EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000012646 (Gene tree)
Gene ID: 100340288
Gene Symbol: DKC1
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 11265 bases
Position: chrGL018783:925103-936367
Accession: 100340288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000019728	TruB_N	PF01509.18	1.4e-20	1	1
ENSOCUP00000019728	PUA	PF01472.20	5.9e-18	1	1
ENSOCUP00000019728	DKCLD	PF08068.12	9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000031850	DKC1-201	3450	-	ENSOCUP00000019728	512 (aa)	XP_002722254	G1TRS0

Gene Model

Click here to download ENSOCUG00000012646's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000012646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000012646	DKC1	100	92.816	ENSG00000130826	DKC1	99	98.537	Homo_sapiens
ENSOCUG00000012646	DKC1	90	78.085	ENSAPOG00000007799	dkc1	85	80.726	Acanthochromis_polyacanthus
ENSOCUG00000012646	DKC1	89	94.760	ENSAMEG00000002776	DKC1	97	91.532	Ailuropoda_melanoleuca
ENSOCUG00000012646	DKC1	86	80.455	ENSACIG00000022614	dkc1	86	80.455	Amphilophus_citrinellus
ENSOCUG00000012646	DKC1	95	76.364	ENSAOCG00000013159	dkc1	86	80.137	Amphiprion_ocellaris
ENSOCUG00000012646	DKC1	95	76.364	ENSAPEG00000002284	dkc1	87	80.594	Amphiprion_percula
ENSOCUG00000012646	DKC1	79	83.902	ENSATEG00000013682	dkc1	89	78.366	Anabas_testudineus
ENSOCUG00000012646	DKC1	91	83.191	ENSACAG00000015600	DKC1	80	83.191	Anolis_carolinensis
ENSOCUG00000012646	DKC1	96	92.276	ENSANAG00000022732	DKC1	97	92.555	Aotus_nancymaae
ENSOCUG00000012646	DKC1	77	86.076	ENSACLG00000015605	dkc1	80	86.076	Astatotilapia_calliptera
ENSOCUG00000012646	DKC1	98	71.869	ENSAMXG00000017108	dkc1	98	73.218	Astyanax_mexicanus
ENSOCUG00000012646	DKC1	99	91.321	ENSBTAG00000013045	DKC1	97	90.891	Bos_taurus
ENSOCUG00000012646	DKC1	81	67.312	WBGene00010478	K01G5.5	97	64.531	Caenorhabditis_elegans
ENSOCUG00000012646	DKC1	100	91.667	ENSCJAG00000004210	DKC1	97	92.771	Callithrix_jacchus
ENSOCUG00000012646	DKC1	100	88.740	ENSCAFG00000019620	-	97	90.099	Canis_familiaris
ENSOCUG00000012646	DKC1	96	79.276	ENSCAFG00000009311	-	96	78.471	Canis_familiaris
ENSOCUG00000012646	DKC1	96	79.108	ENSCAFG00020009379	-	92	78.296	Canis_lupus_dingo
ENSOCUG00000012646	DKC1	100	88.740	ENSCAFG00020008918	-	97	90.099	Canis_lupus_dingo
ENSOCUG00000012646	DKC1	100	91.016	ENSCHIG00000017392	DKC1	97	91.903	Capra_hircus
ENSOCUG00000012646	DKC1	99	91.188	ENSTSYG00000007681	DKC1	96	92.063	Carlito_syrichta
ENSOCUG00000012646	DKC1	88	89.333	ENSCAPG00000003342	DKC1	99	92.874	Cavia_aperea
ENSOCUG00000012646	DKC1	100	91.650	ENSCPOG00000008825	DKC1	97	92.354	Cavia_porcellus
ENSOCUG00000012646	DKC1	100	83.495	ENSCCAG00000027418	DKC1	96	84.476	Cebus_capucinus
ENSOCUG00000012646	DKC1	100	92.039	ENSCATG00000033602	DKC1	97	93.159	Cercocebus_atys
ENSOCUG00000012646	DKC1	96	92.727	ENSCLAG00000000720	DKC1	94	93.067	Chinchilla_lanigera
ENSOCUG00000012646	DKC1	100	92.233	ENSCSAG00000006706	DKC1	97	93.360	Chlorocebus_sabaeus
ENSOCUG00000012646	DKC1	92	83.789	ENSCPBG00000005858	DKC1	94	87.220	Chrysemys_picta_bellii
ENSOCUG00000012646	DKC1	84	74.023	ENSCING00000004599	-	84	73.903	Ciona_intestinalis
ENSOCUG00000012646	DKC1	83	75.059	ENSCSAVG00000010047	-	96	73.903	Ciona_savignyi
ENSOCUG00000012646	DKC1	100	92.233	ENSCANG00000027987	DKC1	97	93.360	Colobus_angolensis_palliatus
ENSOCUG00000012646	DKC1	96	66.735	ENSCGRG00001016789	-	93	67.811	Cricetulus_griseus_chok1gshd
ENSOCUG00000012646	DKC1	96	91.348	ENSCGRG00001014574	-	97	91.751	Cricetulus_griseus_chok1gshd
ENSOCUG00000012646	DKC1	98	66.004	ENSCGRG00000014809	-	96	65.789	Cricetulus_griseus_crigri
ENSOCUG00000012646	DKC1	96	91.348	ENSCGRG00000016075	-	97	91.751	Cricetulus_griseus_crigri
ENSOCUG00000012646	DKC1	92	76.360	ENSCSEG00000012633	dkc1	93	80.320	Cynoglossus_semilaevis
ENSOCUG00000012646	DKC1	85	79.680	ENSCVAG00000010155	dkc1	83	80.137	Cyprinodon_variegatus
ENSOCUG00000012646	DKC1	78	85.930	ENSDARG00000016484	dkc1	91	77.124	Danio_rerio
ENSOCUG00000012646	DKC1	100	90.874	ENSDNOG00000004218	DKC1	91	94.194	Dasypus_novemcinctus
ENSOCUG00000012646	DKC1	59	83.333	ENSDORG00000013566	-	100	83.333	Dipodomys_ordii
ENSOCUG00000012646	DKC1	86	69.388	FBgn0259937	Nop60B	89	68.966	Drosophila_melanogaster
ENSOCUG00000012646	DKC1	91	87.366	ENSETEG00000016095	DKC1	95	86.510	Echinops_telfairi
ENSOCUG00000012646	DKC1	65	78.916	ENSEBUG00000015962	dkc1	99	82.253	Eptatretus_burgeri
ENSOCUG00000012646	DKC1	96	91.071	ENSEASG00005007484	DKC1	97	91.071	Equus_asinus_asinus
ENSOCUG00000012646	DKC1	96	91.071	ENSECAG00000023524	DKC1	97	91.071	Equus_caballus
ENSOCUG00000012646	DKC1	83	90.588	ENSEEUG00000003323	DKC1	99	90.588	Erinaceus_europaeus
ENSOCUG00000012646	DKC1	88	78.901	ENSELUG00000014538	dkc1	89	79.910	Esox_lucius
ENSOCUG00000012646	DKC1	100	90.272	ENSFCAG00000006577	DKC1	97	91.331	Felis_catus
ENSOCUG00000012646	DKC1	85	83.973	ENSFALG00000011496	DKC1	85	83.370	Ficedula_albicollis
ENSOCUG00000012646	DKC1	96	91.057	ENSFDAG00000002516	DKC1	97	91.463	Fukomys_damarensis
ENSOCUG00000012646	DKC1	85	80.046	ENSFHEG00000004627	dkc1	85	79.909	Fundulus_heteroclitus
ENSOCUG00000012646	DKC1	76	83.376	ENSGMOG00000017277	dkc1	100	83.376	Gadus_morhua
ENSOCUG00000012646	DKC1	85	86.468	ENSGALG00000005054	DKC1	85	85.586	Gallus_gallus
ENSOCUG00000012646	DKC1	86	79.365	ENSGAFG00000011486	dkc1	74	79.365	Gambusia_affinis
ENSOCUG00000012646	DKC1	77	86.582	ENSGACG00000004373	dkc1	96	89.058	Gasterosteus_aculeatus
ENSOCUG00000012646	DKC1	92	84.211	ENSGAGG00000011330	DKC1	89	86.022	Gopherus_agassizii
ENSOCUG00000012646	DKC1	100	92.816	ENSGGOG00000001045	DKC1	97	93.964	Gorilla_gorilla
ENSOCUG00000012646	DKC1	86	80.410	ENSHBUG00000012436	dkc1	85	80.410	Haplochromis_burtoni
ENSOCUG00000012646	DKC1	96	91.400	ENSHGLG00000000649	DKC1	97	91.600	Heterocephalus_glaber_female
ENSOCUG00000012646	DKC1	95	91.296	ENSHGLG00100001153	DKC1	97	91.498	Heterocephalus_glaber_male
ENSOCUG00000012646	DKC1	86	79.592	ENSHCOG00000021099	dkc1	86	80.045	Hippocampus_comes
ENSOCUG00000012646	DKC1	90	79.393	ENSIPUG00000010309	dkc1	88	78.649	Ictalurus_punctatus
ENSOCUG00000012646	DKC1	91	94.861	ENSSTOG00000001074	-	96	94.861	Ictidomys_tridecemlineatus
ENSOCUG00000012646	DKC1	96	82.565	ENSSTOG00000011904	-	93	82.766	Ictidomys_tridecemlineatus
ENSOCUG00000012646	DKC1	100	84.466	ENSSTOG00000020149	-	97	83.903	Ictidomys_tridecemlineatus
ENSOCUG00000012646	DKC1	59	83.333	ENSJJAG00000010086	-	100	83.333	Jaculus_jaculus
ENSOCUG00000012646	DKC1	86	78.733	ENSKMAG00000008010	dkc1	86	78.733	Kryptolebias_marmoratus
ENSOCUG00000012646	DKC1	86	80.182	ENSLBEG00000019122	dkc1	92	78.017	Labrus_bergylta
ENSOCUG00000012646	DKC1	92	80.213	ENSLACG00000014025	DKC1	91	88.442	Latimeria_chalumnae
ENSOCUG00000012646	DKC1	86	82.247	ENSLOCG00000013713	dkc1	88	83.448	Lepisosteus_oculatus
ENSOCUG00000012646	DKC1	96	91.147	ENSLAFG00000000221	DKC1	97	91.549	Loxodonta_africana
ENSOCUG00000012646	DKC1	100	92.039	ENSMFAG00000032398	DKC1	83	93.159	Macaca_fascicularis
ENSOCUG00000012646	DKC1	100	92.233	ENSMMUG00000005768	DKC1	97	93.360	Macaca_mulatta
ENSOCUG00000012646	DKC1	100	92.233	ENSMNEG00000034503	DKC1	97	93.360	Macaca_nemestrina
ENSOCUG00000012646	DKC1	100	92.233	ENSMLEG00000034422	DKC1	97	93.360	Mandrillus_leucophaeus
ENSOCUG00000012646	DKC1	79	85.222	ENSMAMG00000005427	dkc1	90	86.035	Mastacembelus_armatus
ENSOCUG00000012646	DKC1	86	80.638	ENSMZEG00005014503	dkc1	85	80.638	Maylandia_zebra
ENSOCUG00000012646	DKC1	78	86.935	ENSMGAG00000009238	DKC1	87	85.749	Meleagris_gallopavo
ENSOCUG00000012646	DKC1	59	83.667	ENSMAUG00000016454	-	100	83.667	Mesocricetus_auratus
ENSOCUG00000012646	DKC1	89	84.130	ENSMICG00000002818	-	99	84.066	Microcebus_murinus
ENSOCUG00000012646	DKC1	100	91.406	ENSMICG00000038751	-	97	92.016	Microcebus_murinus
ENSOCUG00000012646	DKC1	59	80.667	ENSMOCG00000001169	-	100	80.667	Microtus_ochrogaster
ENSOCUG00000012646	DKC1	77	86.076	ENSMMOG00000020348	dkc1	86	86.076	Mola_mola
ENSOCUG00000012646	DKC1	84	86.916	ENSMODG00000009243	DKC1	78	85.242	Monodelphis_domestica
ENSOCUG00000012646	DKC1	86	80.182	ENSMALG00000009454	dkc1	85	79.638	Monopterus_albus
ENSOCUG00000012646	DKC1	96	80.517	MGP_CAROLIEiJ_G0033191	Dkc1	100	91.892	Mus_caroli
ENSOCUG00000012646	DKC1	96	91.700	ENSMUSG00000031403	Dkc1	97	91.700	Mus_musculus
ENSOCUG00000012646	DKC1	96	90.726	MGP_PahariEiJ_G0031735	Dkc1	97	90.726	Mus_pahari
ENSOCUG00000012646	DKC1	96	90.909	MGP_SPRETEiJ_G0034351	Dkc1	97	91.111	Mus_spretus
ENSOCUG00000012646	DKC1	96	89.881	ENSMPUG00000016136	DKC1	93	89.881	Mustela_putorius_furo
ENSOCUG00000012646	DKC1	91	85.714	ENSMLUG00000011918	DKC1	97	82.772	Myotis_lucifugus
ENSOCUG00000012646	DKC1	59	83.333	ENSNGAG00000015724	-	100	83.333	Nannospalax_galili
ENSOCUG00000012646	DKC1	77	86.582	ENSNBRG00000005638	dkc1	80	86.582	Neolamprologus_brichardi
ENSOCUG00000012646	DKC1	100	92.427	ENSNLEG00000014323	DKC1	96	93.750	Nomascus_leucogenys
ENSOCUG00000012646	DKC1	83	86.288	ENSMEUG00000001066	DKC1	99	81.400	Notamacropus_eugenii
ENSOCUG00000012646	DKC1	85	90.437	ENSOPRG00000005248	DKC1	87	90.437	Ochotona_princeps
ENSOCUG00000012646	DKC1	59	84.333	ENSODEG00000000549	-	100	84.333	Octodon_degus
ENSOCUG00000012646	DKC1	85	95.183	ENSODEG00000011816	-	91	93.333	Octodon_degus
ENSOCUG00000012646	DKC1	86	81.633	ENSONIG00000013889	dkc1	86	81.633	Oreochromis_niloticus
ENSOCUG00000012646	DKC1	90	86.354	ENSOANG00000008713	-	88	90.443	Ornithorhynchus_anatinus
ENSOCUG00000012646	DKC1	63	63.930	ENSOANG00000022295	-	84	66.777	Ornithorhynchus_anatinus
ENSOCUG00000012646	DKC1	90	77.778	ENSORLG00000018748	dkc1	90	77.447	Oryzias_latipes
ENSOCUG00000012646	DKC1	91	77.825	ENSOMEG00000005786	dkc1	82	86.134	Oryzias_melastigma
ENSOCUG00000012646	DKC1	96	91.304	ENSOGAG00000003399	DKC1	97	91.502	Otolemur_garnettii
ENSOCUG00000012646	DKC1	100	90.039	ENSOARG00000003047	DKC1	97	90.891	Ovis_aries
ENSOCUG00000012646	DKC1	100	92.427	ENSPPAG00000023820	DKC1	97	93.561	Pan_paniscus
ENSOCUG00000012646	DKC1	91	93.562	ENSPPRG00000009104	DKC1	97	91.935	Panthera_pardus
ENSOCUG00000012646	DKC1	87	91.704	ENSPTIG00000017469	DKC1	93	90.126	Panthera_tigris_altaica
ENSOCUG00000012646	DKC1	100	92.816	ENSPTRG00000022449	DKC1	97	93.964	Pan_troglodytes
ENSOCUG00000012646	DKC1	96	93.763	ENSPTRG00000043416	-	84	93.964	Pan_troglodytes
ENSOCUG00000012646	DKC1	100	92.233	ENSPANG00000011978	DKC1	97	93.360	Papio_anubis
ENSOCUG00000012646	DKC1	85	81.881	ENSPKIG00000008443	dkc1	91	80.594	Paramormyrops_kingsleyae
ENSOCUG00000012646	DKC1	72	90.591	ENSPSIG00000013765	DKC1	89	90.811	Pelodiscus_sinensis
ENSOCUG00000012646	DKC1	86	75.561	ENSPMGG00000004097	dkc1	82	75.561	Periophthalmus_magnuspinnatus
ENSOCUG00000012646	DKC1	96	57.344	ENSPEMG00000013348	Dkc1	96	94.872	Peromyscus_maniculatus_bairdii
ENSOCUG00000012646	DKC1	88	87.528	ENSPCIG00000016706	DKC1	76	86.871	Phascolarctos_cinereus
ENSOCUG00000012646	DKC1	86	80.000	ENSPFOG00000018653	dkc1	85	80.000	Poecilia_formosa
ENSOCUG00000012646	DKC1	86	80.000	ENSPLAG00000003272	dkc1	77	80.000	Poecilia_latipinna
ENSOCUG00000012646	DKC1	86	80.000	ENSPMEG00000010413	dkc1	85	80.000	Poecilia_mexicana
ENSOCUG00000012646	DKC1	86	80.000	ENSPREG00000004100	dkc1	84	79.545	Poecilia_reticulata
ENSOCUG00000012646	DKC1	99	92.549	ENSPPYG00000020892	DKC1	97	93.699	Pongo_abelii
ENSOCUG00000012646	DKC1	73	94.652	ENSPCAG00000015034	DKC1	73	94.652	Procavia_capensis
ENSOCUG00000012646	DKC1	100	92.621	ENSPCOG00000026874	DKC1	96	93.750	Propithecus_coquereli
ENSOCUG00000012646	DKC1	96	89.516	ENSPVAG00000009222	DKC1	97	89.315	Pteropus_vampyrus
ENSOCUG00000012646	DKC1	86	79.505	ENSPNYG00000020063	dkc1	87	79.505	Pundamilia_nyererei
ENSOCUG00000012646	DKC1	91	79.741	ENSPNAG00000005780	dkc1	87	79.741	Pygocentrus_nattereri
ENSOCUG00000012646	DKC1	96	82.353	ENSRNOG00000055562	Dkc1	97	82.353	Rattus_norvegicus
ENSOCUG00000012646	DKC1	100	92.233	ENSRBIG00000028457	DKC1	83	93.360	Rhinopithecus_bieti
ENSOCUG00000012646	DKC1	100	92.233	ENSRROG00000044780	DKC1	97	93.360	Rhinopithecus_roxellana
ENSOCUG00000012646	DKC1	75	71.615	YLR175W	-	98	62.055	Saccharomyces_cerevisiae
ENSOCUG00000012646	DKC1	100	92.621	ENSSBOG00000033746	DKC1	97	93.159	Saimiri_boliviensis_boliviensis
ENSOCUG00000012646	DKC1	97	81.800	ENSSHAG00000002463	DKC1	97	85.991	Sarcophilus_harrisii
ENSOCUG00000012646	DKC1	91	79.487	ENSSFOG00015009585	dkc1	89	79.957	Scleropages_formosus
ENSOCUG00000012646	DKC1	86	81.093	ENSSMAG00000002552	dkc1	88	80.778	Scophthalmus_maximus
ENSOCUG00000012646	DKC1	85	81.465	ENSSDUG00000009963	dkc1	85	81.093	Seriola_dumerili
ENSOCUG00000012646	DKC1	77	87.277	ENSSLDG00000019342	dkc1	92	79.773	Seriola_lalandi_dorsalis
ENSOCUG00000012646	DKC1	92	83.298	ENSSARG00000001822	DKC1	94	83.087	Sorex_araneus
ENSOCUG00000012646	DKC1	96	80.157	ENSSPUG00000018907	DKC1	90	83.579	Sphenodon_punctatus
ENSOCUG00000012646	DKC1	90	76.907	ENSSPAG00000002585	dkc1	82	79.458	Stegastes_partitus
ENSOCUG00000012646	DKC1	100	89.143	ENSSSCG00000012823	DKC1	97	90.335	Sus_scrofa
ENSOCUG00000012646	DKC1	89	80.879	ENSTGUG00000006781	DKC1	98	81.757	Taeniopygia_guttata
ENSOCUG00000012646	DKC1	86	80.045	ENSTRUG00000004413	dkc1	86	80.045	Takifugu_rubripes
ENSOCUG00000012646	DKC1	86	64.286	ENSTNIG00000002582	dkc1	87	64.286	Tetraodon_nigroviridis
ENSOCUG00000012646	DKC1	71	91.484	ENSTBEG00000011262	DKC1	95	91.329	Tupaia_belangeri
ENSOCUG00000012646	DKC1	74	92.459	ENSTTRG00000008089	DKC1	74	92.459	Tursiops_truncatus
ENSOCUG00000012646	DKC1	95	90.927	ENSUAMG00000022721	DKC1	93	95.238	Ursus_americanus
ENSOCUG00000012646	DKC1	95	90.524	ENSUMAG00000016899	DKC1	92	98.148	Ursus_maritimus
ENSOCUG00000012646	DKC1	99	87.643	ENSVVUG00000020734	-	87	88.757	Vulpes_vulpes
ENSOCUG00000012646	DKC1	96	75.453	ENSVVUG00000021671	-	91	74.245	Vulpes_vulpes
ENSOCUG00000012646	DKC1	94	78.914	ENSXETG00000032517	DKC1	85	82.727	Xenopus_tropicalis
ENSOCUG00000012646	DKC1	86	79.138	ENSXCOG00000005498	dkc1	92	79.138	Xiphophorus_couchianus
ENSOCUG00000012646	DKC1	86	79.773	ENSXMAG00000004919	dkc1	86	79.773	Xiphophorus_maculatus