EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000012394 (Gene tree)
Gene ID: 100350694
Gene Symbol: CHD6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 239797 bases
Position: chrGL018718:777095-1016891
Accession: 19057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000010683	ResIII	PF04851.15	5.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000012411	CHD6-201	8786	-	ENSOCUP00000010683	2690 (aa)	-	G1T391

Gene Model

Click here to download ENSOCUG00000012394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000012394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000012394	CHD6	58	63.630	ENSOCUG00000010822	CHD8	67	65.000
ENSOCUG00000012394	CHD6	78	64.248	ENSOCUG00000001016	CHD9	86	62.087
ENSOCUG00000012394	CHD6	73	68.857	ENSOCUG00000010034	CHD7	87	65.594

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000012394	CHD6	100	89.849	ENSG00000124177	CHD6	99	100.000	Homo_sapiens
ENSOCUG00000012394	CHD6	74	75.632	ENSAPOG00000013736	chd6	64	76.254	Acanthochromis_polyacanthus
ENSOCUG00000012394	CHD6	100	89.695	ENSAMEG00000009496	CHD6	99	89.695	Ailuropoda_melanoleuca
ENSOCUG00000012394	CHD6	74	75.733	ENSATEG00000005608	chd6	62	77.464	Anabas_testudineus
ENSOCUG00000012394	CHD6	99	70.614	ENSAPLG00000015592	CHD6	99	71.470	Anas_platyrhynchos
ENSOCUG00000012394	CHD6	94	71.958	ENSACAG00000006842	CHD6	95	72.910	Anolis_carolinensis
ENSOCUG00000012394	CHD6	100	89.665	ENSANAG00000037548	CHD6	99	93.578	Aotus_nancymaae
ENSOCUG00000012394	CHD6	76	73.360	ENSAMXG00000009576	chd6	77	69.375	Astyanax_mexicanus
ENSOCUG00000012394	CHD6	100	86.544	ENSBTAG00000005733	CHD6	99	86.544	Bos_taurus
ENSOCUG00000012394	CHD6	100	89.776	ENSCJAG00000017920	CHD6	99	93.394	Callithrix_jacchus
ENSOCUG00000012394	CHD6	100	89.474	ENSCAFG00000009236	CHD6	99	89.474	Canis_familiaris
ENSOCUG00000012394	CHD6	99	88.737	ENSCAFG00020012906	CHD6	99	97.116	Canis_lupus_dingo
ENSOCUG00000012394	CHD6	100	86.507	ENSCHIG00000017606	CHD6	99	86.507	Capra_hircus
ENSOCUG00000012394	CHD6	84	89.001	ENSTSYG00000014635	CHD6	100	89.001	Carlito_syrichta
ENSOCUG00000012394	CHD6	100	88.922	ENSCPOG00000015641	CHD6	99	88.922	Cavia_porcellus
ENSOCUG00000012394	CHD6	100	89.849	ENSCCAG00000036828	CHD6	99	93.578	Cebus_capucinus
ENSOCUG00000012394	CHD6	100	89.629	ENSCATG00000039248	CHD6	99	93.578	Cercocebus_atys
ENSOCUG00000012394	CHD6	100	88.836	ENSCLAG00000013743	CHD6	99	88.836	Chinchilla_lanigera
ENSOCUG00000012394	CHD6	100	89.849	ENSCSAG00000013997	CHD6	99	89.849	Chlorocebus_sabaeus
ENSOCUG00000012394	CHD6	92	89.578	ENSCHOG00000012647	CHD6	95	89.578	Choloepus_hoffmanni
ENSOCUG00000012394	CHD6	99	71.455	ENSCPBG00000019382	CHD6	99	72.210	Chrysemys_picta_bellii
ENSOCUG00000012394	CHD6	100	89.812	ENSCANG00000043435	CHD6	99	93.578	Colobus_angolensis_palliatus
ENSOCUG00000012394	CHD6	100	87.302	ENSCGRG00001002694	Chd6	99	87.339	Cricetulus_griseus_chok1gshd
ENSOCUG00000012394	CHD6	82	73.361	ENSDARG00000017244	chd6	79	73.329	Danio_rerio
ENSOCUG00000012394	CHD6	99	87.274	ENSDNOG00000004176	CHD6	99	87.274	Dasypus_novemcinctus
ENSOCUG00000012394	CHD6	99	88.737	ENSEASG00005023433	CHD6	95	97.876	Equus_asinus_asinus
ENSOCUG00000012394	CHD6	100	89.695	ENSECAG00000011761	CHD6	100	89.695	Equus_caballus
ENSOCUG00000012394	CHD6	72	79.620	ENSELUG00000012309	chd6	89	79.620	Esox_lucius
ENSOCUG00000012394	CHD6	100	89.474	ENSFCAG00000003572	CHD6	99	89.474	Felis_catus
ENSOCUG00000012394	CHD6	99	70.116	ENSFALG00000012563	CHD6	98	70.365	Ficedula_albicollis
ENSOCUG00000012394	CHD6	99	89.041	ENSFDAG00000013791	CHD6	99	89.041	Fukomys_damarensis
ENSOCUG00000012394	CHD6	73	69.621	ENSGMOG00000011715	chd6	85	69.621	Gadus_morhua
ENSOCUG00000012394	CHD6	78	69.846	ENSGACG00000000037	chd6	86	69.720	Gasterosteus_aculeatus
ENSOCUG00000012394	CHD6	100	89.812	ENSGGOG00000013123	CHD6	99	93.578	Gorilla_gorilla
ENSOCUG00000012394	CHD6	77	72.090	ENSHBUG00000014701	chd6	62	76.875	Haplochromis_burtoni
ENSOCUG00000012394	CHD6	100	89.146	ENSHGLG00000004548	CHD6	99	89.183	Heterocephalus_glaber_female
ENSOCUG00000012394	CHD6	100	89.146	ENSHGLG00100006401	CHD6	99	89.183	Heterocephalus_glaber_male
ENSOCUG00000012394	CHD6	76	77.446	ENSIPUG00000003692	chd6	74	76.008	Ictalurus_punctatus
ENSOCUG00000012394	CHD6	100	90.063	ENSSTOG00000013382	CHD6	99	90.063	Ictidomys_tridecemlineatus
ENSOCUG00000012394	CHD6	87	77.103	ENSLACG00000010881	CHD6	86	76.910	Latimeria_chalumnae
ENSOCUG00000012394	CHD6	74	80.000	ENSLOCG00000007386	chd6	83	75.408	Lepisosteus_oculatus
ENSOCUG00000012394	CHD6	100	88.742	ENSLAFG00000012144	CHD6	100	88.303	Loxodonta_africana
ENSOCUG00000012394	CHD6	100	90.602	ENSMFAG00000032830	CHD6	99	93.578	Macaca_fascicularis
ENSOCUG00000012394	CHD6	100	90.070	ENSMMUG00000020458	CHD6	99	93.578	Macaca_mulatta
ENSOCUG00000012394	CHD6	100	90.070	ENSMNEG00000040847	CHD6	99	93.578	Macaca_nemestrina
ENSOCUG00000012394	CHD6	99	89.963	ENSMLEG00000031965	CHD6	99	93.578	Mandrillus_leucophaeus
ENSOCUG00000012394	CHD6	77	71.676	ENSMAMG00000013111	chd6	62	77.379	Mastacembelus_armatus
ENSOCUG00000012394	CHD6	99	70.370	ENSMGAG00000001121	CHD6	99	71.208	Meleagris_gallopavo
ENSOCUG00000012394	CHD6	99	90.425	ENSMICG00000016641	CHD6	99	92.844	Microcebus_murinus
ENSOCUG00000012394	CHD6	89	78.498	ENSMODG00000000720	-	99	78.539	Monodelphis_domestica
ENSOCUG00000012394	CHD6	100	85.756	MGP_CAROLIEiJ_G0024604	Chd6	99	94.421	Mus_caroli
ENSOCUG00000012394	CHD6	100	85.830	ENSMUSG00000057133	Chd6	99	94.336	Mus_musculus
ENSOCUG00000012394	CHD6	100	85.830	MGP_PahariEiJ_G0026048	Chd6	99	94.759	Mus_pahari
ENSOCUG00000012394	CHD6	100	85.867	MGP_SPRETEiJ_G0025526	Chd6	99	94.421	Mus_spretus
ENSOCUG00000012394	CHD6	100	88.693	ENSMPUG00000017695	CHD6	99	88.730	Mustela_putorius_furo
ENSOCUG00000012394	CHD6	100	88.480	ENSMLUG00000016247	CHD6	99	88.480	Myotis_lucifugus
ENSOCUG00000012394	CHD6	78	72.962	ENSNBRG00000013839	chd6	79	71.793	Neolamprologus_brichardi
ENSOCUG00000012394	CHD6	99	88.396	ENSNLEG00000006496	CHD6	99	88.413	Nomascus_leucogenys
ENSOCUG00000012394	CHD6	100	89.842	ENSOPRG00000013376	-	99	89.842	Ochotona_princeps
ENSOCUG00000012394	CHD6	83	74.447	ENSONIG00000000393	chd6	85	73.971	Oreochromis_niloticus
ENSOCUG00000012394	CHD6	100	68.549	ENSOANG00000014347	CHD6	99	68.482	Ornithorhynchus_anatinus
ENSOCUG00000012394	CHD6	77	69.841	ENSORLG00020021891	chd6	95	85.972	Oryzias_latipes_hni
ENSOCUG00000012394	CHD6	99	88.864	ENSOGAG00000002427	CHD6	99	88.770	Otolemur_garnettii
ENSOCUG00000012394	CHD6	100	84.449	ENSOARG00000002597	CHD6	100	84.485	Ovis_aries
ENSOCUG00000012394	CHD6	100	89.510	ENSPPRG00000014756	CHD6	99	89.510	Panthera_pardus
ENSOCUG00000012394	CHD6	100	89.400	ENSPTIG00000011094	CHD6	99	89.400	Panthera_tigris_altaica
ENSOCUG00000012394	CHD6	100	89.960	ENSPTRG00000013504	CHD6	99	93.578	Pan_troglodytes
ENSOCUG00000012394	CHD6	100	89.960	ENSPANG00000025554	CHD6	99	93.394	Papio_anubis
ENSOCUG00000012394	CHD6	76	76.330	ENSPKIG00000005578	chd6	79	72.777	Paramormyrops_kingsleyae
ENSOCUG00000012394	CHD6	72	76.190	ENSPMGG00000014877	chd6	82	76.458	Periophthalmus_magnuspinnatus
ENSOCUG00000012394	CHD6	100	77.855	ENSPCIG00000028037	CHD6	99	78.406	Phascolarctos_cinereus
ENSOCUG00000012394	CHD6	71	70.183	ENSPLAG00000003128	chd6	67	73.286	Poecilia_latipinna
ENSOCUG00000012394	CHD6	71	70.226	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSOCUG00000012394	CHD6	100	89.816	ENSPPYG00000011016	CHD6	99	89.816	Pongo_abelii
ENSOCUG00000012394	CHD6	99	89.978	ENSPCOG00000001089	CHD6	99	93.394	Propithecus_coquereli
ENSOCUG00000012394	CHD6	78	74.886	ENSPNYG00000022516	chd6	78	73.573	Pundamilia_nyererei
ENSOCUG00000012394	CHD6	80	71.941	ENSPNAG00000012825	chd6	77	73.299	Pygocentrus_nattereri
ENSOCUG00000012394	CHD6	100	85.278	ENSRNOG00000016744	Chd6	99	85.604	Rattus_norvegicus
ENSOCUG00000012394	CHD6	100	89.776	ENSSBOG00000022089	CHD6	99	93.578	Saimiri_boliviensis_boliviensis
ENSOCUG00000012394	CHD6	99	77.553	ENSSHAG00000017072	CHD6	99	78.104	Sarcophilus_harrisii
ENSOCUG00000012394	CHD6	78	75.943	ENSSFOG00015012920	chd6	81	72.755	Scleropages_formosus
ENSOCUG00000012394	CHD6	58	99.342	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSOCUG00000012394	CHD6	100	89.075	ENSSSCG00000007360	CHD6	99	89.075	Sus_scrofa
ENSOCUG00000012394	CHD6	97	71.954	ENSTGUG00000003179	CHD6	99	72.372	Taeniopygia_guttata
ENSOCUG00000012394	CHD6	75	77.516	ENSTNIG00000017487	chd6	87	75.798	Tetraodon_nigroviridis
ENSOCUG00000012394	CHD6	100	85.588	ENSTTRG00000013438	CHD6	99	85.588	Tursiops_truncatus
ENSOCUG00000012394	CHD6	99	88.552	ENSUAMG00000024036	CHD6	95	96.332	Ursus_americanus
ENSOCUG00000012394	CHD6	99	89.952	ENSUMAG00000002017	CHD6	95	96.332	Ursus_maritimus
ENSOCUG00000012394	CHD6	94	89.239	ENSVPAG00000007941	CHD6	93	89.308	Vicugna_pacos
ENSOCUG00000012394	CHD6	100	89.621	ENSVVUG00000029164	CHD6	99	89.621	Vulpes_vulpes
ENSOCUG00000012394	CHD6	87	70.616	ENSXETG00000021445	chd6	87	70.520	Xenopus_tropicalis