EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000012722 (Gene tree)
Gene ID: 100348734
Gene Symbol: -
Alias: -
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 25874 bases
Position: chr7:137895326-137921199
Accession: 100348734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000021051	SF3b1	PF08920.10	7.6e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000026734	-	5983	XM_008258870	ENSOCUP00000021051	1131 (aa)	XP_008257092	G1TVG7

Gene Model

Click here to download ENSOCUG00000012722's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000012722's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000012722	-	96	98.985	ENSG00000115524	SF3B1	94	97.788	Homo_sapiens
ENSOCUG00000012722	-	96	96.218	ENSAPOG00000011894	sf3b1	82	96.218	Acanthochromis_polyacanthus
ENSOCUG00000012722	-	96	98.985	ENSAMEG00000013809	SF3B1	83	98.985	Ailuropoda_melanoleuca
ENSOCUG00000012722	-	96	95.295	ENSACIG00000020910	sf3b1	80	94.858	Amphilophus_citrinellus
ENSOCUG00000012722	-	96	96.218	ENSAOCG00000004478	sf3b1	82	96.218	Amphiprion_ocellaris
ENSOCUG00000012722	-	96	96.218	ENSAPEG00000012937	sf3b1	82	96.218	Amphiprion_percula
ENSOCUG00000012722	-	96	96.033	ENSATEG00000020435	sf3b1	82	96.115	Anabas_testudineus
ENSOCUG00000012722	-	96	98.801	ENSAPLG00000003993	SF3B1	83	98.801	Anas_platyrhynchos
ENSOCUG00000012722	-	96	98.432	ENSACAG00000009612	SF3B1	83	98.432	Anolis_carolinensis
ENSOCUG00000012722	-	96	98.985	ENSANAG00000021577	SF3B1	94	98.985	Aotus_nancymaae
ENSOCUG00000012722	-	96	95.387	ENSACLG00000023470	sf3b1	82	95.387	Astatotilapia_calliptera
ENSOCUG00000012722	-	96	96.494	ENSAMXG00000002219	sf3b1	82	96.494	Astyanax_mexicanus
ENSOCUG00000012722	-	96	98.893	ENSBTAG00000008915	SF3B1	83	98.893	Bos_taurus
ENSOCUG00000012722	-	94	72.727	WBGene00011605	sftb-1	82	72.818	Caenorhabditis_elegans
ENSOCUG00000012722	-	96	98.985	ENSCJAG00000003902	SF3B1	83	98.985	Callithrix_jacchus
ENSOCUG00000012722	-	96	98.985	ENSCAFG00000010826	SF3B1	83	98.985	Canis_familiaris
ENSOCUG00000012722	-	96	98.985	ENSCAFG00020004750	SF3B1	83	98.985	Canis_lupus_dingo
ENSOCUG00000012722	-	96	98.893	ENSCHIG00000015226	SF3B1	84	98.893	Capra_hircus
ENSOCUG00000012722	-	96	98.893	ENSTSYG00000009214	SF3B1	83	98.893	Carlito_syrichta
ENSOCUG00000012722	-	96	98.985	ENSCAPG00000006547	SF3B1	83	98.985	Cavia_aperea
ENSOCUG00000012722	-	96	98.985	ENSCPOG00000009353	SF3B1	84	98.985	Cavia_porcellus
ENSOCUG00000012722	-	96	98.985	ENSCCAG00000020506	SF3B1	83	98.985	Cebus_capucinus
ENSOCUG00000012722	-	96	98.985	ENSCATG00000035735	SF3B1	83	98.985	Cercocebus_atys
ENSOCUG00000012722	-	96	98.985	ENSCLAG00000014767	SF3B1	83	98.985	Chinchilla_lanigera
ENSOCUG00000012722	-	96	98.985	ENSCSAG00000011505	SF3B1	83	98.985	Chlorocebus_sabaeus
ENSOCUG00000012722	-	82	96.154	ENSCHOG00000009860	SF3B1	71	96.154	Choloepus_hoffmanni
ENSOCUG00000012722	-	96	98.708	ENSCPBG00000021902	SF3B1	92	98.708	Chrysemys_picta_bellii
ENSOCUG00000012722	-	65	82.267	ENSCING00000002558	-	83	82.267	Ciona_intestinalis
ENSOCUG00000012722	-	96	84.215	ENSCSAVG00000002559	-	91	78.299	Ciona_savignyi
ENSOCUG00000012722	-	96	98.985	ENSCANG00000029415	SF3B1	83	98.985	Colobus_angolensis_palliatus
ENSOCUG00000012722	-	96	98.985	ENSCGRG00001016990	Sf3b1	83	98.985	Cricetulus_griseus_chok1gshd
ENSOCUG00000012722	-	96	98.985	ENSCGRG00000005301	Sf3b1	83	98.985	Cricetulus_griseus_crigri
ENSOCUG00000012722	-	96	91.882	ENSCSEG00000003860	sf3b1	83	91.460	Cynoglossus_semilaevis
ENSOCUG00000012722	-	92	95.861	ENSCVAG00000003680	sf3b1	82	95.861	Cyprinodon_variegatus
ENSOCUG00000012722	-	96	95.692	ENSDARG00000056138	sf3b1	83	95.692	Danio_rerio
ENSOCUG00000012722	-	96	98.985	ENSDNOG00000011754	SF3B1	83	98.985	Dasypus_novemcinctus
ENSOCUG00000012722	-	96	98.985	ENSDORG00000002399	Sf3b1	86	98.985	Dipodomys_ordii
ENSOCUG00000012722	-	96	82.363	FBgn0031266	Sf3b1	82	82.363	Drosophila_melanogaster
ENSOCUG00000012722	-	77	98.041	ENSETEG00000009188	SF3B1	81	98.041	Echinops_telfairi
ENSOCUG00000012722	-	95	91.381	ENSEBUG00000004325	sf3b1	96	91.381	Eptatretus_burgeri
ENSOCUG00000012722	-	96	98.985	ENSEASG00005020159	SF3B1	81	98.985	Equus_asinus_asinus
ENSOCUG00000012722	-	96	98.985	ENSECAG00000021657	SF3B1	81	98.985	Equus_caballus
ENSOCUG00000012722	-	81	100.000	ENSEEUG00000000836	SF3B1	67	100.000	Erinaceus_europaeus
ENSOCUG00000012722	-	96	96.033	ENSELUG00000005977	sf3b1	80	96.033	Esox_lucius
ENSOCUG00000012722	-	96	98.985	ENSFCAG00000005038	SF3B1	83	98.985	Felis_catus
ENSOCUG00000012722	-	96	98.893	ENSFALG00000004281	SF3B1	83	98.893	Ficedula_albicollis
ENSOCUG00000012722	-	96	98.985	ENSFDAG00000017510	SF3B1	83	98.985	Fukomys_damarensis
ENSOCUG00000012722	-	96	95.692	ENSFHEG00000014333	sf3b1	83	95.692	Fundulus_heteroclitus
ENSOCUG00000012722	-	96	95.941	ENSGMOG00000006773	sf3b1	83	95.941	Gadus_morhua
ENSOCUG00000012722	-	96	98.801	ENSGALG00000008038	SF3B1	83	98.801	Gallus_gallus
ENSOCUG00000012722	-	96	95.325	ENSGAFG00000000704	sf3b1	84	95.325	Gambusia_affinis
ENSOCUG00000012722	-	96	96.218	ENSGACG00000008839	sf3b1	83	96.218	Gasterosteus_aculeatus
ENSOCUG00000012722	-	96	98.708	ENSGAGG00000017478	SF3B1	83	98.708	Gopherus_agassizii
ENSOCUG00000012722	-	95	93.530	ENSGGOG00000009264	SF3B1	85	93.530	Gorilla_gorilla
ENSOCUG00000012722	-	96	95.471	ENSHBUG00000007705	sf3b1	82	95.471	Haplochromis_burtoni
ENSOCUG00000012722	-	96	98.985	ENSHGLG00000008285	-	83	98.985	Heterocephalus_glaber_female
ENSOCUG00000012722	-	96	96.587	ENSHGLG00100005535	-	83	96.587	Heterocephalus_glaber_male
ENSOCUG00000012722	-	96	96.218	ENSHCOG00000016775	sf3b1	82	96.218	Hippocampus_comes
ENSOCUG00000012722	-	96	96.402	ENSIPUG00000013171	sf3b1	84	95.967	Ictalurus_punctatus
ENSOCUG00000012722	-	96	98.985	ENSSTOG00000011034	SF3B1	86	98.985	Ictidomys_tridecemlineatus
ENSOCUG00000012722	-	96	98.893	ENSJJAG00000010903	Sf3b1	84	98.893	Jaculus_jaculus
ENSOCUG00000012722	-	96	95.849	ENSKMAG00000004009	sf3b1	82	95.849	Kryptolebias_marmoratus
ENSOCUG00000012722	-	96	95.849	ENSLBEG00000022208	sf3b1	83	95.849	Labrus_bergylta
ENSOCUG00000012722	-	96	93.831	ENSLACG00000014832	SF3B1	82	93.831	Latimeria_chalumnae
ENSOCUG00000012722	-	96	96.596	ENSLOCG00000003899	sf3b1	83	96.596	Lepisosteus_oculatus
ENSOCUG00000012722	-	96	98.985	ENSLAFG00000001956	SF3B1	83	98.985	Loxodonta_africana
ENSOCUG00000012722	-	96	98.985	ENSMMUG00000022430	SF3B1	83	98.985	Macaca_mulatta
ENSOCUG00000012722	-	96	98.985	ENSMNEG00000042333	SF3B1	94	98.985	Macaca_nemestrina
ENSOCUG00000012722	-	95	94.156	ENSMLEG00000026141	SF3B1	88	94.156	Mandrillus_leucophaeus
ENSOCUG00000012722	-	96	95.849	ENSMAMG00000010241	sf3b1	82	95.849	Mastacembelus_armatus
ENSOCUG00000012722	-	96	95.387	ENSMZEG00005021254	sf3b1	82	95.387	Maylandia_zebra
ENSOCUG00000012722	-	96	98.801	ENSMGAG00000007017	SF3B1	84	98.801	Meleagris_gallopavo
ENSOCUG00000012722	-	96	93.911	ENSMAUG00000009071	Sf3b1	82	93.911	Mesocricetus_auratus
ENSOCUG00000012722	-	96	98.893	ENSMICG00000013879	SF3B1	83	98.893	Microcebus_murinus
ENSOCUG00000012722	-	96	93.727	ENSMOCG00000000455	Sf3b1	83	93.727	Microtus_ochrogaster
ENSOCUG00000012722	-	77	95.627	ENSMMOG00000000475	sf3b1	79	95.627	Mola_mola
ENSOCUG00000012722	-	96	98.893	ENSMODG00000012275	SF3B1	83	98.893	Monodelphis_domestica
ENSOCUG00000012722	-	96	95.756	ENSMALG00000017211	sf3b1	82	95.756	Monopterus_albus
ENSOCUG00000012722	-	96	98.985	MGP_CAROLIEiJ_G0014141	Sf3b1	83	98.985	Mus_caroli
ENSOCUG00000012722	-	96	98.985	ENSMUSG00000025982	Sf3b1	83	98.985	Mus_musculus
ENSOCUG00000012722	-	96	98.985	MGP_SPRETEiJ_G0014947	Sf3b1	83	98.985	Mus_spretus
ENSOCUG00000012722	-	96	98.985	ENSMPUG00000007799	SF3B1	83	98.985	Mustela_putorius_furo
ENSOCUG00000012722	-	96	97.601	ENSMLUG00000000840	SF3B1	83	97.601	Myotis_lucifugus
ENSOCUG00000012722	-	96	98.985	ENSNGAG00000021884	-	83	98.985	Nannospalax_galili
ENSOCUG00000012722	-	96	95.387	ENSNBRG00000015816	sf3b1	84	95.387	Neolamprologus_brichardi
ENSOCUG00000012722	-	96	98.985	ENSNLEG00000006861	SF3B1	83	98.985	Nomascus_leucogenys
ENSOCUG00000012722	-	67	100.000	ENSMEUG00000015848	-	58	100.000	Notamacropus_eugenii
ENSOCUG00000012722	-	96	88.100	ENSOPRG00000008596	SF3B1	83	88.100	Ochotona_princeps
ENSOCUG00000012722	-	96	98.985	ENSODEG00000011153	-	83	98.985	Octodon_degus
ENSOCUG00000012722	-	96	95.387	ENSONIG00000013758	sf3b1	82	95.387	Oreochromis_niloticus
ENSOCUG00000012722	-	96	95.417	ENSORLG00000020219	sf3b1	86	95.417	Oryzias_latipes
ENSOCUG00000012722	-	96	95.417	ENSORLG00020001746	sf3b1	86	95.417	Oryzias_latipes_hni
ENSOCUG00000012722	-	54	93.801	ENSORLG00015001759	sf3b1	72	93.801	Oryzias_latipes_hsok
ENSOCUG00000012722	-	96	95.849	ENSOMEG00000019231	sf3b1	82	95.849	Oryzias_melastigma
ENSOCUG00000012722	-	96	98.893	ENSOARG00000015374	SF3B1	83	98.893	Ovis_aries
ENSOCUG00000012722	-	96	98.985	ENSPPAG00000035007	SF3B1	83	98.985	Pan_paniscus
ENSOCUG00000012722	-	96	98.985	ENSPPRG00000009090	SF3B1	83	98.985	Panthera_pardus
ENSOCUG00000012722	-	96	98.985	ENSPTIG00000021557	SF3B1	83	98.985	Panthera_tigris_altaica
ENSOCUG00000012722	-	96	88.777	ENSPTRG00000012771	SF3B1	84	88.777	Pan_troglodytes
ENSOCUG00000012722	-	96	98.985	ENSPANG00000013417	SF3B1	83	98.985	Papio_anubis
ENSOCUG00000012722	-	96	96.313	ENSPKIG00000000784	sf3b1	83	96.313	Paramormyrops_kingsleyae
ENSOCUG00000012722	-	96	98.708	ENSPSIG00000017222	SF3B1	84	98.708	Pelodiscus_sinensis
ENSOCUG00000012722	-	85	96.250	ENSPMGG00000004330	sf3b1	80	96.250	Periophthalmus_magnuspinnatus
ENSOCUG00000012722	-	96	98.985	ENSPEMG00000010699	Sf3b1	84	98.985	Peromyscus_maniculatus_bairdii
ENSOCUG00000012722	-	96	93.192	ENSPMAG00000001311	sf3b1	83	93.192	Petromyzon_marinus
ENSOCUG00000012722	-	96	98.893	ENSPCIG00000010642	SF3B1	83	98.893	Phascolarctos_cinereus
ENSOCUG00000012722	-	96	95.325	ENSPFOG00000000073	sf3b1	83	95.325	Poecilia_formosa
ENSOCUG00000012722	-	96	95.756	ENSPLAG00000002293	sf3b1	82	95.756	Poecilia_latipinna
ENSOCUG00000012722	-	96	95.325	ENSPMEG00000000446	sf3b1	81	95.325	Poecilia_mexicana
ENSOCUG00000012722	-	96	95.849	ENSPREG00000019652	sf3b1	82	95.849	Poecilia_reticulata
ENSOCUG00000012722	-	96	99.168	ENSPPYG00000013044	SF3B1	95	99.168	Pongo_abelii
ENSOCUG00000012722	-	96	98.801	ENSPCAG00000009292	SF3B1	83	98.801	Procavia_capensis
ENSOCUG00000012722	-	96	98.893	ENSPCOG00000024074	SF3B1	83	98.893	Propithecus_coquereli
ENSOCUG00000012722	-	96	98.985	ENSPVAG00000008302	SF3B1	83	98.985	Pteropus_vampyrus
ENSOCUG00000012722	-	96	95.387	ENSPNYG00000014939	sf3b1	82	95.387	Pundamilia_nyererei
ENSOCUG00000012722	-	96	96.494	ENSPNAG00000008288	sf3b1	82	96.494	Pygocentrus_nattereri
ENSOCUG00000012722	-	96	98.985	ENSRNOG00000013516	Sf3b1	83	98.985	Rattus_norvegicus
ENSOCUG00000012722	-	96	94.742	ENSRBIG00000026096	SF3B1	83	94.742	Rhinopithecus_bieti
ENSOCUG00000012722	-	96	98.985	ENSRROG00000031308	SF3B1	83	98.985	Rhinopithecus_roxellana
ENSOCUG00000012722	-	96	98.985	ENSSBOG00000020080	SF3B1	83	98.985	Saimiri_boliviensis_boliviensis
ENSOCUG00000012722	-	96	98.893	ENSSHAG00000017564	SF3B1	83	98.893	Sarcophilus_harrisii
ENSOCUG00000012722	-	96	96.587	ENSSFOG00015021535	sf3b1	82	96.587	Scleropages_formosus
ENSOCUG00000012722	-	95	96.115	ENSSMAG00000013977	sf3b1	81	96.115	Scophthalmus_maximus
ENSOCUG00000012722	-	96	95.941	ENSSDUG00000017422	sf3b1	82	95.941	Seriola_dumerili
ENSOCUG00000012722	-	96	95.941	ENSSLDG00000019495	sf3b1	82	95.941	Seriola_lalandi_dorsalis
ENSOCUG00000012722	-	74	100.000	ENSSARG00000007016	SF3B1	64	100.000	Sorex_araneus
ENSOCUG00000012722	-	96	98.524	ENSSPUG00000000410	SF3B1	86	98.524	Sphenodon_punctatus
ENSOCUG00000012722	-	96	96.218	ENSSPAG00000010451	sf3b1	81	96.218	Stegastes_partitus
ENSOCUG00000012722	-	96	98.985	ENSSSCG00000016075	SF3B1	94	98.985	Sus_scrofa
ENSOCUG00000012722	-	96	98.801	ENSTGUG00000010553	SF3B1	83	98.801	Taeniopygia_guttata
ENSOCUG00000012722	-	97	94.813	ENSTRUG00000015534	sf3b1	83	94.813	Takifugu_rubripes
ENSOCUG00000012722	-	85	98.862	ENSTBEG00000008714	SF3B1	81	98.862	Tupaia_belangeri
ENSOCUG00000012722	-	87	98.964	ENSTTRG00000003414	SF3B1	78	98.964	Tursiops_truncatus
ENSOCUG00000012722	-	89	90.816	ENSUAMG00000018506	SF3B1	80	99.190	Ursus_americanus
ENSOCUG00000012722	-	96	98.985	ENSUMAG00000020945	SF3B1	83	98.985	Ursus_maritimus
ENSOCUG00000012722	-	91	94.341	ENSVPAG00000005798	SF3B1	79	94.341	Vicugna_pacos
ENSOCUG00000012722	-	96	98.985	ENSVVUG00000025948	SF3B1	79	98.985	Vulpes_vulpes
ENSOCUG00000012722	-	96	97.694	ENSXETG00000013339	sf3b1	83	97.694	Xenopus_tropicalis
ENSOCUG00000012722	-	95	92.329	ENSXCOG00000018086	sf3b1	84	92.329	Xiphophorus_couchianus
ENSOCUG00000012722	-	96	95.417	ENSXMAG00000007369	sf3b1	83	95.810	Xiphophorus_maculatus