EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000012034 (Gene tree)
Gene ID: 100357120
Gene Symbol: RBM47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 97790 bases
Position: chr2:29641557-29739346
Accession: 100357120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000010354	RRM_1	PF00076.22	4.2e-38	1	3
ENSOCUP00000010354	RRM_1	PF00076.22	4.2e-38	2	3
ENSOCUP00000010354	RRM_1	PF00076.22	4.2e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000012033	RBM47-201	5023	XM_002709400	ENSOCUP00000010354	591 (aa)	XP_002709446	G1T2H2

Gene Model

Click here to download ENSOCUG00000012034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000012034's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000012034	RBM47	51	73.333	ENSOCUG00000017859	RBM46	56	73.333
ENSOCUG00000012034	RBM47	73	59.459	ENSOCUG00000011587	A1CF	74	59.459
ENSOCUG00000012034	RBM47	52	54.839	ENSOCUG00000000601	SYNCRIP	79	46.532
ENSOCUG00000012034	RBM47	54	54.434	ENSOCUG00000006686	HNRNPR	71	45.534

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000012034	RBM47	100	94.958	ENSG00000163694	RBM47	100	96.789	Homo_sapiens
ENSOCUG00000012034	RBM47	100	77.333	ENSAPOG00000011062	rbm47	100	79.795	Acanthochromis_polyacanthus
ENSOCUG00000012034	RBM47	100	94.137	ENSAMEG00000009672	RBM47	100	94.807	Ailuropoda_melanoleuca
ENSOCUG00000012034	RBM47	100	77.090	ENSACIG00000011531	rbm47	100	76.421	Amphilophus_citrinellus
ENSOCUG00000012034	RBM47	100	78.057	ENSAOCG00000022245	rbm47	100	79.284	Amphiprion_ocellaris
ENSOCUG00000012034	RBM47	100	78.057	ENSAPEG00000018304	rbm47	100	79.284	Amphiprion_percula
ENSOCUG00000012034	RBM47	100	77.176	ENSATEG00000018400	rbm47	100	75.246	Anabas_testudineus
ENSOCUG00000012034	RBM47	100	87.710	ENSAPLG00000013974	RBM47	100	87.542	Anas_platyrhynchos
ENSOCUG00000012034	RBM47	100	85.142	ENSACAG00000011833	RBM47	100	85.309	Anolis_carolinensis
ENSOCUG00000012034	RBM47	100	94.622	ENSANAG00000029440	RBM47	100	94.790	Aotus_nancymaae
ENSOCUG00000012034	RBM47	100	76.230	ENSACLG00000016902	rbm47	100	80.620	Astatotilapia_calliptera
ENSOCUG00000012034	RBM47	100	75.862	ENSAMXG00000021794	rbm47	100	74.877	Astyanax_mexicanus
ENSOCUG00000012034	RBM47	100	96.453	ENSBTAG00000002356	RBM47	100	96.453	Bos_taurus
ENSOCUG00000012034	RBM47	97	95.113	ENSCJAG00000019385	RBM47	100	94.463	Callithrix_jacchus
ENSOCUG00000012034	RBM47	96	95.079	ENSCAFG00000015898	RBM47	100	94.266	Canis_familiaris
ENSOCUG00000012034	RBM47	83	96.327	ENSCAFG00020010558	RBM47	94	95.588	Canis_lupus_dingo
ENSOCUG00000012034	RBM47	100	96.791	ENSCHIG00000026214	RBM47	100	96.791	Capra_hircus
ENSOCUG00000012034	RBM47	86	80.354	ENSTSYG00000033612	RBM47	93	80.550	Carlito_syrichta
ENSOCUG00000012034	RBM47	100	88.364	ENSCAPG00000008426	RBM47	100	91.892	Cavia_aperea
ENSOCUG00000012034	RBM47	100	95.953	ENSCPOG00000014100	RBM47	100	95.953	Cavia_porcellus
ENSOCUG00000012034	RBM47	100	94.755	ENSCCAG00000030129	-	100	94.799	Cebus_capucinus
ENSOCUG00000012034	RBM47	99	65.657	ENSCCAG00000024397	-	99	65.152	Cebus_capucinus
ENSOCUG00000012034	RBM47	100	95.431	ENSCATG00000042064	RBM47	100	95.431	Cercocebus_atys
ENSOCUG00000012034	RBM47	100	95.101	ENSCLAG00000001684	RBM47	100	95.608	Chinchilla_lanigera
ENSOCUG00000012034	RBM47	100	95.126	ENSCSAG00000017060	RBM47	100	95.294	Chlorocebus_sabaeus
ENSOCUG00000012034	RBM47	88	92.405	ENSCHOG00000011731	RBM47	88	92.405	Choloepus_hoffmanni
ENSOCUG00000012034	RBM47	100	90.117	ENSCPBG00000013831	RBM47	100	89.782	Chrysemys_picta_bellii
ENSOCUG00000012034	RBM47	100	95.431	ENSCANG00000019997	RBM47	100	95.431	Colobus_angolensis_palliatus
ENSOCUG00000012034	RBM47	100	63.306	ENSCGRG00001020102	-	100	68.412	Cricetulus_griseus_chok1gshd
ENSOCUG00000012034	RBM47	100	91.792	ENSCGRG00001000623	-	100	91.960	Cricetulus_griseus_chok1gshd
ENSOCUG00000012034	RBM47	100	90.955	ENSCGRG00000007762	-	100	91.824	Cricetulus_griseus_crigri
ENSOCUG00000012034	RBM47	100	62.975	ENSCGRG00000014760	-	100	68.074	Cricetulus_griseus_crigri
ENSOCUG00000012034	RBM47	100	75.251	ENSCSEG00000004545	rbm47	100	74.333	Cynoglossus_semilaevis
ENSOCUG00000012034	RBM47	100	76.303	ENSCVAG00000020144	rbm47	100	80.307	Cyprinodon_variegatus
ENSOCUG00000012034	RBM47	100	76.771	ENSDARG00000061985	rbm47	100	75.862	Danio_rerio
ENSOCUG00000012034	RBM47	100	93.412	ENSDNOG00000046854	RBM47	100	94.932	Dasypus_novemcinctus
ENSOCUG00000012034	RBM47	100	94.983	ENSDORG00000010144	Rbm47	100	95.151	Dipodomys_ordii
ENSOCUG00000012034	RBM47	100	94.305	ENSETEG00000009194	RBM47	100	94.305	Echinops_telfairi
ENSOCUG00000012034	RBM47	99	57.616	ENSEBUG00000011912	rbm47	99	57.947	Eptatretus_burgeri
ENSOCUG00000012034	RBM47	100	96.959	ENSEASG00005008443	RBM47	100	96.959	Equus_asinus_asinus
ENSOCUG00000012034	RBM47	100	96.959	ENSECAG00000004400	RBM47	100	96.959	Equus_caballus
ENSOCUG00000012034	RBM47	75	95.238	ENSEEUG00000001194	RBM47	75	95.238	Erinaceus_europaeus
ENSOCUG00000012034	RBM47	100	74.959	ENSELUG00000006148	rbm47	100	80.101	Esox_lucius
ENSOCUG00000012034	RBM47	100	96.277	ENSFCAG00000012399	RBM47	100	96.277	Felis_catus
ENSOCUG00000012034	RBM47	100	90.604	ENSFALG00000002861	RBM47	100	90.940	Ficedula_albicollis
ENSOCUG00000012034	RBM47	100	94.088	ENSFDAG00000016326	RBM47	100	93.750	Fukomys_damarensis
ENSOCUG00000012034	RBM47	100	77.181	ENSFHEG00000007938	rbm47	100	75.168	Fundulus_heteroclitus
ENSOCUG00000012034	RBM47	100	74.634	ENSGMOG00000014802	rbm47	100	73.984	Gadus_morhua
ENSOCUG00000012034	RBM47	64	90.981	ENSGALG00000014267	RBM47	99	90.981	Gallus_gallus
ENSOCUG00000012034	RBM47	64	82.447	ENSGAFG00000020571	rbm47	98	80.902	Gambusia_affinis
ENSOCUG00000012034	RBM47	100	74.304	ENSGACG00000016223	rbm47	100	78.772	Gasterosteus_aculeatus
ENSOCUG00000012034	RBM47	100	90.452	ENSGAGG00000020051	RBM47	100	90.117	Gopherus_agassizii
ENSOCUG00000012034	RBM47	100	95.431	ENSGGOG00000001367	RBM47	100	95.431	Gorilla_gorilla
ENSOCUG00000012034	RBM47	100	75.980	ENSHBUG00000003520	rbm47	100	80.620	Haplochromis_burtoni
ENSOCUG00000012034	RBM47	84	90.244	ENSHGLG00000016914	RBM47	100	93.711	Heterocephalus_glaber_female
ENSOCUG00000012034	RBM47	100	93.909	ENSHGLG00100014028	-	100	93.909	Heterocephalus_glaber_male
ENSOCUG00000012034	RBM47	100	84.772	ENSHGLG00100003071	-	100	84.602	Heterocephalus_glaber_male
ENSOCUG00000012034	RBM47	99	76.923	ENSHCOG00000002074	rbm47	99	79.337	Hippocampus_comes
ENSOCUG00000012034	RBM47	100	77.815	ENSIPUG00000004743	rbm47	100	76.807	Ictalurus_punctatus
ENSOCUG00000012034	RBM47	100	95.302	ENSSTOG00000004727	RBM47	100	95.302	Ictidomys_tridecemlineatus
ENSOCUG00000012034	RBM47	100	92.617	ENSJJAG00000013823	Rbm47	100	93.624	Jaculus_jaculus
ENSOCUG00000012034	RBM47	100	78.261	ENSKMAG00000000084	rbm47	100	78.827	Kryptolebias_marmoratus
ENSOCUG00000012034	RBM47	100	76.254	ENSLBEG00000008436	rbm47	100	77.494	Labrus_bergylta
ENSOCUG00000012034	RBM47	100	85.546	ENSLACG00000007196	RBM47	100	85.042	Latimeria_chalumnae
ENSOCUG00000012034	RBM47	100	81.849	ENSLOCG00000012966	rbm47	95	80.168	Lepisosteus_oculatus
ENSOCUG00000012034	RBM47	100	94.118	ENSLAFG00000011998	RBM47	100	94.118	Loxodonta_africana
ENSOCUG00000012034	RBM47	100	95.431	ENSMFAG00000037967	RBM47	100	95.431	Macaca_fascicularis
ENSOCUG00000012034	RBM47	100	95.126	ENSMMUG00000012036	RBM47	100	96.392	Macaca_mulatta
ENSOCUG00000012034	RBM47	100	95.262	ENSMNEG00000040774	RBM47	100	95.262	Macaca_nemestrina
ENSOCUG00000012034	RBM47	100	96.835	ENSMLEG00000041432	RBM47	100	96.835	Mandrillus_leucophaeus
ENSOCUG00000012034	RBM47	100	76.645	ENSMAMG00000019143	rbm47	100	80.155	Mastacembelus_armatus
ENSOCUG00000012034	RBM47	100	76.230	ENSMZEG00005023659	rbm47	100	75.574	Maylandia_zebra
ENSOCUG00000012034	RBM47	100	89.482	ENSMGAG00000012226	RBM47	100	89.316	Meleagris_gallopavo
ENSOCUG00000012034	RBM47	100	91.946	ENSMAUG00000006493	Rbm47	100	92.617	Mesocricetus_auratus
ENSOCUG00000012034	RBM47	100	91.371	ENSMICG00000026417	RBM47	100	91.781	Microcebus_murinus
ENSOCUG00000012034	RBM47	100	92.437	ENSMOCG00000021170	Rbm47	100	93.109	Microtus_ochrogaster
ENSOCUG00000012034	RBM47	100	77.176	ENSMMOG00000007260	rbm47	100	75.698	Mola_mola
ENSOCUG00000012034	RBM47	100	91.400	ENSMODG00000007003	RBM47	100	91.568	Monodelphis_domestica
ENSOCUG00000012034	RBM47	52	82.051	ENSMODG00000015426	-	99	78.549	Monodelphis_domestica
ENSOCUG00000012034	RBM47	100	81.895	ENSMODG00000020561	-	100	82.234	Monodelphis_domestica
ENSOCUG00000012034	RBM47	100	79.949	ENSMALG00000005167	rbm47	100	79.434	Monopterus_albus
ENSOCUG00000012034	RBM47	100	92.761	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.266	Mus_caroli
ENSOCUG00000012034	RBM47	100	93.098	ENSMUSG00000070780	Rbm47	100	93.603	Mus_musculus
ENSOCUG00000012034	RBM47	100	93.098	MGP_PahariEiJ_G0017040	Rbm47	100	93.603	Mus_pahari
ENSOCUG00000012034	RBM47	100	93.074	MGP_SPRETEiJ_G0028253	Rbm47	100	93.581	Mus_spretus
ENSOCUG00000012034	RBM47	100	95.960	ENSMPUG00000006177	RBM47	94	95.960	Mustela_putorius_furo
ENSOCUG00000012034	RBM47	100	92.917	ENSMLUG00000000889	RBM47	100	93.423	Myotis_lucifugus
ENSOCUG00000012034	RBM47	100	92.450	ENSNGAG00000003325	Rbm47	100	93.121	Nannospalax_galili
ENSOCUG00000012034	RBM47	100	76.105	ENSNBRG00000015092	rbm47	100	75.614	Neolamprologus_brichardi
ENSOCUG00000012034	RBM47	100	95.093	ENSNLEG00000017151	RBM47	100	96.011	Nomascus_leucogenys
ENSOCUG00000012034	RBM47	72	86.449	ENSMEUG00000009516	-	99	86.449	Notamacropus_eugenii
ENSOCUG00000012034	RBM47	75	96.680	ENSOPRG00000016507	-	75	96.680	Ochotona_princeps
ENSOCUG00000012034	RBM47	100	96.284	ENSODEG00000004873	RBM47	100	96.284	Octodon_degus
ENSOCUG00000012034	RBM47	96	79.304	ENSONIG00000009061	rbm47	100	74.754	Oreochromis_niloticus
ENSOCUG00000012034	RBM47	100	87.102	ENSOANG00000008978	RBM47	100	88.610	Ornithorhynchus_anatinus
ENSOCUG00000012034	RBM47	100	76.884	ENSORLG00000005847	rbm47	100	79.434	Oryzias_latipes
ENSOCUG00000012034	RBM47	100	77.052	ENSORLG00020005154	rbm47	100	79.434	Oryzias_latipes_hni
ENSOCUG00000012034	RBM47	100	77.387	ENSORLG00015000066	rbm47	100	79.692	Oryzias_latipes_hsok
ENSOCUG00000012034	RBM47	100	78.020	ENSOMEG00000010730	rbm47	100	76.510	Oryzias_melastigma
ENSOCUG00000012034	RBM47	100	87.310	ENSOGAG00000025193	-	100	87.648	Otolemur_garnettii
ENSOCUG00000012034	RBM47	100	96.128	ENSOGAG00000029367	-	100	96.128	Otolemur_garnettii
ENSOCUG00000012034	RBM47	100	87.331	ENSOARG00000012711	RBM47	100	87.669	Ovis_aries
ENSOCUG00000012034	RBM47	100	95.262	ENSPPAG00000029763	RBM47	100	95.262	Pan_paniscus
ENSOCUG00000012034	RBM47	100	92.893	ENSPPRG00000012873	RBM47	100	92.893	Panthera_pardus
ENSOCUG00000012034	RBM47	85	92.615	ENSPTIG00000017046	RBM47	100	92.415	Panthera_tigris_altaica
ENSOCUG00000012034	RBM47	100	95.431	ENSPTRG00000016006	RBM47	100	95.431	Pan_troglodytes
ENSOCUG00000012034	RBM47	100	95.431	ENSPANG00000005980	RBM47	100	95.431	Papio_anubis
ENSOCUG00000012034	RBM47	96	75.652	ENSPKIG00000013431	RBM47	98	80.829	Paramormyrops_kingsleyae
ENSOCUG00000012034	RBM47	96	77.797	ENSPKIG00000005037	rbm47	100	74.376	Paramormyrops_kingsleyae
ENSOCUG00000012034	RBM47	89	90.548	ENSPSIG00000017516	RBM47	97	90.548	Pelodiscus_sinensis
ENSOCUG00000012034	RBM47	100	75.503	ENSPMGG00000018540	rbm47	100	75.084	Periophthalmus_magnuspinnatus
ENSOCUG00000012034	RBM47	100	92.450	ENSPEMG00000011088	Rbm47	100	93.121	Peromyscus_maniculatus_bairdii
ENSOCUG00000012034	RBM47	100	76.384	ENSPFOG00000007997	rbm47	100	74.756	Poecilia_formosa
ENSOCUG00000012034	RBM47	100	82.181	ENSPLAG00000002072	rbm47	100	80.851	Poecilia_latipinna
ENSOCUG00000012034	RBM47	100	78.130	ENSPMEG00000017492	rbm47	100	79.284	Poecilia_mexicana
ENSOCUG00000012034	RBM47	100	82.181	ENSPREG00000008456	rbm47	100	80.851	Poecilia_reticulata
ENSOCUG00000012034	RBM47	97	81.633	ENSPPYG00000014688	RBM47	99	80.782	Pongo_abelii
ENSOCUG00000012034	RBM47	81	95.262	ENSPCAG00000011879	RBM47	81	95.262	Procavia_capensis
ENSOCUG00000012034	RBM47	100	92.724	ENSPCOG00000023451	RBM47	100	93.232	Propithecus_coquereli
ENSOCUG00000012034	RBM47	100	95.462	ENSPVAG00000003812	RBM47	100	95.462	Pteropus_vampyrus
ENSOCUG00000012034	RBM47	100	75.693	ENSPNYG00000022868	rbm47	100	75.204	Pundamilia_nyererei
ENSOCUG00000012034	RBM47	100	76.098	ENSPNAG00000007940	rbm47	100	76.026	Pygocentrus_nattereri
ENSOCUG00000012034	RBM47	100	93.098	ENSRNOG00000002408	Rbm47	100	93.603	Rattus_norvegicus
ENSOCUG00000012034	RBM47	100	95.601	ENSRBIG00000039601	RBM47	100	95.601	Rhinopithecus_bieti
ENSOCUG00000012034	RBM47	100	95.601	ENSRROG00000044696	RBM47	100	95.601	Rhinopithecus_roxellana
ENSOCUG00000012034	RBM47	100	91.371	ENSSBOG00000028475	RBM47	100	95.052	Saimiri_boliviensis_boliviensis
ENSOCUG00000012034	RBM47	100	92.047	ENSSHAG00000017576	RBM47	100	92.047	Sarcophilus_harrisii
ENSOCUG00000012034	RBM47	97	76.990	ENSSFOG00015024101	RBM47	97	76.471	Scleropages_formosus
ENSOCUG00000012034	RBM47	100	73.675	ENSSFOG00015012445	rbm47	100	72.637	Scleropages_formosus
ENSOCUG00000012034	RBM47	100	75.041	ENSSMAG00000009744	rbm47	100	78.149	Scophthalmus_maximus
ENSOCUG00000012034	RBM47	100	78.559	ENSSDUG00000022684	rbm47	100	76.923	Seriola_dumerili
ENSOCUG00000012034	RBM47	100	78.428	ENSSLDG00000003109	rbm47	100	78.734	Seriola_lalandi_dorsalis
ENSOCUG00000012034	RBM47	85	95.768	ENSSARG00000001735	RBM47	75	95.768	Sorex_araneus
ENSOCUG00000012034	RBM47	100	87.563	ENSSPUG00000007515	RBM47	100	88.564	Sphenodon_punctatus
ENSOCUG00000012034	RBM47	100	78.930	ENSSPAG00000001257	rbm47	100	80.051	Stegastes_partitus
ENSOCUG00000012034	RBM47	100	96.622	ENSSSCG00000008796	RBM47	100	96.622	Sus_scrofa
ENSOCUG00000012034	RBM47	100	89.748	ENSTGUG00000008705	RBM47	100	89.916	Taeniopygia_guttata
ENSOCUG00000012034	RBM47	100	76.214	ENSTRUG00000014050	rbm47	100	74.874	Takifugu_rubripes
ENSOCUG00000012034	RBM47	100	76.519	ENSTNIG00000006127	rbm47	100	75.164	Tetraodon_nigroviridis
ENSOCUG00000012034	RBM47	77	89.873	ENSTBEG00000001607	RBM47	76	90.426	Tupaia_belangeri
ENSOCUG00000012034	RBM47	100	95.946	ENSTTRG00000002839	RBM47	100	95.946	Tursiops_truncatus
ENSOCUG00000012034	RBM47	100	95.791	ENSUAMG00000021346	RBM47	100	95.791	Ursus_americanus
ENSOCUG00000012034	RBM47	57	97.340	ENSVPAG00000000641	-	57	97.340	Vicugna_pacos
ENSOCUG00000012034	RBM47	96	95.951	ENSVVUG00000014774	RBM47	100	94.932	Vulpes_vulpes
ENSOCUG00000012034	RBM47	100	86.027	ENSXETG00000012802	rbm47	100	86.027	Xenopus_tropicalis
ENSOCUG00000012034	RBM47	88	82.181	ENSXCOG00000000780	rbm47	100	80.851	Xiphophorus_couchianus
ENSOCUG00000012034	RBM47	100	77.517	ENSXMAG00000009874	rbm47	100	79.028	Xiphophorus_maculatus