EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000011713 (Gene tree)
Gene ID: 100342084
Gene Symbol: GTF3A
Alias: -
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 18276 bases
Position: chrGL018735:479235-497510
Accession: 4662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000010070	zf-C2H2	PF00096.26	2.3e-33	1	6
ENSOCUP00000010070	zf-C2H2	PF00096.26	2.3e-33	2	6
ENSOCUP00000010070	zf-C2H2	PF00096.26	2.3e-33	3	6
ENSOCUP00000010070	zf-C2H2	PF00096.26	2.3e-33	4	6
ENSOCUP00000010070	zf-C2H2	PF00096.26	2.3e-33	5	6
ENSOCUP00000010070	zf-C2H2	PF00096.26	2.3e-33	6	6
ENSOCUP00000010070	zf-met	PF12874.7	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000011714	GTF3A-201	1614	-	ENSOCUP00000010070	430 (aa)	-	G1T1T9

Gene Model

Click here to download ENSOCUG00000011713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000011713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000011713	GTF3A	60	34.872	ENSOCUG00000029223	ZNF699	75	34.872
ENSOCUG00000011713	GTF3A	61	35.632	ENSOCUG00000029071	ZNF81	59	35.632
ENSOCUG00000011713	GTF3A	72	31.343	ENSOCUG00000029755	-	88	31.818
ENSOCUG00000011713	GTF3A	67	33.178	ENSOCUG00000013454	PRDM5	77	33.178
ENSOCUG00000011713	GTF3A	74	40.141	ENSOCUG00000017842	ZNF235	65	40.141
ENSOCUG00000011713	GTF3A	62	31.559	ENSOCUG00000005876	-	99	31.559
ENSOCUG00000011713	GTF3A	61	38.824	ENSOCUG00000003561	ZNF2	65	38.824
ENSOCUG00000011713	GTF3A	62	37.069	ENSOCUG00000001924	ZFP1	62	33.906
ENSOCUG00000011713	GTF3A	73	32.000	ENSOCUG00000029075	ZNF582	67	32.000
ENSOCUG00000011713	GTF3A	72	35.789	ENSOCUG00000029594	-	88	35.789
ENSOCUG00000011713	GTF3A	61	32.414	ENSOCUG00000007715	-	78	32.414
ENSOCUG00000011713	GTF3A	60	36.585	ENSOCUG00000029445	-	97	36.179
ENSOCUG00000011713	GTF3A	66	33.205	ENSOCUG00000029276	-	75	33.208
ENSOCUG00000011713	GTF3A	66	37.165	ENSOCUG00000027634	-	66	37.165
ENSOCUG00000011713	GTF3A	61	40.659	ENSOCUG00000023005	ZNF367	53	40.659
ENSOCUG00000011713	GTF3A	62	34.328	ENSOCUG00000029391	ZNF668	82	34.328
ENSOCUG00000011713	GTF3A	63	33.171	ENSOCUG00000015340	-	89	40.351
ENSOCUG00000011713	GTF3A	67	34.314	ENSOCUG00000029133	ZNF768	56	32.463

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000011713	GTF3A	82	83.380	ENSAMEG00000015824	GTF3A	99	83.934	Ailuropoda_melanoleuca
ENSOCUG00000011713	GTF3A	81	81.638	ENSBTAG00000012600	GTF3A	99	81.638	Bos_taurus
ENSOCUG00000011713	GTF3A	82	83.520	ENSCAFG00000006794	GTF3A	99	83.520	Canis_familiaris
ENSOCUG00000011713	GTF3A	81	81.073	ENSCHIG00000010341	-	99	81.073	Capra_hircus
ENSOCUG00000011713	GTF3A	81	80.618	ENSCHIG00000021040	-	84	80.618	Capra_hircus
ENSOCUG00000011713	GTF3A	75	81.763	ENSTSYG00000004206	GTF3A	98	82.371	Carlito_syrichta
ENSOCUG00000011713	GTF3A	71	82.418	ENSCAPG00000015862	GTF3A	99	81.641	Cavia_aperea
ENSOCUG00000011713	GTF3A	75	81.098	ENSCPOG00000010143	GTF3A	99	81.402	Cavia_porcellus
ENSOCUG00000011713	GTF3A	71	84.026	ENSCLAG00000003912	GTF3A	95	84.345	Chinchilla_lanigera
ENSOCUG00000011713	GTF3A	88	78.205	ENSDNOG00000037405	-	88	81.183	Dasypus_novemcinctus
ENSOCUG00000011713	GTF3A	82	77.778	ENSETEG00000003225	GTF3A	76	79.032	Echinops_telfairi
ENSOCUG00000011713	GTF3A	83	82.418	ENSEASG00005022495	-	81	83.516	Equus_asinus_asinus
ENSOCUG00000011713	GTF3A	77	73.294	ENSEASG00005013216	-	91	73.294	Equus_asinus_asinus
ENSOCUG00000011713	GTF3A	75	80.615	ENSECAG00000024825	-	78	78.994	Equus_caballus
ENSOCUG00000011713	GTF3A	83	82.967	ENSECAG00000014803	GTF3A	86	84.459	Equus_caballus
ENSOCUG00000011713	GTF3A	88	74.010	ENSEEUG00000004307	GTF3A	89	81.044	Erinaceus_europaeus
ENSOCUG00000011713	GTF3A	85	82.306	ENSFCAG00000006982	GTF3A	86	82.842	Felis_catus
ENSOCUG00000011713	GTF3A	76	84.244	ENSFDAG00000016841	GTF3A	96	84.244	Fukomys_damarensis
ENSOCUG00000011713	GTF3A	71	85.209	ENSHGLG00000004173	GTF3A	97	85.209	Heterocephalus_glaber_female
ENSOCUG00000011713	GTF3A	71	85.209	ENSHGLG00100011561	GTF3A	97	85.209	Heterocephalus_glaber_male
ENSOCUG00000011713	GTF3A	71	83.067	ENSSTOG00000013853	GTF3A	100	83.067	Ictidomys_tridecemlineatus
ENSOCUG00000011713	GTF3A	76	78.317	ENSJJAG00000011501	Gtf3a	99	78.317	Jaculus_jaculus
ENSOCUG00000011713	GTF3A	82	77.446	ENSLAFG00000027315	GTF3A	99	77.446	Loxodonta_africana
ENSOCUG00000011713	GTF3A	77	81.065	ENSMAUG00000016253	Gtf3a	92	81.065	Mesocricetus_auratus
ENSOCUG00000011713	GTF3A	83	82.065	ENSMICG00000014763	GTF3A	99	82.065	Microcebus_murinus
ENSOCUG00000011713	GTF3A	77	81.250	MGP_CAROLIEiJ_G0028031	Gtf3a	99	77.348	Mus_caroli
ENSOCUG00000011713	GTF3A	77	81.250	ENSMUSG00000016503	Gtf3a	99	76.860	Mus_musculus
ENSOCUG00000011713	GTF3A	76	82.090	MGP_PahariEiJ_G0024597	Gtf3a	99	77.961	Mus_pahari
ENSOCUG00000011713	GTF3A	83	76.860	MGP_SPRETEiJ_G0029029	Gtf3a	99	76.860	Mus_spretus
ENSOCUG00000011713	GTF3A	83	84.298	ENSMPUG00000005835	GTF3A	98	84.848	Mustela_putorius_furo
ENSOCUG00000011713	GTF3A	76	85.498	ENSMLUG00000002158	GTF3A	100	86.103	Myotis_lucifugus
ENSOCUG00000011713	GTF3A	82	83.747	ENSNLEG00000000331	GTF3A	99	83.747	Nomascus_leucogenys
ENSOCUG00000011713	GTF3A	75	59.877	ENSMEUG00000010089	GTF3A	99	58.929	Notamacropus_eugenii
ENSOCUG00000011713	GTF3A	82	78.771	ENSOPRG00000000854	-	90	78.771	Ochotona_princeps
ENSOCUG00000011713	GTF3A	83	80.163	ENSODEG00000006725	GTF3A	87	80.163	Octodon_degus
ENSOCUG00000011713	GTF3A	82	82.418	ENSOGAG00000014589	GTF3A	99	82.967	Otolemur_garnettii
ENSOCUG00000011713	GTF3A	81	75.843	ENSOARG00000012551	GTF3A	98	75.843	Ovis_aries
ENSOCUG00000011713	GTF3A	82	84.488	ENSPPRG00000002368	GTF3A	99	84.488	Panthera_pardus
ENSOCUG00000011713	GTF3A	75	84.797	ENSPTIG00000018958	GTF3A	81	84.797	Panthera_tigris_altaica
ENSOCUG00000011713	GTF3A	75	53.053	ENSPSIG00000011722	GTF3A	99	53.053	Pelodiscus_sinensis
ENSOCUG00000011713	GTF3A	81	84.314	ENSPPYG00000005235	GTF3A	99	84.314	Pongo_abelii
ENSOCUG00000011713	GTF3A	84	81.217	ENSPCOG00000016742	GTF3A	85	82.540	Propithecus_coquereli
ENSOCUG00000011713	GTF3A	89	76.154	ENSPVAG00000012837	GTF3A	87	79.508	Pteropus_vampyrus
ENSOCUG00000011713	GTF3A	82	76.860	ENSRROG00000043264	GTF3A	99	76.860	Rhinopithecus_roxellana
ENSOCUG00000011713	GTF3A	75	78.704	ENSSHAG00000016965	GTF3A	99	74.857	Sarcophilus_harrisii
ENSOCUG00000011713	GTF3A	72	74.441	ENSSARG00000010692	GTF3A	86	74.441	Sorex_araneus
ENSOCUG00000011713	GTF3A	75	69.632	ENSSPUG00000005307	GTF3A	88	69.091	Sphenodon_punctatus
ENSOCUG00000011713	GTF3A	68	44.710	ENSTRUG00000005241	gtf3ab	89	44.805	Takifugu_rubripes
ENSOCUG00000011713	GTF3A	67	86.719	ENSTBEG00000012075	GTF3A	61	86.719	Tupaia_belangeri
ENSOCUG00000011713	GTF3A	91	72.457	ENSTTRG00000008538	GTF3A	89	76.087	Tursiops_truncatus
ENSOCUG00000011713	GTF3A	82	85.873	ENSUAMG00000019189	GTF3A	99	85.873	Ursus_americanus
ENSOCUG00000011713	GTF3A	76	84.685	ENSUMAG00000016941	GTF3A	100	84.718	Ursus_maritimus
ENSOCUG00000011713	GTF3A	76	81.695	ENSVPAG00000004995	GTF3A	99	82.373	Vicugna_pacos
ENSOCUG00000011713	GTF3A	82	83.333	ENSVVUG00000009197	GTF3A	99	83.333	Vulpes_vulpes