EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000012570 (Gene tree)
Gene ID: 100357941
Gene Symbol: HTATSF1
Alias: -
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 19846 bases
Position: chrX:111010630-111030475
Accession: 100357941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000010819	RRM_1	PF00076.22	3.9e-17	1	2
ENSOCUP00000010819	RRM_1	PF00076.22	3.9e-17	2	2
ENSOCUP00000026312	RRM_1	PF00076.22	4.1e-17	1	2
ENSOCUP00000026312	RRM_1	PF00076.22	4.1e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000012566	HTATSF1-202	2271	-	ENSOCUP00000010819	757 (aa)	-	G1T3L5
ENSOCUT00000033263	HTATSF1-201	3513	XM_002720326	ENSOCUP00000026312	770 (aa)	XP_002720372	U3KM54

Gene Model

Click here to download ENSOCUG00000012570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000012570's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000012570	HTATSF1	99	82.082	ENSG00000102241	HTATSF1	100	93.033	Homo_sapiens
ENSOCUG00000012570	HTATSF1	54	60.142	ENSAPOG00000009823	htatsf1	92	60.142	Acanthochromis_polyacanthus
ENSOCUG00000012570	HTATSF1	99	78.893	ENSAMEG00000002921	HTATSF1	100	77.763	Ailuropoda_melanoleuca
ENSOCUG00000012570	HTATSF1	51	61.446	ENSACIG00000020459	htatsf1	95	59.410	Amphilophus_citrinellus
ENSOCUG00000012570	HTATSF1	94	79.354	ENSANAG00000025458	-	99	77.809	Aotus_nancymaae
ENSOCUG00000012570	HTATSF1	99	67.725	ENSANAG00000027986	-	97	68.819	Aotus_nancymaae
ENSOCUG00000012570	HTATSF1	54	59.584	ENSACLG00000008096	htatsf1	96	58.296	Astatotilapia_calliptera
ENSOCUG00000012570	HTATSF1	99	77.403	ENSBTAG00000055212	HTATSF1	99	76.227	Bos_taurus
ENSOCUG00000012570	HTATSF1	99	70.092	ENSBTAG00000032711	HTATSF1	99	71.053	Bos_taurus
ENSOCUG00000012570	HTATSF1	99	77.403	ENSBTAG00000054942	HTATSF1	99	76.227	Bos_taurus
ENSOCUG00000012570	HTATSF1	99	80.789	ENSCJAG00000003676	HTATSF1	99	79.763	Callithrix_jacchus
ENSOCUG00000012570	HTATSF1	99	79.145	ENSCAFG00000023294	HTATSF1	100	78.077	Canis_familiaris
ENSOCUG00000012570	HTATSF1	99	79.145	ENSCAFG00020024635	HTATSF1	100	78.718	Canis_lupus_dingo
ENSOCUG00000012570	HTATSF1	99	76.883	ENSCHIG00000000312	HTATSF1	99	75.840	Capra_hircus
ENSOCUG00000012570	HTATSF1	99	80.820	ENSTSYG00000028876	HTATSF1	99	81.477	Carlito_syrichta
ENSOCUG00000012570	HTATSF1	99	77.045	ENSCCAG00000025329	-	99	75.462	Cebus_capucinus
ENSOCUG00000012570	HTATSF1	99	81.159	ENSCCAG00000022701	-	99	80.395	Cebus_capucinus
ENSOCUG00000012570	HTATSF1	99	82.299	ENSCATG00000029963	HTATSF1	99	82.260	Cercocebus_atys
ENSOCUG00000012570	HTATSF1	100	74.674	ENSCLAG00000002718	HTATSF1	99	75.326	Chinchilla_lanigera
ENSOCUG00000012570	HTATSF1	99	82.299	ENSCSAG00000007505	HTATSF1	99	82.260	Chlorocebus_sabaeus
ENSOCUG00000012570	HTATSF1	99	82.166	ENSCANG00000028495	HTATSF1	99	82.129	Colobus_angolensis_palliatus
ENSOCUG00000012570	HTATSF1	81	77.725	ENSCGRG00001021602	Htatsf1	100	73.223	Cricetulus_griseus_chok1gshd
ENSOCUG00000012570	HTATSF1	73	70.877	ENSCGRG00000002085	Htatsf1	100	67.310	Cricetulus_griseus_crigri
ENSOCUG00000012570	HTATSF1	99	78.851	ENSDNOG00000002254	HTATSF1	99	78.272	Dasypus_novemcinctus
ENSOCUG00000012570	HTATSF1	99	42.838	ENSETEG00000006377	-	74	46.208	Echinops_telfairi
ENSOCUG00000012570	HTATSF1	51	49.406	ENSEBUG00000001534	htatsf1	83	49.531	Eptatretus_burgeri
ENSOCUG00000012570	HTATSF1	99	76.265	ENSEASG00005003440	HTATSF1	99	74.810	Equus_asinus_asinus
ENSOCUG00000012570	HTATSF1	99	76.265	ENSECAG00000009156	HTATSF1	99	77.191	Equus_caballus
ENSOCUG00000012570	HTATSF1	99	66.710	ENSEEUG00000010668	HTATSF1	99	66.406	Erinaceus_europaeus
ENSOCUG00000012570	HTATSF1	100	78.920	ENSFCAG00000031924	HTATSF1	100	77.606	Felis_catus
ENSOCUG00000012570	HTATSF1	50	67.430	ENSFALG00000003728	HTATSF1	87	66.667	Ficedula_albicollis
ENSOCUG00000012570	HTATSF1	99	74.570	ENSFDAG00000008617	HTATSF1	99	75.195	Fukomys_damarensis
ENSOCUG00000012570	HTATSF1	50	68.394	ENSGALG00000006410	HTATSF1	90	65.860	Gallus_gallus
ENSOCUG00000012570	HTATSF1	57	58.093	ENSGACG00000020459	htatsf1	99	58.093	Gasterosteus_aculeatus
ENSOCUG00000012570	HTATSF1	99	82.082	ENSGGOG00000026072	HTATSF1	99	80.649	Gorilla_gorilla
ENSOCUG00000012570	HTATSF1	54	59.584	ENSHBUG00000004392	htatsf1	96	58.296	Haplochromis_burtoni
ENSOCUG00000012570	HTATSF1	98	75.632	ENSHGLG00000005328	HTATSF1	99	75.065	Heterocephalus_glaber_female
ENSOCUG00000012570	HTATSF1	50	60.459	ENSHCOG00000009056	htatsf1	90	60.101	Hippocampus_comes
ENSOCUG00000012570	HTATSF1	99	80.443	ENSSTOG00000012505	HTATSF1	99	80.366	Ictidomys_tridecemlineatus
ENSOCUG00000012570	HTATSF1	55	58.916	ENSKMAG00000007622	htatsf1	97	58.916	Kryptolebias_marmoratus
ENSOCUG00000012570	HTATSF1	59	41.342	ENSLOCG00000015118	htatsf1	95	40.919	Lepisosteus_oculatus
ENSOCUG00000012570	HTATSF1	99	75.785	ENSLAFG00000014307	HTATSF1	90	78.150	Loxodonta_africana
ENSOCUG00000012570	HTATSF1	99	82.299	ENSMFAG00000044705	HTATSF1	99	82.260	Macaca_fascicularis
ENSOCUG00000012570	HTATSF1	99	82.299	ENSMMUG00000006450	HTATSF1	99	82.260	Macaca_mulatta
ENSOCUG00000012570	HTATSF1	99	75.661	ENSMNEG00000024084	HTATSF1	99	76.447	Macaca_nemestrina
ENSOCUG00000012570	HTATSF1	99	82.228	ENSMLEG00000035511	HTATSF1	99	82.392	Mandrillus_leucophaeus
ENSOCUG00000012570	HTATSF1	50	62.595	ENSMAMG00000021225	htatsf1	83	62.198	Mastacembelus_armatus
ENSOCUG00000012570	HTATSF1	54	59.584	ENSMZEG00005000485	htatsf1	96	58.296	Maylandia_zebra
ENSOCUG00000012570	HTATSF1	100	74.008	ENSMAUG00000007235	Htatsf1	100	72.599	Mesocricetus_auratus
ENSOCUG00000012570	HTATSF1	99	78.811	ENSMICG00000009348	HTATSF1	99	76.853	Microcebus_murinus
ENSOCUG00000012570	HTATSF1	100	70.328	ENSMOCG00000023007	-	100	70.670	Microtus_ochrogaster
ENSOCUG00000012570	HTATSF1	99	70.235	ENSMOCG00000022370	-	95	68.961	Microtus_ochrogaster
ENSOCUG00000012570	HTATSF1	54	58.661	ENSMMOG00000011013	htatsf1	95	58.661	Mola_mola
ENSOCUG00000012570	HTATSF1	50	72.324	ENSMODG00000014087	-	84	72.324	Monodelphis_domestica
ENSOCUG00000012570	HTATSF1	54	58.140	ENSMALG00000019977	htatsf1	94	58.140	Monopterus_albus
ENSOCUG00000012570	HTATSF1	100	72.266	MGP_CAROLIEiJ_G0033094	Htatsf1	99	71.667	Mus_caroli
ENSOCUG00000012570	HTATSF1	98	74.635	ENSMUSG00000067873	Htatsf1	99	73.333	Mus_musculus
ENSOCUG00000012570	HTATSF1	98	74.502	MGP_SPRETEiJ_G0034249	Htatsf1	99	73.205	Mus_spretus
ENSOCUG00000012570	HTATSF1	99	79.124	ENSMPUG00000001901	HTATSF1	99	77.073	Mustela_putorius_furo
ENSOCUG00000012570	HTATSF1	99	70.665	ENSMLUG00000009234	-	100	67.821	Myotis_lucifugus
ENSOCUG00000012570	HTATSF1	99	72.610	ENSMLUG00000028418	-	99	71.762	Myotis_lucifugus
ENSOCUG00000012570	HTATSF1	98	75.335	ENSNGAG00000017831	Htatsf1	99	75.330	Nannospalax_galili
ENSOCUG00000012570	HTATSF1	54	59.584	ENSNBRG00000003818	htatsf1	96	58.296	Neolamprologus_brichardi
ENSOCUG00000012570	HTATSF1	99	80.552	ENSNLEG00000002746	HTATSF1	99	81.078	Nomascus_leucogenys
ENSOCUG00000012570	HTATSF1	52	69.697	ENSMEUG00000004133	-	86	71.348	Notamacropus_eugenii
ENSOCUG00000012570	HTATSF1	53	60.329	ENSONIG00000008638	htatsf1	96	57.562	Oreochromis_niloticus
ENSOCUG00000012570	HTATSF1	54	65.931	ENSOANG00000011674	-	85	74.063	Ornithorhynchus_anatinus
ENSOCUG00000012570	HTATSF1	98	77.364	ENSOGAG00000005565	HTATSF1	99	76.843	Otolemur_garnettii
ENSOCUG00000012570	HTATSF1	99	72.927	ENSOARG00000000481	-	99	72.833	Ovis_aries
ENSOCUG00000012570	HTATSF1	99	76.883	ENSOARG00000011215	-	99	75.032	Ovis_aries
ENSOCUG00000012570	HTATSF1	99	82.213	ENSPPAG00000024268	HTATSF1	99	80.779	Pan_paniscus
ENSOCUG00000012570	HTATSF1	100	79.226	ENSPPRG00000014209	HTATSF1	100	77.548	Panthera_pardus
ENSOCUG00000012570	HTATSF1	93	78.056	ENSPTIG00000016887	HTATSF1	96	76.250	Panthera_tigris_altaica
ENSOCUG00000012570	HTATSF1	99	82.213	ENSPTRG00000044591	HTATSF1	99	80.779	Pan_troglodytes
ENSOCUG00000012570	HTATSF1	99	70.542	ENSPANG00000010946	HTATSF1	100	69.369	Papio_anubis
ENSOCUG00000012570	HTATSF1	98	73.976	ENSPEMG00000022397	Htatsf1	99	73.018	Peromyscus_maniculatus_bairdii
ENSOCUG00000012570	HTATSF1	51	67.784	ENSPCIG00000018896	-	87	67.784	Phascolarctos_cinereus
ENSOCUG00000012570	HTATSF1	51	61.481	ENSPLAG00000007532	htatsf1	89	61.481	Poecilia_latipinna
ENSOCUG00000012570	HTATSF1	85	84.056	ENSPPYG00000020765	HTATSF1	84	83.851	Pongo_abelii
ENSOCUG00000012570	HTATSF1	98	65.416	ENSPCAG00000010576	HTATSF1	99	65.486	Procavia_capensis
ENSOCUG00000012570	HTATSF1	99	80.658	ENSPCOG00000021823	HTATSF1	99	78.599	Propithecus_coquereli
ENSOCUG00000012570	HTATSF1	99	69.565	ENSPVAG00000010281	HTATSF1	75	81.574	Pteropus_vampyrus
ENSOCUG00000012570	HTATSF1	54	59.584	ENSPNYG00000016693	htatsf1	96	58.296	Pundamilia_nyererei
ENSOCUG00000012570	HTATSF1	99	74.872	ENSRNOG00000027761	Htatsf1	99	74.359	Rattus_norvegicus
ENSOCUG00000012570	HTATSF1	99	71.731	ENSRBIG00000035486	HTATSF1	100	70.375	Rhinopithecus_bieti
ENSOCUG00000012570	HTATSF1	99	81.770	ENSRROG00000021939	HTATSF1	99	81.735	Rhinopithecus_roxellana
ENSOCUG00000012570	HTATSF1	99	79.416	ENSSBOG00000027186	-	100	78.137	Saimiri_boliviensis_boliviensis
ENSOCUG00000012570	HTATSF1	99	77.207	ENSSBOG00000017914	-	99	75.494	Saimiri_boliviensis_boliviensis
ENSOCUG00000012570	HTATSF1	50	70.000	ENSSHAG00000006440	-	97	70.000	Sarcophilus_harrisii
ENSOCUG00000012570	HTATSF1	50	62.663	ENSSFOG00015012002	htatsf1	82	62.663	Scleropages_formosus
ENSOCUG00000012570	HTATSF1	54	58.796	ENSSLDG00000016880	htatsf1	94	58.796	Seriola_lalandi_dorsalis
ENSOCUG00000012570	HTATSF1	99	63.818	ENSSARG00000005193	HTATSF1	97	62.533	Sorex_araneus
ENSOCUG00000012570	HTATSF1	50	68.490	ENSSPUG00000014767	HTATSF1	84	68.490	Sphenodon_punctatus
ENSOCUG00000012570	HTATSF1	50	62.437	ENSSPAG00000000732	htatsf1	91	59.382	Stegastes_partitus
ENSOCUG00000012570	HTATSF1	99	72.000	ENSSSCG00000023062	HTATSF1	99	71.317	Sus_scrofa
ENSOCUG00000012570	HTATSF1	51	62.095	ENSTNIG00000016140	htatsf1	83	61.930	Tetraodon_nigroviridis
ENSOCUG00000012570	HTATSF1	85	68.576	ENSTTRG00000002269	HTATSF1	96	68.362	Tursiops_truncatus
ENSOCUG00000012570	HTATSF1	100	79.554	ENSUAMG00000012048	HTATSF1	99	77.620	Ursus_americanus
ENSOCUG00000012570	HTATSF1	100	78.581	ENSUMAG00000010393	HTATSF1	99	76.508	Ursus_maritimus
ENSOCUG00000012570	HTATSF1	91	71.552	ENSVPAG00000004569	HTATSF1	99	70.899	Vicugna_pacos
ENSOCUG00000012570	HTATSF1	99	78.886	ENSVVUG00000024802	HTATSF1	100	75.031	Vulpes_vulpes