EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000013171 (Gene tree)
Gene ID: 100339971
Gene Symbol: -
Alias: -
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 5107 bases
Position: chr3:56901638-56906744
Accession: 100339971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000011339	Nop16	PF09420.10	1.3e-22	1	2
ENSOCUP00000011339	Nop16	PF09420.10	1.3e-22	2	2
ENSOCUP00000021908	Nop16	PF09420.10	8.1e-22	1	2
ENSOCUP00000021908	Nop16	PF09420.10	8.1e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000027696	-	540	-	ENSOCUP00000021908	179 (aa)	-	G1TXV3
ENSOCUT00000013169	-	534	XM_002710440	ENSOCUP00000011339	178 (aa)	XP_002710486	G1T4W0

Gene Model

Click here to download ENSOCUG00000013171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000013171's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000013171	-	96	53.529	ENSAPOG00000010682	-	96	53.529	Acanthochromis_polyacanthus
ENSOCUG00000013171	-	100	93.820	ENSAMEG00000006988	-	100	93.820	Ailuropoda_melanoleuca
ENSOCUG00000013171	-	96	54.706	ENSACIG00000019263	nop16	95	54.706	Amphilophus_citrinellus
ENSOCUG00000013171	-	96	54.118	ENSAOCG00000005504	nop16	96	54.118	Amphiprion_ocellaris
ENSOCUG00000013171	-	96	54.118	ENSAPEG00000006605	nop16	96	54.118	Amphiprion_percula
ENSOCUG00000013171	-	96	55.882	ENSATEG00000014089	nop16	95	55.882	Anabas_testudineus
ENSOCUG00000013171	-	99	69.886	ENSACAG00000006333	-	99	69.886	Anolis_carolinensis
ENSOCUG00000013171	-	100	82.584	ENSANAG00000027410	-	100	82.584	Aotus_nancymaae
ENSOCUG00000013171	-	100	88.764	ENSANAG00000015743	-	100	88.764	Aotus_nancymaae
ENSOCUG00000013171	-	96	54.386	ENSACLG00000025227	nop16	95	54.386	Astatotilapia_calliptera
ENSOCUG00000013171	-	94	44.311	ENSAMXG00000006843	nop16	95	44.311	Astyanax_mexicanus
ENSOCUG00000013171	-	100	91.011	ENSBTAG00000010734	NOP16	100	91.011	Bos_taurus
ENSOCUG00000013171	-	66	32.374	WBGene00013958	ZK265.6	80	30.625	Caenorhabditis_elegans
ENSOCUG00000013171	-	100	92.135	ENSCAFG00000016694	NOP16	100	92.135	Canis_familiaris
ENSOCUG00000013171	-	99	92.045	ENSCAFG00020011505	-	94	92.045	Canis_lupus_dingo
ENSOCUG00000013171	-	100	91.011	ENSCHIG00000022082	-	100	91.011	Capra_hircus
ENSOCUG00000013171	-	100	75.281	ENSTSYG00000032690	-	100	75.281	Carlito_syrichta
ENSOCUG00000013171	-	99	92.090	ENSTSYG00000030409	-	99	92.090	Carlito_syrichta
ENSOCUG00000013171	-	100	90.449	ENSCPOG00000026072	-	100	90.449	Cavia_porcellus
ENSOCUG00000013171	-	94	84.431	ENSCCAG00000026775	-	97	84.431	Cebus_capucinus
ENSOCUG00000013171	-	100	91.011	ENSCLAG00000015405	-	100	91.011	Chinchilla_lanigera
ENSOCUG00000013171	-	100	92.135	ENSCSAG00000009400	-	100	92.135	Chlorocebus_sabaeus
ENSOCUG00000013171	-	99	74.719	ENSCPBG00000022647	-	99	74.719	Chrysemys_picta_bellii
ENSOCUG00000013171	-	99	42.473	ENSCING00000006179	-	100	42.473	Ciona_intestinalis
ENSOCUG00000013171	-	95	42.353	ENSCSAVG00000000269	-	93	42.353	Ciona_savignyi
ENSOCUG00000013171	-	100	88.764	ENSCGRG00001004259	Nop16	100	88.764	Cricetulus_griseus_chok1gshd
ENSOCUG00000013171	-	100	88.764	ENSCGRG00000010975	Nop16	100	88.764	Cricetulus_griseus_crigri
ENSOCUG00000013171	-	96	51.176	ENSCSEG00000020523	nop16	97	51.176	Cynoglossus_semilaevis
ENSOCUG00000013171	-	96	53.529	ENSCVAG00000020140	nop16	95	53.529	Cyprinodon_variegatus
ENSOCUG00000013171	-	98	50.286	ENSDARG00000044402	nop16	99	50.286	Danio_rerio
ENSOCUG00000013171	-	100	91.573	ENSDNOG00000042890	-	100	91.573	Dasypus_novemcinctus
ENSOCUG00000013171	-	100	88.764	ENSDORG00000008872	Nop16	100	88.764	Dipodomys_ordii
ENSOCUG00000013171	-	93	42.775	ENSEBUG00000011196	nop16	95	42.775	Eptatretus_burgeri
ENSOCUG00000013171	-	100	92.697	ENSEASG00005011988	-	100	92.697	Equus_asinus_asinus
ENSOCUG00000013171	-	100	93.820	ENSECAG00000021354	NOP16	100	93.820	Equus_caballus
ENSOCUG00000013171	-	96	55.556	ENSELUG00000000401	nop16	95	55.556	Esox_lucius
ENSOCUG00000013171	-	100	93.258	ENSFCAG00000025473	-	100	93.258	Felis_catus
ENSOCUG00000013171	-	100	68.333	ENSFALG00000008553	-	100	68.333	Ficedula_albicollis
ENSOCUG00000013171	-	100	91.011	ENSFDAG00000000193	-	100	91.011	Fukomys_damarensis
ENSOCUG00000013171	-	96	55.294	ENSFHEG00000016452	nop16	95	55.294	Fundulus_heteroclitus
ENSOCUG00000013171	-	100	72.778	ENSGALG00000003355	-	100	72.778	Gallus_gallus
ENSOCUG00000013171	-	83	53.741	ENSGAFG00000011616	nop16	79	53.741	Gambusia_affinis
ENSOCUG00000013171	-	96	51.445	ENSGACG00000003122	-	97	56.522	Gasterosteus_aculeatus
ENSOCUG00000013171	-	96	48.235	ENSGACG00000020810	nop16	100	48.235	Gasterosteus_aculeatus
ENSOCUG00000013171	-	96	52.353	ENSGACG00000020819	-	98	52.353	Gasterosteus_aculeatus
ENSOCUG00000013171	-	96	53.529	ENSGACG00000002618	-	98	53.529	Gasterosteus_aculeatus
ENSOCUG00000013171	-	96	53.801	ENSHBUG00000013527	nop16	95	53.801	Haplochromis_burtoni
ENSOCUG00000013171	-	100	90.449	ENSHGLG00000013437	NOP16	100	90.449	Heterocephalus_glaber_female
ENSOCUG00000013171	-	100	90.449	ENSHGLG00100011375	NOP16	100	90.449	Heterocephalus_glaber_male
ENSOCUG00000013171	-	96	50.588	ENSHCOG00000019999	nop16	97	50.588	Hippocampus_comes
ENSOCUG00000013171	-	94	48.503	ENSIPUG00000006682	nop16	95	48.503	Ictalurus_punctatus
ENSOCUG00000013171	-	100	92.222	ENSSTOG00000004869	-	100	92.222	Ictidomys_tridecemlineatus
ENSOCUG00000013171	-	100	89.888	ENSJJAG00000017655	Nop16	100	89.888	Jaculus_jaculus
ENSOCUG00000013171	-	96	55.294	ENSKMAG00000006164	nop16	95	55.294	Kryptolebias_marmoratus
ENSOCUG00000013171	-	96	54.706	ENSLBEG00000018355	nop16	78	54.706	Labrus_bergylta
ENSOCUG00000013171	-	99	63.277	ENSLACG00000014884	nop16	100	63.277	Latimeria_chalumnae
ENSOCUG00000013171	-	96	57.647	ENSLOCG00000012348	nop16	94	57.647	Lepisosteus_oculatus
ENSOCUG00000013171	-	100	91.573	ENSLAFG00000017886	-	100	91.573	Loxodonta_africana
ENSOCUG00000013171	-	96	57.647	ENSMAMG00000021868	nop16	95	57.647	Mastacembelus_armatus
ENSOCUG00000013171	-	96	54.386	ENSMZEG00005012112	nop16	95	54.386	Maylandia_zebra
ENSOCUG00000013171	-	57	69.608	ENSMGAG00000004726	-	100	69.608	Meleagris_gallopavo
ENSOCUG00000013171	-	94	80.952	ENSMAUG00000015569	-	99	80.952	Mesocricetus_auratus
ENSOCUG00000013171	-	60	87.736	ENSMAUG00000009852	-	100	87.736	Mesocricetus_auratus
ENSOCUG00000013171	-	100	91.011	ENSMOCG00000020788	Nop16	100	91.011	Microtus_ochrogaster
ENSOCUG00000013171	-	96	55.294	ENSMMOG00000016054	nop16	99	55.294	Mola_mola
ENSOCUG00000013171	-	100	81.111	ENSMODG00000005214	-	100	81.111	Monodelphis_domestica
ENSOCUG00000013171	-	96	52.353	ENSMALG00000021263	nop16	95	52.353	Monopterus_albus
ENSOCUG00000013171	-	100	90.449	MGP_CAROLIEiJ_G0018538	Nop16	100	90.449	Mus_caroli
ENSOCUG00000013171	-	100	91.011	ENSMUSG00000025869	Nop16	100	91.011	Mus_musculus
ENSOCUG00000013171	-	100	91.011	MGP_PahariEiJ_G0019603	Nop16	100	91.011	Mus_pahari
ENSOCUG00000013171	-	100	90.449	MGP_SPRETEiJ_G0019418	Nop16	100	90.449	Mus_spretus
ENSOCUG00000013171	-	100	91.011	ENSMPUG00000016964	-	100	91.011	Mustela_putorius_furo
ENSOCUG00000013171	-	100	94.382	ENSMPUG00000012552	-	100	94.382	Mustela_putorius_furo
ENSOCUG00000013171	-	99	87.571	ENSMLUG00000003504	-	99	87.571	Myotis_lucifugus
ENSOCUG00000013171	-	100	89.888	ENSNGAG00000018045	Nop16	100	89.888	Nannospalax_galili
ENSOCUG00000013171	-	96	53.216	ENSNBRG00000015181	nop16	96	53.216	Neolamprologus_brichardi
ENSOCUG00000013171	-	100	90.449	ENSODEG00000009586	-	100	90.449	Octodon_degus
ENSOCUG00000013171	-	96	55.882	ENSONIG00000016417	nop16	95	55.882	Oreochromis_niloticus
ENSOCUG00000013171	-	96	55.233	ENSORLG00000026611	nop16	95	55.233	Oryzias_latipes
ENSOCUG00000013171	-	96	57.059	ENSOMEG00000023001	nop16	95	57.059	Oryzias_melastigma
ENSOCUG00000013171	-	100	93.820	ENSOGAG00000000824	-	100	93.820	Otolemur_garnettii
ENSOCUG00000013171	-	100	91.011	ENSOARG00000002165	-	100	91.011	Ovis_aries
ENSOCUG00000013171	-	100	91.573	ENSPPAG00000035473	-	100	91.573	Pan_paniscus
ENSOCUG00000013171	-	100	93.258	ENSPPRG00000016600	-	100	93.258	Panthera_pardus
ENSOCUG00000013171	-	100	92.697	ENSPTIG00000011708	-	100	92.697	Panthera_tigris_altaica
ENSOCUG00000013171	-	100	91.573	ENSPTRG00000017560	NOP16	100	91.573	Pan_troglodytes
ENSOCUG00000013171	-	99	54.237	ENSPKIG00000009587	nop16	99	54.237	Paramormyrops_kingsleyae
ENSOCUG00000013171	-	79	66.197	ENSPSIG00000013546	-	99	66.197	Pelodiscus_sinensis
ENSOCUG00000013171	-	94	55.621	ENSPMGG00000003443	nop16	98	55.030	Periophthalmus_magnuspinnatus
ENSOCUG00000013171	-	100	91.011	ENSPEMG00000020268	Nop16	100	91.011	Peromyscus_maniculatus_bairdii
ENSOCUG00000013171	-	100	84.444	ENSPCIG00000009782	-	100	84.444	Phascolarctos_cinereus
ENSOCUG00000013171	-	96	52.941	ENSPFOG00000010549	nop16	95	52.941	Poecilia_formosa
ENSOCUG00000013171	-	77	52.555	ENSPLAG00000007124	nop16	70	52.555	Poecilia_latipinna
ENSOCUG00000013171	-	96	52.941	ENSPMEG00000008611	nop16	95	52.941	Poecilia_mexicana
ENSOCUG00000013171	-	96	52.941	ENSPREG00000012940	nop16	95	52.941	Poecilia_reticulata
ENSOCUG00000013171	-	99	92.090	ENSPPYG00000016070	-	99	92.090	Pongo_abelii
ENSOCUG00000013171	-	96	54.386	ENSPNYG00000013529	nop16	95	54.386	Pundamilia_nyererei
ENSOCUG00000013171	-	93	49.398	ENSPNAG00000016233	nop16	95	49.398	Pygocentrus_nattereri
ENSOCUG00000013171	-	100	90.449	ENSRNOG00000017284	Nop16	100	90.449	Rattus_norvegicus
ENSOCUG00000013171	-	100	82.682	ENSSHAG00000001724	-	100	82.682	Sarcophilus_harrisii
ENSOCUG00000013171	-	89	52.201	ENSSFOG00015010537	nop16	77	51.462	Scleropages_formosus
ENSOCUG00000013171	-	96	55.294	ENSSDUG00000022349	nop16	95	55.294	Seriola_dumerili
ENSOCUG00000013171	-	96	55.882	ENSSLDG00000025171	nop16	95	55.882	Seriola_lalandi_dorsalis
ENSOCUG00000013171	-	73	76.154	ENSSARG00000006699	-	61	76.154	Sorex_araneus
ENSOCUG00000013171	-	99	70.455	ENSSPUG00000006508	-	98	70.455	Sphenodon_punctatus
ENSOCUG00000013171	-	96	55.294	ENSSPAG00000011772	nop16	95	55.294	Stegastes_partitus
ENSOCUG00000013171	-	100	89.888	ENSSSCG00000029577	-	100	89.888	Sus_scrofa
ENSOCUG00000013171	-	100	71.667	ENSTGUG00000000543	-	100	71.667	Taeniopygia_guttata
ENSOCUG00000013171	-	96	54.386	ENSTRUG00000020255	nop16	95	54.386	Takifugu_rubripes
ENSOCUG00000013171	-	96	53.801	ENSTNIG00000007616	nop16	95	53.801	Tetraodon_nigroviridis
ENSOCUG00000013171	-	100	93.258	ENSUAMG00000005139	-	100	93.258	Ursus_americanus
ENSOCUG00000013171	-	99	92.614	ENSVVUG00000001697	-	94	92.614	Vulpes_vulpes
ENSOCUG00000013171	-	92	57.055	ENSXETG00000022342	nop16	95	57.055	Xenopus_tropicalis
ENSOCUG00000013171	-	96	53.801	ENSXCOG00000018829	nop16	97	53.801	Xiphophorus_couchianus
ENSOCUG00000013171	-	96	54.386	ENSXMAG00000029113	nop16	95	54.386	Xiphophorus_maculatus