMODG00000003979	CNOT6	100	95.349	Monodelphis_domestica
ENSOCUG00000011083	CNOT6	100	85.561	ENSMALG00000014251	cnot6b	100	85.561	Monopterus_albus
ENSOCUG00000011083	CNOT6	100	95.349	MGP_CAROLIEiJ_G0016277	Cnot6	100	95.349	Mus_caroli
ENSOCUG00000011083	CNOT6	100	95.349	ENSMUSG00000020362	Cnot6	100	95.349	Mus_musculus
ENSOCUG00000011083	CNOT6	100	95.349	MGP_PahariEiJ_G0017413	Cnot6	100	95.349	Mus_pahari
ENSOCUG00000011083	CNOT6	100	95.170	MGP_SPRETEiJ_G0017122	Cnot6	100	95.170	Mus_spretus
ENSOCUG00000011083	CNOT6	100	96.780	ENSMPUG00000000587	CNOT6	96	96.780	Mustela_putorius_furo
ENSOCUG00000011083	CNOT6	100	95.196	ENSMLUG00000010257	CNOT6	100	95.196	Myotis_lucifugus
ENSOCUG00000011083	CNOT6	100	94.275	ENSNGAG00000008269	Cnot6	100	94.275	Nannospalax_galili
ENSOCUG00000011083	CNOT6	100	83.957	ENSNBRG00000010798	cnot6b	100	84.848	Neolamprologus_brichardi
ENSOCUG00000011083	CNOT6	100	95.528	ENSNLEG00000002322	CNOT6	100	95.528	Nomascus_leucogenys
ENSOCUG00000011083	CNOT6	81	95.794	ENSMEUG00000000025	CNOT6	81	95.794	Notamacropus_eugenii
ENSOCUG00000011083	CNOT6	88	95.962	ENSOPRG00000008244	-	88	95.962	Ochotona_princeps
ENSOCUG00000011083	CNOT6	100	94.097	ENSODEG00000007041	CNOT6	100	94.097	Octodon_degus
ENSOCUG00000011083	CNOT6	75	83.765	ENSONIG00000013027	cnot6b	99	83.765	Oreochromis_niloticus
ENSOCUG00000011083	CNOT6	100	94.097	ENSOANG00000010226	CNOT6	100	94.097	Ornithorhynchus_anatinus
ENSOCUG00000011083	CNOT6	100	84.314	ENSORLG00000005059	cnot6b	100	84.314	Oryzias_latipes
ENSOCUG00000011083	CNOT6	100	84.314	ENSORLG00020012784	cnot6b	100	84.314	Oryzias_latipes_hni
ENSOCUG00000011083	CNOT6	94	83.429	ENSORLG00015022658	cnot6b	98	83.429	Oryzias_latipes_hsok
ENSOCUG00000011083	CNOT6	100	84.492	ENSOMEG00000005295	cnot6b	100	84.492	Oryzias_melastigma
ENSOCUG00000011083	CNOT6	94	96.947	ENSOGAG00000032470	CNOT6	100	96.947	Otolemur_garnettii
ENSOCUG00000011083	CNOT6	97	96.863	ENSOARG00000001003	CNOT6	100	96.863	Ovis_aries
ENSOCUG00000011083	CNOT6	100	96.243	ENSPPAG00000032253	CNOT6	100	96.243	Pan_paniscus
ENSOCUG00000011083	CNOT6	100	96.780	ENSPPRG00000011912	CNOT6	100	96.780	Panthera_pardus
ENSOCUG00000011083	CNOT6	100	96.780	ENSPTIG00000016794	CNOT6	100	96.780	Panthera_tigris_altaica
ENSOCUG00000011083	CNOT6	100	96.243	ENSPTRG00000017636	CNOT6	100	96.243	Pan_troglodytes
ENSOCUG00000011083	CNOT6	100	96.243	ENSPANG00000016191	CNOT6	100	96.243	Papio_anubis
ENSOCUG00000011083	CNOT6	100	85.893	ENSPKIG00000021368	cnot6b	100	85.893	Paramormyrops_kingsleyae
ENSOCUG00000011083	CNOT6	98	94.689	ENSPSIG00000017307	CNOT6	100	94.689	Pelodiscus_sinensis
ENSOCUG00000011083	CNOT6	100	84.670	ENSPMGG00000011238	cnot6b	100	84.670	Periophthalmus_magnuspinnatus
ENSOCUG00000011083	CNOT6	100	94.097	ENSPEMG00000000627	Cnot6	100	94.097	Peromyscus_maniculatus_bairdii
ENSOCUG00000011083	CNOT6	100	94.812	ENSPCIG00000020319	CNOT6	99	94.812	Phascolarctos_cinereus
ENSOCUG00000011083	CNOT6	100	84.464	ENSPFOG00000006291	cnot6b	100	84.464	Poecilia_formosa
ENSOCUG00000011083	CNOT6	100	81.250	ENSPLAG00000008266	cnot6b	100	81.250	Poecilia_latipinna
ENSOCUG00000011083	CNOT6	100	84.643	ENSPMEG00000009091	cnot6b	100	84.643	Poecilia_mexicana
ENSOCUG00000011083	CNOT6	100	83.750	ENSPREG00000003713	cnot6b	100	83.750	Poecilia_reticulata
ENSOCUG00000011083	CNOT6	100	96.243	ENSPPYG00000016137	CNOT6	100	96.243	Pongo_abelii
ENSOCUG00000011083	CNOT6	59	100.000	ENSPCAG00000005599	-	59	100.000	Procavia_capensis
ENSOCUG00000011083	CNOT6	100	90.877	ENSPCOG00000017359	CNOT6	100	91.592	Propithecus_coquereli
ENSOCUG00000011083	CNOT6	100	91.771	ENSPVAG00000003069	CNOT6	100	91.771	Pteropus_vampyrus
ENSOCUG00000011083	CNOT6	100	83.601	ENSPNYG00000000321	cnot6b	100	84.492	Pundamilia_nyererei
ENSOCUG00000011083	CNOT6	100	85.536	ENSPNAG00000029586	cnot6a	100	85.536	Pygocentrus_nattereri
ENSOCUG00000011083	CNOT6	100	84.286	ENSPNAG00000028816	cnot6b	100	84.286	Pygocentrus_nattereri
ENSOCUG00000011083	CNOT6	100	94.275	ENSRNOG00000054891	Cnot6	100	94.275	Rattus_norvegicus
ENSOCUG00000011083	CNOT6	100	96.064	ENSRBIG00000004309	CNOT6	100	96.064	Rhinopithecus_bieti
ENSOCUG00000011083	CNOT6	100	96.064	ENSRROG00000035378	CNOT6	100	96.064	Rhinopithecus_roxellana
ENSOCUG00000011083	CNOT6	100	96.422	ENSSBOG00000030494	CNOT6	100	96.422	Saimiri_boliviensis_boliviensis
ENSOCUG00000011083	CNOT6	100	95.170	ENSSHAG00000017436	CNOT6	100	95.170	Sarcophilus_harrisii
ENSOCUG00000011083	CNOT6	100	85.536	ENSSFOG00015022383	cnot6a	96	85.536	Scleropages_formosus
ENSOCUG00000011083	CNOT6	100	87.143	ENSSFOG00015015133	CNOT6	100	87.679	Scleropages_formosus
ENSOCUG00000011083	CNOT6	100	83.601	ENSSMAG00000003084	cnot6b	100	83.601	Scophthalmus_maximus
ENSOCUG00000011083	CNOT6	100	85.383	ENSSDUG00000004151	cnot6b	100	85.383	Seriola_dumerili
ENSOCUG00000011083	CNOT6	100	84.670	ENSSLDG00000004448	cnot6b	100	85.561	Seriola_lalandi_dorsalis
ENSOCUG00000011083	CNOT6	64	75.419	ENSSARG00000012650	-	100	75.419	Sorex_araneus
ENSOCUG00000011083	CNOT6	100	93.918	ENSSPUG00000007893	CNOT6	100	93.918	Sphenodon_punctatus
ENSOCUG00000011083	CNOT6	100	85.561	ENSSPAG00000000149	cnot6b	100	85.561	Stegastes_partitus
ENSOCUG00000011083	CNOT6	100	96.422	ENSSSCG00000014009	CNOT6	100	96.422	Sus_scrofa
ENSOCUG00000011083	CNOT6	100	95.170	ENSTGUG00000001119	CNOT6	100	95.170	Taeniopygia_guttata
ENSOCUG00000011083	CNOT6	100	83.005	ENSTRUG00000002818	cnot6b	100	83.005	Takifugu_rubripes
ENSOCUG00000011083	CNOT6	100	83.363	ENSTNIG00000004443	cnot6b	99	83.363	Tetraodon_nigroviridis
ENSOCUG00000011083	CNOT6	77	86.567	ENSTBEG00000017094	-	87	86.567	Tupaia_belangeri
ENSOCUG00000011083	CNOT6	100	96.601	ENSTTRG00000009363	CNOT6	100	96.601	Tursiops_truncatus
ENSOCUG00000011083	CNOT6	77	96.970	ENSUAMG00000004579	CNOT6	88	96.970	Ursus_americanus
ENSOCUG00000011083	CNOT6	100	92.491	ENSUMAG00000024577	CNOT6	100	92.491	Ursus_maritimus
ENSOCUG00000011083	CNOT6	83	94.860	ENSVPAG00000003593	CNOT6	83	94.860	Vicugna_pacos
ENSOCUG00000011083	CNOT6	100	96.959	ENSVVUG00000026940	CNOT6	100	96.959	Vulpes_vulpes
ENSOCUG00000011083	CNOT6	100	81.607	ENSXCOG00000003360	cnot6b	100	81.607	Xiphophorus_couchianus
ENSOCUG00000011083	CNOT6	100	84.643	ENSXMAG00000008730	cnot6b	100	84.643	Xiphophorus_maculatus