EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000013042 (Gene tree)
Gene ID: 100344339
Gene Symbol: SMARCA5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 39249 bases
Position: chr15:20840647-20879895
Accession: 100344339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000011238	ResIII	PF04851.15	4.9e-11	1	1
ENSOCUP00000011238	DEAD	PF00270.29	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000013053	SMARCA5-201	4323	XM_002716930	ENSOCUP00000011238	969 (aa)	XP_002716976	G1T4M2

Gene Model

Click here to download ENSOCUG00000013042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000013042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000013042	SMARCA5	51	47.600	ENSOCUG00000026731	HELLS	62	47.600
ENSOCUG00000013042	SMARCA5	60	42.256	ENSOCUG00000009336	CHD1L	63	42.256
ENSOCUG00000013042	SMARCA5	51	44.906	ENSOCUG00000001628	-	50	44.821
ENSOCUG00000013042	SMARCA5	99	85.479	ENSOCUG00000001047	SMARCA1	92	85.479

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000013042	SMARCA5	100	99.587	ENSG00000153147	SMARCA5	92	99.587	Homo_sapiens
ENSOCUG00000013042	SMARCA5	100	99.794	ENSAMEG00000009585	SMARCA5	92	99.794	Ailuropoda_melanoleuca
ENSOCUG00000013042	SMARCA5	98	96.878	ENSAPLG00000009206	SMARCA5	99	96.878	Anas_platyrhynchos
ENSOCUG00000013042	SMARCA5	99	97.110	ENSACAG00000003038	SMARCA5	94	97.110	Anolis_carolinensis
ENSOCUG00000013042	SMARCA5	100	99.587	ENSANAG00000019345	SMARCA5	97	99.587	Aotus_nancymaae
ENSOCUG00000013042	SMARCA5	100	99.794	ENSBTAG00000003399	SMARCA5	92	99.794	Bos_taurus
ENSOCUG00000013042	SMARCA5	100	99.690	ENSCJAG00000002735	SMARCA5	92	99.690	Callithrix_jacchus
ENSOCUG00000013042	SMARCA5	100	99.794	ENSCAFG00000007525	SMARCA5	92	99.794	Canis_familiaris
ENSOCUG00000013042	SMARCA5	98	99.684	ENSCAFG00020025641	SMARCA5	91	99.684	Canis_lupus_dingo
ENSOCUG00000013042	SMARCA5	100	97.936	ENSCHIG00000016375	-	94	97.936	Capra_hircus
ENSOCUG00000013042	SMARCA5	100	99.794	ENSCHIG00000013730	-	92	99.794	Capra_hircus
ENSOCUG00000013042	SMARCA5	100	99.690	ENSTSYG00000009954	SMARCA5	97	99.690	Carlito_syrichta
ENSOCUG00000013042	SMARCA5	99	99.380	ENSCAPG00000013747	SMARCA5	95	99.380	Cavia_aperea
ENSOCUG00000013042	SMARCA5	100	99.690	ENSCPOG00000002259	SMARCA5	92	99.690	Cavia_porcellus
ENSOCUG00000013042	SMARCA5	100	99.690	ENSCCAG00000027215	SMARCA5	97	99.690	Cebus_capucinus
ENSOCUG00000013042	SMARCA5	100	99.587	ENSCATG00000044917	SMARCA5	92	99.587	Cercocebus_atys
ENSOCUG00000013042	SMARCA5	100	99.690	ENSCLAG00000006153	SMARCA5	98	99.690	Chinchilla_lanigera
ENSOCUG00000013042	SMARCA5	100	99.587	ENSCSAG00000003448	SMARCA5	100	99.587	Chlorocebus_sabaeus
ENSOCUG00000013042	SMARCA5	91	98.519	ENSCHOG00000011724	SMARCA5	83	98.519	Choloepus_hoffmanni
ENSOCUG00000013042	SMARCA5	100	98.454	ENSCPBG00000027535	SMARCA5	93	98.454	Chrysemys_picta_bellii
ENSOCUG00000013042	SMARCA5	100	99.587	ENSCANG00000041629	SMARCA5	92	99.587	Colobus_angolensis_palliatus
ENSOCUG00000013042	SMARCA5	100	99.897	ENSCGRG00001012719	Smarca5	92	99.897	Cricetulus_griseus_chok1gshd
ENSOCUG00000013042	SMARCA5	100	99.897	ENSCGRG00000001417	Smarca5	96	99.897	Cricetulus_griseus_crigri
ENSOCUG00000013042	SMARCA5	100	96.904	ENSDNOG00000009158	SMARCA5	92	96.904	Dasypus_novemcinctus
ENSOCUG00000013042	SMARCA5	98	91.034	ENSDORG00000003466	Smarca5	97	91.034	Dipodomys_ordii
ENSOCUG00000013042	SMARCA5	99	85.640	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSOCUG00000013042	SMARCA5	100	99.794	ENSEASG00005001866	SMARCA5	98	99.636	Equus_asinus_asinus
ENSOCUG00000013042	SMARCA5	100	99.794	ENSECAG00000002676	SMARCA5	92	99.794	Equus_caballus
ENSOCUG00000013042	SMARCA5	100	95.253	ENSEEUG00000013176	SMARCA5	98	95.253	Erinaceus_europaeus
ENSOCUG00000013042	SMARCA5	99	89.175	ENSELUG00000014653	SMARCA5	99	89.175	Esox_lucius
ENSOCUG00000013042	SMARCA5	100	99.794	ENSFCAG00000004544	SMARCA5	92	99.794	Felis_catus
ENSOCUG00000013042	SMARCA5	100	97.423	ENSFALG00000004987	SMARCA5	100	97.423	Ficedula_albicollis
ENSOCUG00000013042	SMARCA5	100	99.897	ENSFDAG00000021016	SMARCA5	98	99.897	Fukomys_damarensis
ENSOCUG00000013042	SMARCA5	99	89.474	ENSGMOG00000007519	SMARCA5	94	89.474	Gadus_morhua
ENSOCUG00000013042	SMARCA5	100	98.041	ENSGALG00000009913	SMARCA5	93	98.041	Gallus_gallus
ENSOCUG00000013042	SMARCA5	99	90.815	ENSGACG00000017238	SMARCA5	94	90.815	Gasterosteus_aculeatus
ENSOCUG00000013042	SMARCA5	100	98.557	ENSGAGG00000019882	SMARCA5	93	98.557	Gopherus_agassizii
ENSOCUG00000013042	SMARCA5	100	99.587	ENSGGOG00000012595	SMARCA5	97	99.587	Gorilla_gorilla
ENSOCUG00000013042	SMARCA5	100	90.093	ENSHGLG00000000317	-	92	90.093	Heterocephalus_glaber_female
ENSOCUG00000013042	SMARCA5	100	99.794	ENSHGLG00000000816	-	92	99.794	Heterocephalus_glaber_female
ENSOCUG00000013042	SMARCA5	100	99.794	ENSHGLG00100018421	-	98	99.794	Heterocephalus_glaber_male
ENSOCUG00000013042	SMARCA5	100	99.897	ENSSTOG00000010683	SMARCA5	92	99.897	Ictidomys_tridecemlineatus
ENSOCUG00000013042	SMARCA5	100	99.587	ENSJJAG00000014965	Smarca5	92	99.587	Jaculus_jaculus
ENSOCUG00000013042	SMARCA5	100	96.598	ENSLACG00000007091	SMARCA5	95	96.598	Latimeria_chalumnae
ENSOCUG00000013042	SMARCA5	100	92.784	ENSLOCG00000008966	SMARCA5	95	92.784	Lepisosteus_oculatus
ENSOCUG00000013042	SMARCA5	100	99.794	ENSLAFG00000007795	SMARCA5	92	99.794	Loxodonta_africana
ENSOCUG00000013042	SMARCA5	100	99.587	ENSMFAG00000043649	SMARCA5	92	99.587	Macaca_fascicularis
ENSOCUG00000013042	SMARCA5	100	99.587	ENSMMUG00000000829	SMARCA5	97	99.473	Macaca_mulatta
ENSOCUG00000013042	SMARCA5	100	99.587	ENSMNEG00000031916	SMARCA5	92	99.587	Macaca_nemestrina
ENSOCUG00000013042	SMARCA5	100	99.587	ENSMLEG00000042393	SMARCA5	92	99.587	Mandrillus_leucophaeus
ENSOCUG00000013042	SMARCA5	100	98.041	ENSMGAG00000003517	SMARCA5	96	98.041	Meleagris_gallopavo
ENSOCUG00000013042	SMARCA5	100	99.897	ENSMAUG00000015902	Smarca5	95	99.897	Mesocricetus_auratus
ENSOCUG00000013042	SMARCA5	100	99.690	ENSMICG00000003971	SMARCA5	98	98.051	Microcebus_murinus
ENSOCUG00000013042	SMARCA5	100	99.587	ENSMOCG00000016986	-	92	99.587	Microtus_ochrogaster
ENSOCUG00000013042	SMARCA5	100	99.278	ENSMODG00000000391	SMARCA5	92	99.278	Monodelphis_domestica
ENSOCUG00000013042	SMARCA5	100	99.794	ENSMUSG00000031715	Smarca5	92	99.794	Mus_musculus
ENSOCUG00000013042	SMARCA5	100	99.897	MGP_PahariEiJ_G0022862	Smarca5	92	99.897	Mus_pahari
ENSOCUG00000013042	SMARCA5	100	99.897	ENSMLUG00000000468	SMARCA5	92	99.897	Myotis_lucifugus
ENSOCUG00000013042	SMARCA5	100	99.897	ENSNGAG00000000441	Smarca5	92	99.897	Nannospalax_galili
ENSOCUG00000013042	SMARCA5	100	99.587	ENSNLEG00000005383	SMARCA5	92	99.587	Nomascus_leucogenys
ENSOCUG00000013042	SMARCA5	99	91.426	ENSMEUG00000001267	SMARCA5	100	91.426	Notamacropus_eugenii
ENSOCUG00000013042	SMARCA5	90	98.429	ENSOPRG00000014427	SMARCA5	84	98.429	Ochotona_princeps
ENSOCUG00000013042	SMARCA5	100	99.174	ENSOANG00000013921	SMARCA5	100	99.174	Ornithorhynchus_anatinus
ENSOCUG00000013042	SMARCA5	100	99.690	ENSOGAG00000009702	SMARCA5	92	99.690	Otolemur_garnettii
ENSOCUG00000013042	SMARCA5	99	99.587	ENSOARG00000010589	SMARCA5	92	99.587	Ovis_aries
ENSOCUG00000013042	SMARCA5	100	99.484	ENSPPAG00000028523	SMARCA5	97	99.484	Pan_paniscus
ENSOCUG00000013042	SMARCA5	100	93.705	ENSPPRG00000004925	SMARCA5	92	94.634	Panthera_pardus
ENSOCUG00000013042	SMARCA5	100	99.794	ENSPTIG00000020959	SMARCA5	93	99.794	Panthera_tigris_altaica
ENSOCUG00000013042	SMARCA5	100	99.587	ENSPTRG00000016472	SMARCA5	97	99.587	Pan_troglodytes
ENSOCUG00000013042	SMARCA5	100	99.587	ENSPANG00000001175	SMARCA5	92	99.587	Papio_anubis
ENSOCUG00000013042	SMARCA5	100	91.237	ENSPKIG00000015885	SMARCA5	100	91.237	Paramormyrops_kingsleyae
ENSOCUG00000013042	SMARCA5	100	90.825	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSOCUG00000013042	SMARCA5	100	96.186	ENSPSIG00000004177	SMARCA5	97	96.186	Pelodiscus_sinensis
ENSOCUG00000013042	SMARCA5	99	89.918	ENSPMGG00000012316	SMARCA5	100	89.918	Periophthalmus_magnuspinnatus
ENSOCUG00000013042	SMARCA5	100	99.897	ENSPEMG00000008060	Smarca5	95	99.897	Peromyscus_maniculatus_bairdii
ENSOCUG00000013042	SMARCA5	65	87.281	ENSPMAG00000008026	SMARCA5	98	87.281	Petromyzon_marinus
ENSOCUG00000013042	SMARCA5	100	71.004	ENSPMAG00000006011	SMARCA5	79	86.777	Petromyzon_marinus
ENSOCUG00000013042	SMARCA5	100	99.278	ENSPCIG00000003926	SMARCA5	92	99.278	Phascolarctos_cinereus
ENSOCUG00000013042	SMARCA5	100	99.587	ENSPPYG00000015091	SMARCA5	92	99.587	Pongo_abelii
ENSOCUG00000013042	SMARCA5	86	95.667	ENSPCAG00000014230	SMARCA5	83	95.667	Procavia_capensis
ENSOCUG00000013042	SMARCA5	100	96.698	ENSPCOG00000026744	SMARCA5	97	96.087	Propithecus_coquereli
ENSOCUG00000013042	SMARCA5	100	99.690	ENSPVAG00000006482	SMARCA5	92	99.690	Pteropus_vampyrus
ENSOCUG00000013042	SMARCA5	100	91.237	ENSPNAG00000027824	SMARCA5	96	91.456	Pygocentrus_nattereri
ENSOCUG00000013042	SMARCA5	100	99.794	ENSRNOG00000018149	Smarca5	97	99.794	Rattus_norvegicus
ENSOCUG00000013042	SMARCA5	100	99.587	ENSRBIG00000044644	SMARCA5	92	99.587	Rhinopithecus_bieti
ENSOCUG00000013042	SMARCA5	100	99.587	ENSRROG00000029591	SMARCA5	97	99.587	Rhinopithecus_roxellana
ENSOCUG00000013042	SMARCA5	100	99.690	ENSSBOG00000036257	SMARCA5	92	99.690	Saimiri_boliviensis_boliviensis
ENSOCUG00000013042	SMARCA5	100	99.278	ENSSHAG00000008464	SMARCA5	98	99.278	Sarcophilus_harrisii
ENSOCUG00000013042	SMARCA5	100	91.443	ENSSFOG00015013252	SMARCA5	94	91.443	Scleropages_formosus
ENSOCUG00000013042	SMARCA5	100	96.598	ENSSPUG00000007604	SMARCA5	97	96.598	Sphenodon_punctatus
ENSOCUG00000013042	SMARCA5	100	99.794	ENSSSCG00000009047	SMARCA5	92	99.794	Sus_scrofa
ENSOCUG00000013042	SMARCA5	100	97.320	ENSTGUG00000002408	SMARCA5	96	97.320	Taeniopygia_guttata
ENSOCUG00000013042	SMARCA5	98	99.684	ENSUAMG00000023495	SMARCA5	91	99.684	Ursus_americanus
ENSOCUG00000013042	SMARCA5	100	99.794	ENSUMAG00000015324	SMARCA5	94	99.794	Ursus_maritimus
ENSOCUG00000013042	SMARCA5	100	99.484	ENSVPAG00000008982	SMARCA5	92	99.484	Vicugna_pacos
ENSOCUG00000013042	SMARCA5	100	99.794	ENSVVUG00000017473	SMARCA5	92	99.794	Vulpes_vulpes
ENSOCUG00000013042	SMARCA5	94	94.656	ENSXETG00000017566	smarca5	92	94.656	Xenopus_tropicalis