EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000011824 (Gene tree)
Gene ID: 100354362
Gene Symbol: RIOK1
Alias: -
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 25384 bases
Position: chr12:1145497-1170880
Accession: 100354362
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000026598	RIO1	PF01163.22	2e-77	1	1
ENSOCUP00000010168	RIO1	PF01163.22	4.1e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000033552	RIOK1-202	1785	-	ENSOCUP00000026598	575 (aa)	-	U3KMY9
ENSOCUT00000011829	RIOK1-201	1707	XM_002714161	ENSOCUP00000010168	568 (aa)	XP_002714207	G1T225

Gene Model

Click here to download ENSOCUG00000011824's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000011824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000011824	RIOK1	63	39.529	ENSOCUG00000016820	RIOK3	59	44.409

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000011824	RIOK1	100	88.049	ENSG00000124784	RIOK1	100	88.049	Homo_sapiens
ENSOCUG00000011824	RIOK1	57	66.049	ENSAPOG00000015632	riok1	99	66.049	Acanthochromis_polyacanthus
ENSOCUG00000011824	RIOK1	100	84.710	ENSAMEG00000017367	RIOK1	100	84.710	Ailuropoda_melanoleuca
ENSOCUG00000011824	RIOK1	88	69.940	ENSACIG00000003735	riok1	86	70.722	Amphilophus_citrinellus
ENSOCUG00000011824	RIOK1	99	65.426	ENSAOCG00000011818	riok1	100	65.088	Amphiprion_ocellaris
ENSOCUG00000011824	RIOK1	99	64.894	ENSAPEG00000001345	riok1	100	64.623	Amphiprion_percula
ENSOCUG00000011824	RIOK1	82	70.842	ENSATEG00000006594	riok1	90	78.740	Anabas_testudineus
ENSOCUG00000011824	RIOK1	84	80.544	ENSAPLG00000004196	RIOK1	100	81.933	Anas_platyrhynchos
ENSOCUG00000011824	RIOK1	100	74.609	ENSACAG00000000695	RIOK1	100	75.306	Anolis_carolinensis
ENSOCUG00000011824	RIOK1	100	75.923	ENSANAG00000023777	RIOK1	100	75.923	Aotus_nancymaae
ENSOCUG00000011824	RIOK1	98	65.079	ENSACLG00000015799	riok1	99	65.295	Astatotilapia_calliptera
ENSOCUG00000011824	RIOK1	99	66.212	ENSAMXG00000015286	riok1	99	65.529	Astyanax_mexicanus
ENSOCUG00000011824	RIOK1	100	84.710	ENSBTAG00000013821	RIOK1	100	84.710	Bos_taurus
ENSOCUG00000011824	RIOK1	72	50.122	WBGene00019698	riok-1	77	48.837	Caenorhabditis_elegans
ENSOCUG00000011824	RIOK1	100	85.589	ENSCJAG00000042960	RIOK1	100	85.589	Callithrix_jacchus
ENSOCUG00000011824	RIOK1	100	85.062	ENSCAFG00000009563	RIOK1	100	85.764	Canis_familiaris
ENSOCUG00000011824	RIOK1	94	85.178	ENSCAFG00020013233	RIOK1	98	84.799	Canis_lupus_dingo
ENSOCUG00000011824	RIOK1	100	84.359	ENSCHIG00000001534	RIOK1	100	84.359	Capra_hircus
ENSOCUG00000011824	RIOK1	66	88.859	ENSTSYG00000011368	RIOK1	100	91.437	Carlito_syrichta
ENSOCUG00000011824	RIOK1	79	87.778	ENSCAPG00000008489	RIOK1	100	87.500	Cavia_aperea
ENSOCUG00000011824	RIOK1	98	82.734	ENSCPOG00000009882	RIOK1	100	83.684	Cavia_porcellus
ENSOCUG00000011824	RIOK1	100	86.116	ENSCCAG00000024061	RIOK1	100	86.116	Cebus_capucinus
ENSOCUG00000011824	RIOK1	100	86.292	ENSCATG00000001548	RIOK1	100	86.292	Cercocebus_atys
ENSOCUG00000011824	RIOK1	100	85.764	ENSCLAG00000003522	RIOK1	100	85.764	Chinchilla_lanigera
ENSOCUG00000011824	RIOK1	94	85.366	ENSCSAG00000007396	RIOK1	99	84.815	Chlorocebus_sabaeus
ENSOCUG00000011824	RIOK1	85	74.295	ENSCHOG00000001873	RIOK1	85	74.295	Choloepus_hoffmanni
ENSOCUG00000011824	RIOK1	94	74.307	ENSCPBG00000008685	RIOK1	92	74.954	Chrysemys_picta_bellii
ENSOCUG00000011824	RIOK1	100	85.764	ENSCANG00000032919	RIOK1	100	85.764	Colobus_angolensis_palliatus
ENSOCUG00000011824	RIOK1	100	78.383	ENSCGRG00001018868	Riok1	100	78.032	Cricetulus_griseus_chok1gshd
ENSOCUG00000011824	RIOK1	100	78.383	ENSCGRG00000008015	Riok1	100	78.032	Cricetulus_griseus_crigri
ENSOCUG00000011824	RIOK1	88	49.503	ENSCSEG00000015014	riok1	77	75.000	Cynoglossus_semilaevis
ENSOCUG00000011824	RIOK1	57	63.804	ENSCVAG00000011291	riok1	99	62.270	Cyprinodon_variegatus
ENSOCUG00000011824	RIOK1	99	67.018	ENSDARG00000016399	riok1	100	69.081	Danio_rerio
ENSOCUG00000011824	RIOK1	100	84.119	ENSDNOG00000015813	RIOK1	100	84.293	Dasypus_novemcinctus
ENSOCUG00000011824	RIOK1	100	85.639	ENSDORG00000008530	Riok1	100	86.140	Dipodomys_ordii
ENSOCUG00000011824	RIOK1	77	52.339	FBgn0036187	RIOK1	83	50.100	Drosophila_melanogaster
ENSOCUG00000011824	RIOK1	100	83.128	ENSETEG00000020273	RIOK1	100	82.953	Echinops_telfairi
ENSOCUG00000011824	RIOK1	99	62.367	ENSEBUG00000013672	riok1	99	57.951	Eptatretus_burgeri
ENSOCUG00000011824	RIOK1	95	83.700	ENSEASG00005012032	RIOK1	96	83.700	Equus_asinus_asinus
ENSOCUG00000011824	RIOK1	100	85.062	ENSECAG00000009007	RIOK1	100	85.062	Equus_caballus
ENSOCUG00000011824	RIOK1	77	74.773	ENSEEUG00000007123	RIOK1	100	74.773	Erinaceus_europaeus
ENSOCUG00000011824	RIOK1	99	66.316	ENSELUG00000017029	riok1	99	67.082	Esox_lucius
ENSOCUG00000011824	RIOK1	100	83.217	ENSFCAG00000027290	RIOK1	100	83.741	Felis_catus
ENSOCUG00000011824	RIOK1	100	75.923	ENSFALG00000013244	RIOK1	100	77.018	Ficedula_albicollis
ENSOCUG00000011824	RIOK1	100	85.764	ENSFDAG00000019139	RIOK1	100	85.764	Fukomys_damarensis
ENSOCUG00000011824	RIOK1	80	68.571	ENSFHEG00000021419	riok1	98	68.352	Fundulus_heteroclitus
ENSOCUG00000011824	RIOK1	73	69.492	ENSGMOG00000018668	riok1	92	71.756	Gadus_morhua
ENSOCUG00000011824	RIOK1	58	74.775	ENSGALG00000012795	RIOK1	100	77.606	Gallus_gallus
ENSOCUG00000011824	RIOK1	91	58.301	ENSGAFG00000004091	riok1	79	60.879	Gambusia_affinis
ENSOCUG00000011824	RIOK1	97	61.360	ENSGACG00000002496	riok1	94	68.889	Gasterosteus_aculeatus
ENSOCUG00000011824	RIOK1	82	76.110	ENSGAGG00000002262	RIOK1	98	76.956	Gopherus_agassizii
ENSOCUG00000011824	RIOK1	100	72.583	ENSGGOG00000011037	RIOK1	100	72.583	Gorilla_gorilla
ENSOCUG00000011824	RIOK1	100	82.601	ENSHGLG00000008699	RIOK1	100	82.601	Heterocephalus_glaber_female
ENSOCUG00000011824	RIOK1	100	82.953	ENSHGLG00100008188	RIOK1	100	82.953	Heterocephalus_glaber_male
ENSOCUG00000011824	RIOK1	88	69.048	ENSHCOG00000013275	riok1	88	70.686	Hippocampus_comes
ENSOCUG00000011824	RIOK1	99	68.596	ENSIPUG00000003290	riok1	84	76.082	Ictalurus_punctatus
ENSOCUG00000011824	RIOK1	100	86.643	ENSSTOG00000009289	RIOK1	100	86.643	Ictidomys_tridecemlineatus
ENSOCUG00000011824	RIOK1	100	84.534	ENSJJAG00000015152	Riok1	100	84.534	Jaculus_jaculus
ENSOCUG00000011824	RIOK1	68	75.321	ENSKMAG00000019378	riok1	99	75.321	Kryptolebias_marmoratus
ENSOCUG00000011824	RIOK1	88	69.261	ENSLBEG00000016650	riok1	84	71.843	Labrus_bergylta
ENSOCUG00000011824	RIOK1	100	65.794	ENSLACG00000000300	RIOK1	100	64.444	Latimeria_chalumnae
ENSOCUG00000011824	RIOK1	99	69.136	ENSLOCG00000011728	riok1	99	71.099	Lepisosteus_oculatus
ENSOCUG00000011824	RIOK1	100	83.713	ENSLAFG00000005504	RIOK1	100	83.837	Loxodonta_africana
ENSOCUG00000011824	RIOK1	100	85.764	ENSMFAG00000029990	RIOK1	100	85.764	Macaca_fascicularis
ENSOCUG00000011824	RIOK1	100	85.589	ENSMMUG00000015577	RIOK1	100	85.589	Macaca_mulatta
ENSOCUG00000011824	RIOK1	100	82.601	ENSMNEG00000034396	RIOK1	99	84.731	Macaca_nemestrina
ENSOCUG00000011824	RIOK1	100	86.467	ENSMLEG00000026327	RIOK1	100	86.467	Mandrillus_leucophaeus
ENSOCUG00000011824	RIOK1	98	65.530	ENSMAMG00000019557	riok1	99	66.429	Mastacembelus_armatus
ENSOCUG00000011824	RIOK1	98	64.851	ENSMZEG00005019482	riok1	99	66.370	Maylandia_zebra
ENSOCUG00000011824	RIOK1	100	73.427	ENSMGAG00000003816	RIOK1	100	73.252	Meleagris_gallopavo
ENSOCUG00000011824	RIOK1	100	79.789	ENSMAUG00000012751	Riok1	100	79.789	Mesocricetus_auratus
ENSOCUG00000011824	RIOK1	100	86.995	ENSMICG00000044301	RIOK1	84	86.995	Microcebus_murinus
ENSOCUG00000011824	RIOK1	100	78.207	ENSMOCG00000017032	Riok1	100	77.504	Microtus_ochrogaster
ENSOCUG00000011824	RIOK1	82	62.500	ENSMMOG00000020598	riok1	85	62.903	Mola_mola
ENSOCUG00000011824	RIOK1	100	75.475	ENSMODG00000009964	RIOK1	100	77.544	Monodelphis_domestica
ENSOCUG00000011824	RIOK1	84	64.151	ENSMALG00000019982	riok1	81	71.722	Monopterus_albus
ENSOCUG00000011824	RIOK1	99	78.826	MGP_CAROLIEiJ_G0018439	Riok1	100	77.680	Mus_caroli
ENSOCUG00000011824	RIOK1	99	77.975	ENSMUSG00000021428	Riok1	100	77.018	Mus_musculus
ENSOCUG00000011824	RIOK1	99	78.114	MGP_PahariEiJ_G0019507	Riok1	99	77.580	Mus_pahari
ENSOCUG00000011824	RIOK1	99	78.292	MGP_SPRETEiJ_G0019319	Riok1	100	77.329	Mus_spretus
ENSOCUG00000011824	RIOK1	100	83.042	ENSMPUG00000000570	RIOK1	100	83.392	Mustela_putorius_furo
ENSOCUG00000011824	RIOK1	100	85.237	ENSMLUG00000015312	RIOK1	100	85.237	Myotis_lucifugus
ENSOCUG00000011824	RIOK1	100	86.116	ENSNGAG00000021734	Riok1	100	86.116	Nannospalax_galili
ENSOCUG00000011824	RIOK1	70	78.086	ENSNBRG00000017489	riok1	91	67.623	Neolamprologus_brichardi
ENSOCUG00000011824	RIOK1	100	78.559	ENSNLEG00000011621	RIOK1	100	78.559	Nomascus_leucogenys
ENSOCUG00000011824	RIOK1	84	52.521	ENSMEUG00000006679	-	84	53.571	Notamacropus_eugenii
ENSOCUG00000011824	RIOK1	65	85.984	ENSOPRG00000009524	RIOK1	100	85.984	Ochotona_princeps
ENSOCUG00000011824	RIOK1	71	74.378	ENSODEG00000005663	RIOK1	100	74.378	Octodon_degus
ENSOCUG00000011824	RIOK1	98	66.308	ENSONIG00000014010	riok1	98	65.889	Oreochromis_niloticus
ENSOCUG00000011824	RIOK1	82	85.560	ENSOANG00000012553	RIOK1	100	85.560	Ornithorhynchus_anatinus
ENSOCUG00000011824	RIOK1	98	66.726	ENSORLG00000008221	riok1	99	66.667	Oryzias_latipes
ENSOCUG00000011824	RIOK1	98	64.811	ENSORLG00020013838	riok1	70	65.054	Oryzias_latipes_hni
ENSOCUG00000011824	RIOK1	98	66.726	ENSORLG00015009817	riok1	98	66.964	Oryzias_latipes_hsok
ENSOCUG00000011824	RIOK1	98	65.709	ENSOMEG00000002758	riok1	88	66.248	Oryzias_melastigma
ENSOCUG00000011824	RIOK1	100	75.571	ENSOGAG00000010192	RIOK1	100	75.571	Otolemur_garnettii
ENSOCUG00000011824	RIOK1	100	85.062	ENSOARG00000017747	RIOK1	100	85.062	Ovis_aries
ENSOCUG00000011824	RIOK1	100	78.383	ENSPPAG00000016349	RIOK1	100	87.462	Pan_paniscus
ENSOCUG00000011824	RIOK1	100	83.042	ENSPPRG00000001932	RIOK1	100	83.741	Panthera_pardus
ENSOCUG00000011824	RIOK1	100	83.217	ENSPTIG00000018545	RIOK1	100	83.916	Panthera_tigris_altaica
ENSOCUG00000011824	RIOK1	100	87.873	ENSPTRG00000017700	RIOK1	100	87.873	Pan_troglodytes
ENSOCUG00000011824	RIOK1	100	86.292	ENSPANG00000016522	RIOK1	100	86.292	Papio_anubis
ENSOCUG00000011824	RIOK1	85	74.636	ENSPKIG00000006442	riok1	100	66.783	Paramormyrops_kingsleyae
ENSOCUG00000011824	RIOK1	100	76.098	ENSPSIG00000006488	RIOK1	99	75.952	Pelodiscus_sinensis
ENSOCUG00000011824	RIOK1	70	72.040	ENSPMGG00000017807	riok1	96	68.611	Periophthalmus_magnuspinnatus
ENSOCUG00000011824	RIOK1	100	79.262	ENSPEMG00000017844	Riok1	100	79.262	Peromyscus_maniculatus_bairdii
ENSOCUG00000011824	RIOK1	70	70.244	ENSPMAG00000006351	riok1	97	70.244	Petromyzon_marinus
ENSOCUG00000011824	RIOK1	97	74.194	ENSPCIG00000012653	RIOK1	97	73.524	Phascolarctos_cinereus
ENSOCUG00000011824	RIOK1	98	62.837	ENSPFOG00000011532	riok1	87	67.775	Poecilia_formosa
ENSOCUG00000011824	RIOK1	98	63.016	ENSPLAG00000001341	riok1	99	62.837	Poecilia_latipinna
ENSOCUG00000011824	RIOK1	98	62.657	ENSPMEG00000007710	riok1	99	62.478	Poecilia_mexicana
ENSOCUG00000011824	RIOK1	98	62.837	ENSPREG00000009237	riok1	99	60.854	Poecilia_reticulata
ENSOCUG00000011824	RIOK1	100	86.819	ENSPPYG00000016207	RIOK1	100	86.819	Pongo_abelii
ENSOCUG00000011824	RIOK1	100	72.583	ENSPCAG00000007892	RIOK1	100	72.583	Procavia_capensis
ENSOCUG00000011824	RIOK1	100	85.289	ENSPVAG00000014091	RIOK1	100	85.814	Pteropus_vampyrus
ENSOCUG00000011824	RIOK1	58	68.502	ENSPNYG00000004465	riok1	100	68.807	Pundamilia_nyererei
ENSOCUG00000011824	RIOK1	99	68.375	ENSPNAG00000015435	riok1	99	68.254	Pygocentrus_nattereri
ENSOCUG00000011824	RIOK1	99	78.292	ENSRNOG00000014049	Riok1	100	85.991	Rattus_norvegicus
ENSOCUG00000011824	RIOK1	100	85.589	ENSRBIG00000036685	RIOK1	100	85.589	Rhinopithecus_bieti
ENSOCUG00000011824	RIOK1	100	85.764	ENSRROG00000036611	RIOK1	100	85.764	Rhinopithecus_roxellana
ENSOCUG00000011824	RIOK1	56	40.845	YOR119C	RIO1	96	37.423	Saccharomyces_cerevisiae
ENSOCUG00000011824	RIOK1	100	88.225	ENSSBOG00000012588	RIOK1	100	88.225	Saimiri_boliviensis_boliviensis
ENSOCUG00000011824	RIOK1	85	78.189	ENSSHAG00000003091	RIOK1	93	78.099	Sarcophilus_harrisii
ENSOCUG00000011824	RIOK1	86	73.156	ENSSFOG00015001035	riok1	86	73.211	Scleropages_formosus
ENSOCUG00000011824	RIOK1	58	64.220	ENSSDUG00000007291	riok1	100	63.914	Seriola_dumerili
ENSOCUG00000011824	RIOK1	98	65.350	ENSSLDG00000017657	riok1	99	65.889	Seriola_lalandi_dorsalis
ENSOCUG00000011824	RIOK1	85	69.502	ENSSPUG00000007624	RIOK1	82	69.979	Sphenodon_punctatus
ENSOCUG00000011824	RIOK1	99	64.561	ENSSPAG00000022710	riok1	100	66.310	Stegastes_partitus
ENSOCUG00000011824	RIOK1	100	82.074	ENSSSCG00000001024	RIOK1	100	82.074	Sus_scrofa
ENSOCUG00000011824	RIOK1	100	74.439	ENSTGUG00000002331	RIOK1	100	76.532	Taeniopygia_guttata
ENSOCUG00000011824	RIOK1	52	62.416	ENSTRUG00000001575	-	100	62.416	Takifugu_rubripes
ENSOCUG00000011824	RIOK1	74	62.322	ENSTRUG00000002854	riok1	94	64.175	Takifugu_rubripes
ENSOCUG00000011824	RIOK1	99	59.545	ENSTNIG00000003078	riok1	85	65.000	Tetraodon_nigroviridis
ENSOCUG00000011824	RIOK1	100	82.074	ENSTBEG00000016730	RIOK1	100	81.722	Tupaia_belangeri
ENSOCUG00000011824	RIOK1	73	90.488	ENSTTRG00000017335	RIOK1	87	90.488	Tursiops_truncatus
ENSOCUG00000011824	RIOK1	97	81.867	ENSUAMG00000003721	RIOK1	99	81.867	Ursus_americanus
ENSOCUG00000011824	RIOK1	100	84.710	ENSUMAG00000018461	RIOK1	100	84.710	Ursus_maritimus
ENSOCUG00000011824	RIOK1	70	82.192	ENSVPAG00000010813	-	73	82.192	Vicugna_pacos
ENSOCUG00000011824	RIOK1	100	84.886	ENSVVUG00000005018	RIOK1	100	85.589	Vulpes_vulpes
ENSOCUG00000011824	RIOK1	88	73.200	ENSXETG00000020436	riok1	85	75.311	Xenopus_tropicalis
ENSOCUG00000011824	RIOK1	84	64.916	ENSXCOG00000000245	riok1	100	64.706	Xiphophorus_couchianus
ENSOCUG00000011824	RIOK1	84	67.158	ENSXMAG00000014572	riok1	82	71.529	Xiphophorus_maculatus