EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000013066 (Gene tree)
Gene ID: 100350476
Gene Symbol: LARP1
Alias: -
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 63164 bases
Position: chr3:36131348-36194511
Accession: 100350476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000026656	La	PF05383.17	6e-21	1	1
ENSOCUP00000011252	La	PF05383.17	6.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000013069	LARP1-202	3264	XM_002710333	ENSOCUP00000011252	1080 (aa)	XP_002710379	G1T4N4
ENSOCUT00000033611	LARP1-201	3315	-	ENSOCUP00000026656	1066 (aa)	-	U3KN47

Gene Model

Click here to download ENSOCUG00000013066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000013066's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000013066	LARP1	85	58.874	ENSOCUG00000013330	LARP1B	98	58.999

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000013066	LARP1	95	92.502	ENSG00000155506	LARP1	100	96.906	Homo_sapiens
ENSOCUG00000013066	LARP1	88	81.938	ENSAPOG00000020685	larp1	99	81.498	Acanthochromis_polyacanthus
ENSOCUG00000013066	LARP1	89	97.701	ENSAMEG00000016673	LARP1	100	97.701	Ailuropoda_melanoleuca
ENSOCUG00000013066	LARP1	99	62.208	ENSACIG00000012994	larp1	94	75.203	Amphilophus_citrinellus
ENSOCUG00000013066	LARP1	75	70.987	ENSAOCG00000007792	larp1	97	71.106	Amphiprion_ocellaris
ENSOCUG00000013066	LARP1	97	65.177	ENSAPEG00000022246	larp1	97	65.088	Amphiprion_percula
ENSOCUG00000013066	LARP1	97	62.918	ENSATEG00000013523	larp1	98	62.579	Anabas_testudineus
ENSOCUG00000013066	LARP1	82	84.529	ENSAPLG00000007559	LARP1	99	84.529	Anas_platyrhynchos
ENSOCUG00000013066	LARP1	89	80.470	ENSACAG00000004071	LARP1	100	80.022	Anolis_carolinensis
ENSOCUG00000013066	LARP1	90	96.898	ENSANAG00000029949	LARP1	100	93.763	Aotus_nancymaae
ENSOCUG00000013066	LARP1	92	75.067	ENSACLG00000015256	larp1	92	74.731	Astatotilapia_calliptera
ENSOCUG00000013066	LARP1	96	65.909	ENSAMXG00000000859	larp1	98	65.504	Astyanax_mexicanus
ENSOCUG00000013066	LARP1	100	93.188	ENSBTAG00000008443	LARP1	100	93.551	Bos_taurus
ENSOCUG00000013066	LARP1	100	94.727	ENSCJAG00000004454	LARP1	100	94.727	Callithrix_jacchus
ENSOCUG00000013066	LARP1	88	98.113	ENSCAFG00000017639	LARP1	99	98.113	Canis_familiaris
ENSOCUG00000013066	LARP1	83	98.212	ENSCAFG00020023860	LARP1	100	98.212	Canis_lupus_dingo
ENSOCUG00000013066	LARP1	100	93.266	ENSCHIG00000014414	LARP1	100	93.161	Capra_hircus
ENSOCUG00000013066	LARP1	88	96.440	ENSTSYG00000013732	LARP1	99	96.312	Carlito_syrichta
ENSOCUG00000013066	LARP1	78	95.035	ENSCAPG00000013865	LARP1	87	95.035	Cavia_aperea
ENSOCUG00000013066	LARP1	88	97.275	ENSCPOG00000003377	LARP1	100	97.275	Cavia_porcellus
ENSOCUG00000013066	LARP1	100	94.823	ENSCCAG00000025201	LARP1	100	94.823	Cebus_capucinus
ENSOCUG00000013066	LARP1	100	96.064	ENSCATG00000030675	LARP1	100	95.501	Cercocebus_atys
ENSOCUG00000013066	LARP1	88	97.487	ENSCLAG00000012755	LARP1	99	96.667	Chinchilla_lanigera
ENSOCUG00000013066	LARP1	81	97.100	ENSCSAG00000010800	LARP1	100	97.100	Chlorocebus_sabaeus
ENSOCUG00000013066	LARP1	84	92.609	ENSCHOG00000012716	LARP1	92	92.511	Choloepus_hoffmanni
ENSOCUG00000013066	LARP1	97	77.428	ENSCPBG00000002173	LARP1	99	77.458	Chrysemys_picta_bellii
ENSOCUG00000013066	LARP1	90	96.381	ENSCANG00000037418	LARP1	94	95.760	Colobus_angolensis_palliatus
ENSOCUG00000013066	LARP1	100	92.791	ENSCGRG00001016913	Larp1	100	92.699	Cricetulus_griseus_chok1gshd
ENSOCUG00000013066	LARP1	85	91.404	ENSCGRG00000009916	Larp1	99	91.730	Cricetulus_griseus_crigri
ENSOCUG00000013066	LARP1	99	63.399	ENSCSEG00000016431	larp1	99	63.612	Cynoglossus_semilaevis
ENSOCUG00000013066	LARP1	99	63.826	ENSCVAG00000022687	larp1	98	63.743	Cyprinodon_variegatus
ENSOCUG00000013066	LARP1	91	65.559	ENSDARG00000101722	larp1	95	65.720	Danio_rerio
ENSOCUG00000013066	LARP1	100	92.572	ENSDNOG00000012073	LARP1	100	92.754	Dasypus_novemcinctus
ENSOCUG00000013066	LARP1	86	97.505	ENSDORG00000002897	Larp1	99	97.505	Dipodomys_ordii
ENSOCUG00000013066	LARP1	81	96.705	ENSETEG00000020251	LARP1	100	96.705	Echinops_telfairi
ENSOCUG00000013066	LARP1	100	95.277	ENSEASG00005001070	LARP1	100	95.277	Equus_asinus_asinus
ENSOCUG00000013066	LARP1	100	95.277	ENSECAG00000017002	LARP1	79	95.277	Equus_caballus
ENSOCUG00000013066	LARP1	86	91.328	ENSEEUG00000001065	LARP1	100	91.328	Erinaceus_europaeus
ENSOCUG00000013066	LARP1	99	63.234	ENSELUG00000019403	larp1	99	63.891	Esox_lucius
ENSOCUG00000013066	LARP1	100	95.463	ENSFCAG00000000592	LARP1	100	95.463	Felis_catus
ENSOCUG00000013066	LARP1	77	81.257	ENSFALG00000008335	LARP1	99	81.613	Ficedula_albicollis
ENSOCUG00000013066	LARP1	88	97.275	ENSFDAG00000021125	LARP1	100	97.275	Fukomys_damarensis
ENSOCUG00000013066	LARP1	64	53.955	ENSFHEG00000020307	larp1	92	63.743	Fundulus_heteroclitus
ENSOCUG00000013066	LARP1	100	79.190	ENSGALG00000040109	LARP1	100	79.098	Gallus_gallus
ENSOCUG00000013066	LARP1	100	77.260	ENSGAGG00000025113	LARP1	99	81.332	Gopherus_agassizii
ENSOCUG00000013066	LARP1	90	96.277	ENSGGOG00000006048	LARP1	94	95.657	Gorilla_gorilla
ENSOCUG00000013066	LARP1	99	64.472	ENSHBUG00000020762	larp1	97	69.040	Haplochromis_burtoni
ENSOCUG00000013066	LARP1	100	93.394	ENSHGLG00000006267	LARP1	100	93.119	Heterocephalus_glaber_female
ENSOCUG00000013066	LARP1	97	77.165	ENSHGLG00100003395	-	97	77.048	Heterocephalus_glaber_male
ENSOCUG00000013066	LARP1	88	97.065	ENSHGLG00100014230	-	100	97.065	Heterocephalus_glaber_male
ENSOCUG00000013066	LARP1	92	79.108	ENSHCOG00000010786	larp1	99	78.873	Hippocampus_comes
ENSOCUG00000013066	LARP1	97	62.488	ENSIPUG00000019105	Larp1	98	62.406	Ictalurus_punctatus
ENSOCUG00000013066	LARP1	86	98.156	ENSSTOG00000005678	LARP1	99	98.156	Ictidomys_tridecemlineatus
ENSOCUG00000013066	LARP1	100	88.704	ENSJJAG00000016950	Larp1	100	89.167	Jaculus_jaculus
ENSOCUG00000013066	LARP1	91	76.826	ENSKMAG00000018468	larp1	96	68.144	Kryptolebias_marmoratus
ENSOCUG00000013066	LARP1	99	63.586	ENSLBEG00000027172	larp1	98	63.636	Labrus_bergylta
ENSOCUG00000013066	LARP1	94	70.854	ENSLOCG00000012457	larp1	99	71.050	Lepisosteus_oculatus
ENSOCUG00000013066	LARP1	100	93.796	ENSLAFG00000008991	LARP1	100	93.796	Loxodonta_africana
ENSOCUG00000013066	LARP1	89	96.555	ENSMFAG00000031651	LARP1	94	95.929	Macaca_fascicularis
ENSOCUG00000013066	LARP1	87	96.533	ENSMMUG00000009411	LARP1	99	96.533	Macaca_mulatta
ENSOCUG00000013066	LARP1	86	95.887	ENSMNEG00000039294	LARP1	100	96.648	Macaca_nemestrina
ENSOCUG00000013066	LARP1	89	97.077	ENSMLEG00000035142	LARP1	94	96.451	Mandrillus_leucophaeus
ENSOCUG00000013066	LARP1	99	63.879	ENSMAMG00000021788	larp1	99	63.968	Mastacembelus_armatus
ENSOCUG00000013066	LARP1	99	64.183	ENSMZEG00005009345	larp1	98	67.538	Maylandia_zebra
ENSOCUG00000013066	LARP1	88	81.115	ENSMGAG00000005696	LARP1	100	81.115	Meleagris_gallopavo
ENSOCUG00000013066	LARP1	100	92.606	ENSMAUG00000001385	Larp1	100	92.514	Mesocricetus_auratus
ENSOCUG00000013066	LARP1	89	96.258	ENSMICG00000000837	LARP1	99	97.763	Microcebus_murinus
ENSOCUG00000013066	LARP1	100	92.791	ENSMOCG00000008920	Larp1	100	92.699	Microtus_ochrogaster
ENSOCUG00000013066	LARP1	86	59.259	ENSMMOG00000013364	larp1	95	53.412	Mola_mola
ENSOCUG00000013066	LARP1	89	83.523	ENSMODG00000008663	LARP1	99	83.506	Monodelphis_domestica
ENSOCUG00000013066	LARP1	99	63.978	ENSMALG00000017180	larp1	95	69.977	Monopterus_albus
ENSOCUG00000013066	LARP1	100	92.699	MGP_CAROLIEiJ_G0016383	Larp1	100	92.791	Mus_caroli
ENSOCUG00000013066	LARP1	100	92.699	ENSMUSG00000037331	Larp1	100	92.791	Mus_musculus
ENSOCUG00000013066	LARP1	100	92.541	MGP_PahariEiJ_G0017518	Larp1	100	92.798	Mus_pahari
ENSOCUG00000013066	LARP1	100	92.791	MGP_SPRETEiJ_G0017225	Larp1	100	92.884	Mus_spretus
ENSOCUG00000013066	LARP1	82	95.028	ENSMPUG00000013564	LARP1	99	95.028	Mustela_putorius_furo
ENSOCUG00000013066	LARP1	88	93.501	ENSMLUG00000002608	LARP1	100	93.501	Myotis_lucifugus
ENSOCUG00000013066	LARP1	87	95.125	ENSNGAG00000001098	Larp1	99	95.125	Nannospalax_galili
ENSOCUG00000013066	LARP1	88	67.979	ENSNBRG00000008963	larp1	94	67.872	Neolamprologus_brichardi
ENSOCUG00000013066	LARP1	95	89.571	ENSNLEG00000016588	LARP1	99	94.048	Nomascus_leucogenys
ENSOCUG00000013066	LARP1	88	77.149	ENSMEUG00000002957	LARP1	100	77.358	Notamacropus_eugenii
ENSOCUG00000013066	LARP1	88	97.799	ENSOPRG00000013014	LARP1	100	97.799	Ochotona_princeps
ENSOCUG00000013066	LARP1	90	95.979	ENSODEG00000010824	LARP1	100	97.170	Octodon_degus
ENSOCUG00000013066	LARP1	99	65.511	ENSONIG00000017308	larp1	99	65.608	Oreochromis_niloticus
ENSOCUG00000013066	LARP1	91	81.727	ENSOANG00000005096	LARP1	100	82.247	Ornithorhynchus_anatinus
ENSOCUG00000013066	LARP1	97	63.645	ENSORLG00000000824	larp1	96	71.376	Oryzias_latipes
ENSOCUG00000013066	LARP1	97	63.873	ENSORLG00020022241	larp1	97	64.372	Oryzias_latipes_hni
ENSOCUG00000013066	LARP1	97	62.396	ENSORLG00015007538	larp1	97	62.953	Oryzias_latipes_hsok
ENSOCUG00000013066	LARP1	97	62.849	ENSOMEG00000003134	larp1	97	63.138	Oryzias_melastigma
ENSOCUG00000013066	LARP1	88	97.379	ENSOGAG00000016750	LARP1	100	97.379	Otolemur_garnettii
ENSOCUG00000013066	LARP1	88	94.450	ENSOARG00000009893	LARP1	99	94.450	Ovis_aries
ENSOCUG00000013066	LARP1	90	96.381	ENSPPAG00000042993	LARP1	94	95.760	Pan_paniscus
ENSOCUG00000013066	LARP1	90	95.366	ENSPPRG00000009780	LARP1	96	95.366	Panthera_pardus
ENSOCUG00000013066	LARP1	90	95.572	ENSPTIG00000007013	LARP1	96	95.572	Panthera_tigris_altaica
ENSOCUG00000013066	LARP1	100	95.876	ENSPTRG00000017447	LARP1	100	95.314	Pan_troglodytes
ENSOCUG00000013066	LARP1	100	96.064	ENSPANG00000008080	LARP1	100	95.501	Papio_anubis
ENSOCUG00000013066	LARP1	99	60.938	ENSPKIG00000017153	-	99	62.427	Paramormyrops_kingsleyae
ENSOCUG00000013066	LARP1	96	66.855	ENSPKIG00000010096	larp1	99	66.209	Paramormyrops_kingsleyae
ENSOCUG00000013066	LARP1	94	63.369	ENSPMGG00000011599	larp1	97	64.120	Periophthalmus_magnuspinnatus
ENSOCUG00000013066	LARP1	86	96.529	ENSPEMG00000022523	Larp1	99	96.529	Peromyscus_maniculatus_bairdii
ENSOCUG00000013066	LARP1	98	80.522	ENSPCIG00000019242	LARP1	90	80.522	Phascolarctos_cinereus
ENSOCUG00000013066	LARP1	97	63.836	ENSPFOG00000005836	larp1	99	62.811	Poecilia_formosa
ENSOCUG00000013066	LARP1	97	64.597	ENSPLAG00000008936	larp1	99	63.186	Poecilia_latipinna
ENSOCUG00000013066	LARP1	97	64.384	ENSPMEG00000013656	larp1	99	63.167	Poecilia_mexicana
ENSOCUG00000013066	LARP1	86	68.196	ENSPREG00000005726	larp1	98	66.835	Poecilia_reticulata
ENSOCUG00000013066	LARP1	88	91.614	ENSPCAG00000006407	LARP1	100	91.614	Procavia_capensis
ENSOCUG00000013066	LARP1	88	89.518	ENSPCOG00000016949	LARP1	100	93.082	Propithecus_coquereli
ENSOCUG00000013066	LARP1	100	94.203	ENSPVAG00000002262	LARP1	100	94.203	Pteropus_vampyrus
ENSOCUG00000013066	LARP1	99	64.004	ENSPNYG00000007938	larp1	98	67.437	Pundamilia_nyererei
ENSOCUG00000013066	LARP1	99	65.709	ENSPNAG00000021427	larp1	92	69.473	Pygocentrus_nattereri
ENSOCUG00000013066	LARP1	87	97.075	ENSRNOG00000031544	Larp1	99	97.075	Rattus_norvegicus
ENSOCUG00000013066	LARP1	95	92.195	ENSRBIG00000038005	LARP1	96	94.297	Rhinopithecus_bieti
ENSOCUG00000013066	LARP1	95	92.098	ENSRROG00000034073	LARP1	100	96.760	Rhinopithecus_roxellana
ENSOCUG00000013066	LARP1	91	94.864	ENSSBOG00000019816	LARP1	100	97.294	Saimiri_boliviensis_boliviensis
ENSOCUG00000013066	LARP1	89	84.969	ENSSHAG00000011115	LARP1	100	84.969	Sarcophilus_harrisii
ENSOCUG00000013066	LARP1	99	64.457	ENSSFOG00015018058	-	99	64.940	Scleropages_formosus
ENSOCUG00000013066	LARP1	92	65.304	ENSSFOG00015020304	larp1	93	67.719	Scleropages_formosus
ENSOCUG00000013066	LARP1	94	62.633	ENSSMAG00000007468	larp1	98	62.909	Scophthalmus_maximus
ENSOCUG00000013066	LARP1	99	63.316	ENSSDUG00000000268	larp1	97	69.775	Seriola_dumerili
ENSOCUG00000013066	LARP1	81	69.257	ENSSLDG00000016505	larp1	97	69.101	Seriola_lalandi_dorsalis
ENSOCUG00000013066	LARP1	57	92.933	ENSSARG00000013907	-	89	94.172	Sorex_araneus
ENSOCUG00000013066	LARP1	100	75.621	ENSSPUG00000012179	-	100	76.110	Sphenodon_punctatus
ENSOCUG00000013066	LARP1	99	64.279	ENSSPAG00000003910	larp1	99	63.936	Stegastes_partitus
ENSOCUG00000013066	LARP1	100	94.918	ENSSSCG00000017069	LARP1	100	97.210	Sus_scrofa
ENSOCUG00000013066	LARP1	85	83.769	ENSTGUG00000000704	LARP1	100	83.769	Taeniopygia_guttata
ENSOCUG00000013066	LARP1	99	62.455	ENSTRUG00000009470	larp1	99	62.873	Takifugu_rubripes
ENSOCUG00000013066	LARP1	82	95.480	ENSTBEG00000003381	LARP1	100	95.480	Tupaia_belangeri
ENSOCUG00000013066	LARP1	88	97.379	ENSTTRG00000015934	LARP1	100	97.379	Tursiops_truncatus
ENSOCUG00000013066	LARP1	100	95.554	ENSUAMG00000019334	LARP1	100	95.554	Ursus_americanus
ENSOCUG00000013066	LARP1	85	97.677	ENSUMAG00000002934	LARP1	99	96.533	Ursus_maritimus
ENSOCUG00000013066	LARP1	83	98.212	ENSVVUG00000004644	LARP1	100	98.212	Vulpes_vulpes
ENSOCUG00000013066	LARP1	92	75.074	ENSXETG00000008413	larp1	94	75.527	Xenopus_tropicalis
ENSOCUG00000013066	LARP1	85	74.069	ENSXCOG00000004022	larp1	95	73.931	Xiphophorus_couchianus
ENSOCUG00000013066	LARP1	97	64.077	ENSXMAG00000018780	larp1	97	63.587	Xiphophorus_maculatus