EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000011704 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tRNA selenocysteine 1-associated protein 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 1012 bases
Position: chr14:50550340-50551351
Accession: 100338668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000018577	RRM_1	PF00076.22	4.3e-27	1	2
ENSOCUP00000018577	RRM_1	PF00076.22	4.3e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000011704	-	864	XM_002716317	ENSOCUP00000018577	287 (aa)	XP_002716363	G1TNK2

Gene Model

Click here to download ENSOCUG00000011704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000011704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000011704	-	89	76.172	ENSOCUG00000006834	-	100	74.219
ENSOCUG00000011704	-	60	31.792	ENSOCUG00000003783	TIAL1	67	31.609
ENSOCUG00000011704	-	100	76.736	ENSOCUG00000002353	-	100	76.736

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000011704	-	100	97.909	ENSG00000180098	TRNAU1AP	100	97.909	Homo_sapiens
ENSOCUG00000011704	-	98	57.096	ENSAPOG00000007148	TRNAU1AP	98	57.096	Acanthochromis_polyacanthus
ENSOCUG00000011704	-	100	96.864	ENSAMEG00000011367	TRNAU1AP	100	96.864	Ailuropoda_melanoleuca
ENSOCUG00000011704	-	91	68.966	ENSACIG00000004161	trnau1apa	98	58.249	Amphilophus_citrinellus
ENSOCUG00000011704	-	98	57.096	ENSAOCG00000008056	trnau1apa	98	57.096	Amphiprion_ocellaris
ENSOCUG00000011704	-	98	57.096	ENSAPEG00000008868	trnau1apa	98	57.239	Amphiprion_percula
ENSOCUG00000011704	-	96	58.389	ENSATEG00000012140	trnau1apa	98	54.984	Anabas_testudineus
ENSOCUG00000011704	-	94	91.481	ENSAPLG00000002606	TRNAU1AP	99	91.481	Anas_platyrhynchos
ENSOCUG00000011704	-	99	74.825	ENSACAG00000003995	-	99	74.825	Anolis_carolinensis
ENSOCUG00000011704	-	76	47.032	ENSACAG00000004205	-	83	47.032	Anolis_carolinensis
ENSOCUG00000011704	-	100	97.909	ENSANAG00000018976	TRNAU1AP	100	97.909	Aotus_nancymaae
ENSOCUG00000011704	-	98	57.667	ENSACLG00000018515	trnau1apa	98	59.060	Astatotilapia_calliptera
ENSOCUG00000011704	-	95	56.318	ENSAMXG00000013750	trnau1apa	90	56.318	Astyanax_mexicanus
ENSOCUG00000011704	-	95	64.444	ENSAMXG00000029240	-	98	64.444	Astyanax_mexicanus
ENSOCUG00000011704	-	100	97.561	ENSBTAG00000010393	TRNAU1AP	100	97.561	Bos_taurus
ENSOCUG00000011704	-	100	97.909	ENSCJAG00000009717	TRNAU1AP	100	97.909	Callithrix_jacchus
ENSOCUG00000011704	-	100	97.561	ENSCAFG00000011735	TRNAU1AP	100	97.561	Canis_familiaris
ENSOCUG00000011704	-	100	97.561	ENSCAFG00020023584	TRNAU1AP	100	97.561	Canis_lupus_dingo
ENSOCUG00000011704	-	100	97.213	ENSCHIG00000023215	TRNAU1AP	100	97.213	Capra_hircus
ENSOCUG00000011704	-	100	97.561	ENSTSYG00000003506	TRNAU1AP	100	97.561	Carlito_syrichta
ENSOCUG00000011704	-	100	97.213	ENSCPOG00000001925	TRNAU1AP	100	97.213	Cavia_porcellus
ENSOCUG00000011704	-	100	97.909	ENSCCAG00000037506	TRNAU1AP	100	97.909	Cebus_capucinus
ENSOCUG00000011704	-	100	97.561	ENSCATG00000044617	TRNAU1AP	100	97.561	Cercocebus_atys
ENSOCUG00000011704	-	100	96.516	ENSCLAG00000008223	TRNAU1AP	100	96.516	Chinchilla_lanigera
ENSOCUG00000011704	-	100	97.561	ENSCSAG00000001014	TRNAU1AP	100	97.561	Chlorocebus_sabaeus
ENSOCUG00000011704	-	95	93.431	ENSCPBG00000000121	TRNAU1AP	100	93.431	Chrysemys_picta_bellii
ENSOCUG00000011704	-	59	50.877	ENSCSAVG00000011781	-	90	50.877	Ciona_savignyi
ENSOCUG00000011704	-	100	86.063	ENSCANG00000041949	TRNAU1AP	100	98.870	Colobus_angolensis_palliatus
ENSOCUG00000011704	-	100	97.213	ENSCGRG00001004713	Trnau1ap	100	97.213	Cricetulus_griseus_chok1gshd
ENSOCUG00000011704	-	100	97.213	ENSCGRG00000014532	Trnau1ap	100	97.213	Cricetulus_griseus_crigri
ENSOCUG00000011704	-	98	57.000	ENSCSEG00000006663	trnau1apa	95	55.629	Cynoglossus_semilaevis
ENSOCUG00000011704	-	97	56.463	ENSCVAG00000018069	trnau1apa	94	57.875	Cyprinodon_variegatus
ENSOCUG00000011704	-	95	51.601	ENSDARG00000101323	trnau1apa	88	50.890	Danio_rerio
ENSOCUG00000011704	-	67	75.000	ENSDNOG00000047959	-	97	75.401	Dasypus_novemcinctus
ENSOCUG00000011704	-	100	97.561	ENSDNOG00000033009	TRNAU1AP	100	97.561	Dasypus_novemcinctus
ENSOCUG00000011704	-	99	89.510	ENSDORG00000006349	Trnau1ap	100	97.403	Dipodomys_ordii
ENSOCUG00000011704	-	96	37.423	FBgn0031607	CG15440	51	50.867	Drosophila_melanogaster
ENSOCUG00000011704	-	85	92.245	ENSETEG00000012594	TRNAU1AP	100	92.245	Echinops_telfairi
ENSOCUG00000011704	-	55	58.242	ENSEBUG00000006349	-	60	58.242	Eptatretus_burgeri
ENSOCUG00000011704	-	100	97.909	ENSEASG00005010062	TRNAU1AP	100	97.909	Equus_asinus_asinus
ENSOCUG00000011704	-	100	97.909	ENSECAG00000012980	TRNAU1AP	100	97.909	Equus_caballus
ENSOCUG00000011704	-	96	61.672	ENSELUG00000017686	trnau1apa	94	61.324	Esox_lucius
ENSOCUG00000011704	-	96	69.474	ENSELUG00000022790	-	96	64.773	Esox_lucius
ENSOCUG00000011704	-	100	97.909	ENSFCAG00000013401	TRNAU1AP	100	97.909	Felis_catus
ENSOCUG00000011704	-	95	91.606	ENSFALG00000001371	TRNAU1AP	100	91.606	Ficedula_albicollis
ENSOCUG00000011704	-	100	96.516	ENSFDAG00000018599	TRNAU1AP	100	96.516	Fukomys_damarensis
ENSOCUG00000011704	-	79	59.184	ENSFHEG00000018232	trnau1apa	86	55.212	Fundulus_heteroclitus
ENSOCUG00000011704	-	95	52.797	ENSGMOG00000016508	trnau1apa	93	53.873	Gadus_morhua
ENSOCUG00000011704	-	68	48.357	ENSGALG00000012721	C2H6orf52	95	44.015	Gallus_gallus
ENSOCUG00000011704	-	100	91.986	ENSGALG00000001310	-	100	91.986	Gallus_gallus
ENSOCUG00000011704	-	78	56.723	ENSGAFG00000004928	trnau1apa	90	57.563	Gambusia_affinis
ENSOCUG00000011704	-	98	58.904	ENSGACG00000001443	trnau1apa	95	58.562	Gasterosteus_aculeatus
ENSOCUG00000011704	-	95	93.796	ENSGAGG00000004940	TRNAU1AP	100	93.796	Gopherus_agassizii
ENSOCUG00000011704	-	100	97.909	ENSGGOG00000003511	TRNAU1AP	100	97.909	Gorilla_gorilla
ENSOCUG00000011704	-	98	56.721	ENSHBUG00000002510	trnau1apa	98	57.516	Haplochromis_burtoni
ENSOCUG00000011704	-	100	96.516	ENSHGLG00000010380	TRNAU1AP	100	96.516	Heterocephalus_glaber_female
ENSOCUG00000011704	-	100	94.077	ENSHGLG00100012699	TRNAU1AP	100	94.077	Heterocephalus_glaber_male
ENSOCUG00000011704	-	99	55.776	ENSHCOG00000014770	trnau1apa	97	53.896	Hippocampus_comes
ENSOCUG00000011704	-	100	97.909	ENSSTOG00000000079	TRNAU1AP	100	97.909	Ictidomys_tridecemlineatus
ENSOCUG00000011704	-	100	96.864	ENSJJAG00000010128	Trnau1ap	100	96.864	Jaculus_jaculus
ENSOCUG00000011704	-	95	58.824	ENSKMAG00000001230	trnau1apa	93	57.093	Kryptolebias_marmoratus
ENSOCUG00000011704	-	95	59.386	ENSLBEG00000011683	trnau1apa	93	58.503	Labrus_bergylta
ENSOCUG00000011704	-	99	71.228	ENSLACG00000005541	TRNAU1AP	99	71.228	Latimeria_chalumnae
ENSOCUG00000011704	-	99	70.629	ENSLOCG00000004041	trnau1apa	99	69.580	Lepisosteus_oculatus
ENSOCUG00000011704	-	100	97.561	ENSLAFG00000007628	TRNAU1AP	100	97.561	Loxodonta_africana
ENSOCUG00000011704	-	100	97.561	ENSMFAG00000043751	TRNAU1AP	100	97.561	Macaca_fascicularis
ENSOCUG00000011704	-	100	97.561	ENSMMUG00000006561	TRNAU1AP	100	97.561	Macaca_mulatta
ENSOCUG00000011704	-	100	97.561	ENSMNEG00000044201	TRNAU1AP	100	97.561	Macaca_nemestrina
ENSOCUG00000011704	-	100	97.561	ENSMLEG00000015649	TRNAU1AP	100	97.561	Mandrillus_leucophaeus
ENSOCUG00000011704	-	98	57.655	ENSMAMG00000001247	trnau1apa	98	57.439	Mastacembelus_armatus
ENSOCUG00000011704	-	98	57.667	ENSMZEG00005017722	trnau1apa	98	59.060	Maylandia_zebra
ENSOCUG00000011704	-	97	92.446	ENSMGAG00000002105	TRNAU1AP	100	92.446	Meleagris_gallopavo
ENSOCUG00000011704	-	100	97.561	ENSMICG00000008386	TRNAU1AP	100	98.305	Microcebus_murinus
ENSOCUG00000011704	-	100	96.864	ENSMOCG00000011189	Trnau1ap	100	96.864	Microtus_ochrogaster
ENSOCUG00000011704	-	95	56.985	ENSMMOG00000012107	trnau1apa	92	56.985	Mola_mola
ENSOCUG00000011704	-	100	93.380	ENSMODG00000010927	TRNAU1AP	100	93.380	Monodelphis_domestica
ENSOCUG00000011704	-	96	59.727	ENSMALG00000016778	trnau1apa	94	56.997	Monopterus_albus
ENSOCUG00000011704	-	100	96.864	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	97.826	Mus_caroli
ENSOCUG00000011704	-	100	96.864	ENSMUSG00000028898	Trnau1ap	100	97.826	Mus_musculus
ENSOCUG00000011704	-	100	97.213	MGP_PahariEiJ_G0028896	Trnau1ap	100	97.826	Mus_pahari
ENSOCUG00000011704	-	100	96.516	MGP_SPRETEiJ_G0027544	Trnau1ap	100	97.826	Mus_spretus
ENSOCUG00000011704	-	100	97.213	ENSMPUG00000015511	TRNAU1AP	100	97.213	Mustela_putorius_furo
ENSOCUG00000011704	-	100	97.561	ENSMLUG00000012586	TRNAU1AP	100	97.561	Myotis_lucifugus
ENSOCUG00000011704	-	100	95.819	ENSNGAG00000015881	Trnau1ap	100	95.819	Nannospalax_galili
ENSOCUG00000011704	-	99	55.973	ENSNBRG00000001758	trnau1apa	98	55.973	Neolamprologus_brichardi
ENSOCUG00000011704	-	100	97.909	ENSNLEG00000009822	TRNAU1AP	100	97.909	Nomascus_leucogenys
ENSOCUG00000011704	-	97	92.086	ENSMEUG00000006117	TRNAU1AP	100	92.086	Notamacropus_eugenii
ENSOCUG00000011704	-	70	97.273	ENSOPRG00000007084	-	69	97.273	Ochotona_princeps
ENSOCUG00000011704	-	100	96.864	ENSODEG00000002970	TRNAU1AP	100	96.864	Octodon_degus
ENSOCUG00000011704	-	80	58.025	ENSONIG00000004715	trnau1apa	95	58.264	Oreochromis_niloticus
ENSOCUG00000011704	-	99	73.427	ENSOANG00000005325	-	99	73.427	Ornithorhynchus_anatinus
ENSOCUG00000011704	-	98	57.447	ENSORLG00000010428	trnau1apa	95	55.634	Oryzias_latipes
ENSOCUG00000011704	-	98	56.655	ENSORLG00020000926	trnau1ap	95	55.479	Oryzias_latipes_hni
ENSOCUG00000011704	-	98	56.655	ENSORLG00015009858	trnau1ap	95	55.479	Oryzias_latipes_hsok
ENSOCUG00000011704	-	98	57.679	ENSOMEG00000007873	trnau1apa	95	54.795	Oryzias_melastigma
ENSOCUG00000011704	-	100	97.561	ENSOGAG00000002274	TRNAU1AP	100	97.561	Otolemur_garnettii
ENSOCUG00000011704	-	100	97.213	ENSOARG00000002843	TRNAU1AP	100	97.213	Ovis_aries
ENSOCUG00000011704	-	100	97.909	ENSPPAG00000033927	TRNAU1AP	100	97.909	Pan_paniscus
ENSOCUG00000011704	-	100	97.909	ENSPPRG00000004416	TRNAU1AP	100	97.909	Panthera_pardus
ENSOCUG00000011704	-	100	97.909	ENSPTIG00000016677	TRNAU1AP	100	97.909	Panthera_tigris_altaica
ENSOCUG00000011704	-	93	79.336	ENSPTRG00000000434	-	97	77.860	Pan_troglodytes
ENSOCUG00000011704	-	100	97.561	ENSPANG00000016019	TRNAU1AP	100	97.561	Papio_anubis
ENSOCUG00000011704	-	94	73.404	ENSPKIG00000022205	-	93	76.404	Paramormyrops_kingsleyae
ENSOCUG00000011704	-	95	59.011	ENSPKIG00000015511	trnau1apa	92	57.244	Paramormyrops_kingsleyae
ENSOCUG00000011704	-	95	93.066	ENSPSIG00000006864	TRNAU1AP	100	93.066	Pelodiscus_sinensis
ENSOCUG00000011704	-	94	60.294	ENSPMGG00000023893	trnau1apa	91	59.041	Periophthalmus_magnuspinnatus
ENSOCUG00000011704	-	100	96.864	ENSPEMG00000007877	Trnau1ap	100	96.864	Peromyscus_maniculatus_bairdii
ENSOCUG00000011704	-	78	60.538	ENSPMAG00000005934	trnau1apa	96	59.722	Petromyzon_marinus
ENSOCUG00000011704	-	60	59.091	ENSPMAG00000000592	trnau1apa	97	59.091	Petromyzon_marinus
ENSOCUG00000011704	-	95	55.556	ENSPFOG00000008100	trnau1apa	93	56.250	Poecilia_formosa
ENSOCUG00000011704	-	91	55.235	ENSPLAG00000010236	trnau1apa	93	55.957	Poecilia_latipinna
ENSOCUG00000011704	-	96	54.483	ENSPMEG00000016387	trnau1apa	92	55.172	Poecilia_mexicana
ENSOCUG00000011704	-	89	61.798	ENSPREG00000019821	trnau1apa	86	63.095	Poecilia_reticulata
ENSOCUG00000011704	-	100	76.655	ENSPPYG00000001639	-	100	84.884	Pongo_abelii
ENSOCUG00000011704	-	100	97.561	ENSPCOG00000027712	-	100	98.305	Propithecus_coquereli
ENSOCUG00000011704	-	98	80.783	ENSPCOG00000023470	-	100	80.783	Propithecus_coquereli
ENSOCUG00000011704	-	100	97.909	ENSPVAG00000017214	TRNAU1AP	100	97.909	Pteropus_vampyrus
ENSOCUG00000011704	-	98	56.721	ENSPNYG00000010130	trnau1apa	98	57.516	Pundamilia_nyererei
ENSOCUG00000011704	-	95	53.125	ENSPNAG00000024905	trnau1apa	91	53.237	Pygocentrus_nattereri
ENSOCUG00000011704	-	94	88.561	ENSRNOG00000055344	Trnau1ap	92	88.561	Rattus_norvegicus
ENSOCUG00000011704	-	100	97.909	ENSRBIG00000029083	TRNAU1AP	100	97.909	Rhinopithecus_bieti
ENSOCUG00000011704	-	100	97.909	ENSRROG00000029128	TRNAU1AP	100	97.909	Rhinopithecus_roxellana
ENSOCUG00000011704	-	100	97.909	ENSSBOG00000021299	TRNAU1AP	100	97.909	Saimiri_boliviensis_boliviensis
ENSOCUG00000011704	-	100	92.683	ENSSHAG00000008108	TRNAU1AP	100	92.683	Sarcophilus_harrisii
ENSOCUG00000011704	-	98	54.754	ENSSMAG00000020851	trnau1apa	98	55.738	Scophthalmus_maximus
ENSOCUG00000011704	-	96	57.483	ENSSDUG00000011734	trnau1apa	94	56.122	Seriola_dumerili
ENSOCUG00000011704	-	96	48.727	ENSSLDG00000012101	trnau1apa	92	49.104	Seriola_lalandi_dorsalis
ENSOCUG00000011704	-	97	96.403	ENSSARG00000007536	TRNAU1AP	100	96.403	Sorex_araneus
ENSOCUG00000011704	-	99	84.965	ENSSPUG00000010400	-	100	84.965	Sphenodon_punctatus
ENSOCUG00000011704	-	61	81.818	ENSSPUG00000010415	-	100	81.818	Sphenodon_punctatus
ENSOCUG00000011704	-	98	57.377	ENSSPAG00000005029	trnau1apa	98	56.678	Stegastes_partitus
ENSOCUG00000011704	-	100	97.909	ENSSSCG00000030284	TRNAU1AP	100	98.870	Sus_scrofa
ENSOCUG00000011704	-	68	52.041	ENSTGUG00000005908	-	100	52.041	Taeniopygia_guttata
ENSOCUG00000011704	-	97	92.086	ENSTGUG00000000735	-	100	92.086	Taeniopygia_guttata
ENSOCUG00000011704	-	98	57.807	ENSTRUG00000003352	trnau1apa	98	57.143	Takifugu_rubripes
ENSOCUG00000011704	-	95	57.840	ENSTNIG00000006129	trnau1apa	98	55.776	Tetraodon_nigroviridis
ENSOCUG00000011704	-	85	86.531	ENSTBEG00000008049	-	100	86.531	Tupaia_belangeri
ENSOCUG00000011704	-	100	97.561	ENSTTRG00000001854	TRNAU1AP	100	97.561	Tursiops_truncatus
ENSOCUG00000011704	-	95	97.445	ENSUAMG00000008789	TRNAU1AP	100	97.445	Ursus_americanus
ENSOCUG00000011704	-	100	97.213	ENSUMAG00000011068	TRNAU1AP	100	97.740	Ursus_maritimus
ENSOCUG00000011704	-	100	86.986	ENSVPAG00000006778	TRNAU1AP	100	86.986	Vicugna_pacos
ENSOCUG00000011704	-	99	95.775	ENSVVUG00000012518	TRNAU1AP	93	95.775	Vulpes_vulpes
ENSOCUG00000011704	-	95	54.514	ENSXMAG00000017361	trnau1apa	93	56.250	Xiphophorus_maculatus