EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000013468 (Gene tree)
Gene ID: 100353161
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 82057 bases
Position: chr4:15249363-15331419
Accession: 100353161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000011596	XRN_N	PF03159.18	4.7e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000013478	XRN2-201	3344	XM_002710942	ENSOCUP00000011596	950 (aa)	XP_002710988	G1T5H2

Gene Model

Click here to download ENSOCUG00000013468's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG
ocu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000013468's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000013468	XRN2	100	98.316	ENSG00000088930	XRN2	100	98.316	Homo_sapiens
ENSOCUG00000013468	XRN2	97	71.809	ENSAPOG00000009818	xrn2	100	70.540	Acanthochromis_polyacanthus
ENSOCUG00000013468	XRN2	100	98.211	ENSAMEG00000012581	XRN2	100	98.211	Ailuropoda_melanoleuca
ENSOCUG00000013468	XRN2	90	70.876	ENSACIG00000015047	xrn2	95	74.664	Amphilophus_citrinellus
ENSOCUG00000013468	XRN2	97	72.329	ENSAOCG00000023632	xrn2	100	71.066	Amphiprion_ocellaris
ENSOCUG00000013468	XRN2	97	72.157	ENSAPEG00000014871	xrn2	100	70.876	Amphiprion_percula
ENSOCUG00000013468	XRN2	95	71.723	ENSATEG00000001273	xrn2	97	71.036	Anabas_testudineus
ENSOCUG00000013468	XRN2	97	83.315	ENSAPLG00000013869	XRN2	99	83.746	Anas_platyrhynchos
ENSOCUG00000013468	XRN2	100	80.745	ENSACAG00000005565	XRN2	100	80.745	Anolis_carolinensis
ENSOCUG00000013468	XRN2	100	97.684	ENSANAG00000020126	XRN2	100	97.684	Aotus_nancymaae
ENSOCUG00000013468	XRN2	90	74.104	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSOCUG00000013468	XRN2	100	71.414	ENSAMXG00000018301	xrn2	100	71.414	Astyanax_mexicanus
ENSOCUG00000013468	XRN2	100	95.794	ENSBTAG00000011304	XRN2	100	95.794	Bos_taurus
ENSOCUG00000013468	XRN2	87	56.047	WBGene00006964	xrn-2	89	55.317	Caenorhabditis_elegans
ENSOCUG00000013468	XRN2	100	97.789	ENSCJAG00000005611	XRN2	100	97.789	Callithrix_jacchus
ENSOCUG00000013468	XRN2	100	98.316	ENSCAFG00000005185	XRN2	100	98.316	Canis_familiaris
ENSOCUG00000013468	XRN2	100	98.316	ENSCAFG00020027479	XRN2	100	98.316	Canis_lupus_dingo
ENSOCUG00000013468	XRN2	100	96.004	ENSCHIG00000006921	XRN2	100	96.004	Capra_hircus
ENSOCUG00000013468	XRN2	100	97.263	ENSTSYG00000008315	XRN2	100	97.263	Carlito_syrichta
ENSOCUG00000013468	XRN2	97	82.524	ENSCAPG00000010773	XRN2	99	82.524	Cavia_aperea
ENSOCUG00000013468	XRN2	100	98.105	ENSCPOG00000009407	XRN2	100	98.105	Cavia_porcellus
ENSOCUG00000013468	XRN2	100	98.632	ENSCATG00000040350	XRN2	100	98.632	Cercocebus_atys
ENSOCUG00000013468	XRN2	100	98.211	ENSCLAG00000013419	XRN2	100	98.211	Chinchilla_lanigera
ENSOCUG00000013468	XRN2	100	98.632	ENSCSAG00000011094	XRN2	100	98.632	Chlorocebus_sabaeus
ENSOCUG00000013468	XRN2	68	99.462	ENSCHOG00000013404	XRN2	70	99.462	Choloepus_hoffmanni
ENSOCUG00000013468	XRN2	100	84.583	ENSCPBG00000023533	XRN2	100	85.208	Chrysemys_picta_bellii
ENSOCUG00000013468	XRN2	86	60.382	ENSCING00000022336	-	100	60.740	Ciona_intestinalis
ENSOCUG00000013468	XRN2	87	59.189	ENSCSAVG00000011217	-	100	61.597	Ciona_savignyi
ENSOCUG00000013468	XRN2	100	98.632	ENSCANG00000040240	XRN2	100	98.632	Colobus_angolensis_palliatus
ENSOCUG00000013468	XRN2	98	96.878	ENSCGRG00001010676	Xrn2	99	96.878	Cricetulus_griseus_chok1gshd
ENSOCUG00000013468	XRN2	97	96.117	ENSCGRG00000006378	Xrn2	99	96.117	Cricetulus_griseus_crigri
ENSOCUG00000013468	XRN2	54	72.549	ENSCSEG00000005628	xrn2	100	72.549	Cynoglossus_semilaevis
ENSOCUG00000013468	XRN2	89	71.954	ENSCVAG00000018999	xrn2	98	77.143	Cyprinodon_variegatus
ENSOCUG00000013468	XRN2	100	69.815	ENSDARG00000101900	xrn2	96	78.011	Danio_rerio
ENSOCUG00000013468	XRN2	100	97.263	ENSDNOG00000001895	XRN2	100	97.263	Dasypus_novemcinctus
ENSOCUG00000013468	XRN2	100	95.789	ENSDORG00000005434	Xrn2	100	95.789	Dipodomys_ordii
ENSOCUG00000013468	XRN2	87	56.953	FBgn0031868	Rat1	87	56.832	Drosophila_melanogaster
ENSOCUG00000013468	XRN2	100	83.684	ENSETEG00000001740	XRN2	100	83.684	Echinops_telfairi
ENSOCUG00000013468	XRN2	84	71.636	ENSEBUG00000016136	xrn2	100	71.636	Eptatretus_burgeri
ENSOCUG00000013468	XRN2	100	97.684	ENSEASG00005002484	XRN2	100	97.684	Equus_asinus_asinus
ENSOCUG00000013468	XRN2	99	97.782	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSOCUG00000013468	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSOCUG00000013468	XRN2	100	70.492	ENSELUG00000000552	xrn2	100	70.902	Esox_lucius
ENSOCUG00000013468	XRN2	100	98.105	ENSFCAG00000007970	XRN2	100	98.105	Felis_catus
ENSOCUG00000013468	XRN2	100	83.124	ENSFALG00000004508	XRN2	100	83.543	Ficedula_albicollis
ENSOCUG00000013468	XRN2	100	97.789	ENSFDAG00000016311	XRN2	100	97.789	Fukomys_damarensis
ENSOCUG00000013468	XRN2	54	69.847	ENSFHEG00000013039	xrn2	98	69.847	Fundulus_heteroclitus
ENSOCUG00000013468	XRN2	86	73.147	ENSGMOG00000013436	xrn2	100	73.147	Gadus_morhua
ENSOCUG00000013468	XRN2	100	83.141	ENSGALG00000008372	XRN2	100	83.141	Gallus_gallus
ENSOCUG00000013468	XRN2	89	74.302	ENSGAFG00000014284	xrn2	98	74.302	Gambusia_affinis
ENSOCUG00000013468	XRN2	87	75.000	ENSGACG00000011870	xrn2	100	75.000	Gasterosteus_aculeatus
ENSOCUG00000013468	XRN2	100	84.375	ENSGAGG00000004884	XRN2	100	85.000	Gopherus_agassizii
ENSOCUG00000013468	XRN2	100	98.526	ENSGGOG00000013738	XRN2	100	98.526	Gorilla_gorilla
ENSOCUG00000013468	XRN2	54	74.664	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSOCUG00000013468	XRN2	100	96.842	ENSHGLG00000014831	XRN2	100	96.842	Heterocephalus_glaber_female
ENSOCUG00000013468	XRN2	100	96.842	ENSHGLG00100013130	XRN2	100	96.842	Heterocephalus_glaber_male
ENSOCUG00000013468	XRN2	99	68.320	ENSHCOG00000011994	xrn2	99	69.231	Hippocampus_comes
ENSOCUG00000013468	XRN2	100	69.929	ENSIPUG00000006639	xrn2	100	69.929	Ictalurus_punctatus
ENSOCUG00000013468	XRN2	100	98.632	ENSSTOG00000000589	XRN2	100	98.632	Ictidomys_tridecemlineatus
ENSOCUG00000013468	XRN2	100	97.053	ENSJJAG00000022128	Xrn2	100	97.053	Jaculus_jaculus
ENSOCUG00000013468	XRN2	54	79.883	ENSLBEG00000010041	xrn2	100	79.883	Labrus_bergylta
ENSOCUG00000013468	XRN2	94	77.086	ENSLACG00000008307	XRN2	99	79.755	Latimeria_chalumnae
ENSOCUG00000013468	XRN2	99	72.908	ENSLOCG00000016874	xrn2	100	72.908	Lepisosteus_oculatus
ENSOCUG00000013468	XRN2	100	96.211	ENSLAFG00000014624	XRN2	100	96.211	Loxodonta_africana
ENSOCUG00000013468	XRN2	100	98.632	ENSMFAG00000038122	XRN2	100	98.632	Macaca_fascicularis
ENSOCUG00000013468	XRN2	100	98.632	ENSMMUG00000011405	XRN2	100	98.632	Macaca_mulatta
ENSOCUG00000013468	XRN2	100	98.526	ENSMNEG00000040626	XRN2	100	98.526	Macaca_nemestrina
ENSOCUG00000013468	XRN2	100	98.526	ENSMLEG00000041897	XRN2	100	98.526	Mandrillus_leucophaeus
ENSOCUG00000013468	XRN2	95	72.905	ENSMAMG00000008633	xrn2	98	71.609	Mastacembelus_armatus
ENSOCUG00000013468	XRN2	90	76.069	ENSMZEG00005022362	xrn2	97	76.069	Maylandia_zebra
ENSOCUG00000013468	XRN2	99	81.562	ENSMGAG00000003196	XRN2	99	81.562	Meleagris_gallopavo
ENSOCUG00000013468	XRN2	100	97.053	ENSMAUG00000021842	Xrn2	100	97.053	Mesocricetus_auratus
ENSOCUG00000013468	XRN2	100	97.684	ENSMICG00000008126	XRN2	100	97.684	Microcebus_murinus
ENSOCUG00000013468	XRN2	100	96.105	ENSMOCG00000012588	Xrn2	100	96.105	Microtus_ochrogaster
ENSOCUG00000013468	XRN2	89	74.112	ENSMMOG00000017576	xrn2	96	74.432	Mola_mola
ENSOCUG00000013468	XRN2	100	91.053	ENSMODG00000006163	XRN2	100	91.053	Monodelphis_domestica
ENSOCUG00000013468	XRN2	91	72.584	ENSMALG00000011355	xrn2	99	72.584	Monopterus_albus
ENSOCUG00000013468	XRN2	100	96.004	MGP_CAROLIEiJ_G0024400	Xrn2	100	96.004	Mus_caroli
ENSOCUG00000013468	XRN2	100	96.215	ENSMUSG00000027433	Xrn2	100	96.215	Mus_musculus
ENSOCUG00000013468	XRN2	100	96.004	MGP_PahariEiJ_G0025843	Xrn2	100	96.004	Mus_pahari
ENSOCUG00000013468	XRN2	100	96.215	MGP_SPRETEiJ_G0025318	Xrn2	100	96.215	Mus_spretus
ENSOCUG00000013468	XRN2	100	96.587	ENSMPUG00000001198	XRN2	93	96.587	Mustela_putorius_furo
ENSOCUG00000013468	XRN2	100	97.579	ENSMLUG00000001536	XRN2	100	97.579	Myotis_lucifugus
ENSOCUG00000013468	XRN2	100	97.368	ENSNGAG00000018138	Xrn2	100	97.368	Nannospalax_galili
ENSOCUG00000013468	XRN2	90	76.273	ENSNBRG00000008062	xrn2	97	76.273	Neolamprologus_brichardi
ENSOCUG00000013468	XRN2	100	98.526	ENSNLEG00000009991	XRN2	100	98.526	Nomascus_leucogenys
ENSOCUG00000013468	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSOCUG00000013468	XRN2	75	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSOCUG00000013468	XRN2	100	97.684	ENSODEG00000010745	-	100	97.684	Octodon_degus
ENSOCUG00000013468	XRN2	98	88.565	ENSODEG00000000860	-	99	88.997	Octodon_degus
ENSOCUG00000013468	XRN2	100	71.959	ENSONIG00000018720	xrn2	100	72.165	Oreochromis_niloticus
ENSOCUG00000013468	XRN2	100	91.492	ENSOANG00000015673	XRN2	100	91.492	Ornithorhynchus_anatinus
ENSOCUG00000013468	XRN2	98	70.509	ENSORLG00000017213	xrn2	97	75.289	Oryzias_latipes
ENSOCUG00000013468	XRN2	98	70.509	ENSORLG00020001824	xrn2	100	70.163	Oryzias_latipes_hni
ENSOCUG00000013468	XRN2	98	70.301	ENSORLG00015019747	xrn2	100	69.959	Oryzias_latipes_hsok
ENSOCUG00000013468	XRN2	90	74.335	ENSOMEG00000019820	xrn2	100	69.340	Oryzias_melastigma
ENSOCUG00000013468	XRN2	100	97.056	ENSOGAG00000001068	XRN2	100	97.056	Otolemur_garnettii
ENSOCUG00000013468	XRN2	97	95.896	ENSOARG00000004443	XRN2	100	95.896	Ovis_aries
ENSOCUG00000013468	XRN2	100	98.526	ENSPPAG00000033549	XRN2	100	98.526	Pan_paniscus
ENSOCUG00000013468	XRN2	100	98.105	ENSPPRG00000008732	XRN2	100	98.105	Panthera_pardus
ENSOCUG00000013468	XRN2	97	98.054	ENSPTIG00000015683	XRN2	97	98.054	Panthera_tigris_altaica
ENSOCUG00000013468	XRN2	100	98.526	ENSPTRG00000013308	XRN2	100	98.526	Pan_troglodytes
ENSOCUG00000013468	XRN2	100	98.632	ENSPANG00000018088	XRN2	100	98.632	Papio_anubis
ENSOCUG00000013468	XRN2	100	70.348	ENSPKIG00000016889	xrn2	100	70.829	Paramormyrops_kingsleyae
ENSOCUG00000013468	XRN2	81	87.370	ENSPSIG00000014666	XRN2	100	87.370	Pelodiscus_sinensis
ENSOCUG00000013468	XRN2	100	96.211	ENSPEMG00000000111	Xrn2	100	96.211	Peromyscus_maniculatus_bairdii
ENSOCUG00000013468	XRN2	100	70.301	ENSPFOG00000004182	xrn2	99	70.704	Poecilia_formosa
ENSOCUG00000013468	XRN2	89	75.000	ENSPLAG00000007351	xrn2	96	75.000	Poecilia_latipinna
ENSOCUG00000013468	XRN2	94	68.662	ENSPMEG00000011798	xrn2	99	69.532	Poecilia_mexicana
ENSOCUG00000013468	XRN2	89	74.884	ENSPREG00000012452	xrn2	99	73.176	Poecilia_reticulata
ENSOCUG00000013468	XRN2	100	98.105	ENSPPYG00000010755	XRN2	100	98.105	Pongo_abelii
ENSOCUG00000013468	XRN2	100	90.861	ENSPCAG00000011191	XRN2	100	90.861	Procavia_capensis
ENSOCUG00000013468	XRN2	100	90.632	ENSPCOG00000016468	XRN2	100	90.632	Propithecus_coquereli
ENSOCUG00000013468	XRN2	93	94.833	ENSPVAG00000004596	XRN2	93	94.833	Pteropus_vampyrus
ENSOCUG00000013468	XRN2	90	74.104	ENSPNYG00000001765	xrn2	97	74.104	Pundamilia_nyererei
ENSOCUG00000013468	XRN2	100	71.429	ENSPNAG00000010956	xrn2	99	71.429	Pygocentrus_nattereri
ENSOCUG00000013468	XRN2	100	96.951	ENSRNOG00000011785	Xrn2	100	96.951	Rattus_norvegicus
ENSOCUG00000013468	XRN2	86	98.900	ENSRBIG00000036193	XRN2	100	98.900	Rhinopithecus_bieti
ENSOCUG00000013468	XRN2	100	98.632	ENSRROG00000044400	XRN2	90	98.632	Rhinopithecus_roxellana
ENSOCUG00000013468	XRN2	77	47.639	YOR048C	RAT1	63	53.846	Saccharomyces_cerevisiae
ENSOCUG00000013468	XRN2	100	98.000	ENSSBOG00000021014	XRN2	100	98.000	Saimiri_boliviensis_boliviensis
ENSOCUG00000013468	XRN2	100	72.033	ENSSFOG00015001091	xrn2	100	72.033	Scleropages_formosus
ENSOCUG00000013468	XRN2	92	73.363	ENSSMAG00000007834	xrn2	100	68.896	Scophthalmus_maximus
ENSOCUG00000013468	XRN2	91	72.285	ENSSDUG00000012802	xrn2	99	72.624	Seriola_dumerili
ENSOCUG00000013468	XRN2	93	73.898	ENSSLDG00000021273	xrn2	100	73.898	Seriola_lalandi_dorsalis
ENSOCUG00000013468	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSOCUG00000013468	XRN2	98	79.701	ENSSPUG00000005485	XRN2	96	79.808	Sphenodon_punctatus
ENSOCUG00000013468	XRN2	100	70.727	ENSSPAG00000016027	xrn2	99	70.727	Stegastes_partitus
ENSOCUG00000013468	XRN2	100	95.789	ENSSSCG00000007109	XRN2	100	95.789	Sus_scrofa
ENSOCUG00000013468	XRN2	100	81.628	ENSTGUG00000007535	XRN2	100	82.046	Taeniopygia_guttata
ENSOCUG00000013468	XRN2	100	68.113	ENSTRUG00000015489	xrn2	100	68.485	Takifugu_rubripes
ENSOCUG00000013468	XRN2	100	71.340	ENSTNIG00000010712	xrn2	100	71.340	Tetraodon_nigroviridis
ENSOCUG00000013468	XRN2	100	97.158	ENSTBEG00000004119	XRN2	100	97.158	Tupaia_belangeri
ENSOCUG00000013468	XRN2	93	97.838	ENSTTRG00000009087	XRN2	93	97.838	Tursiops_truncatus
ENSOCUG00000013468	XRN2	100	98.316	ENSUAMG00000024634	XRN2	100	98.316	Ursus_americanus
ENSOCUG00000013468	XRN2	97	98.054	ENSUMAG00000004012	XRN2	95	98.054	Ursus_maritimus
ENSOCUG00000013468	XRN2	89	89.822	ENSVPAG00000010694	XRN2	91	89.822	Vicugna_pacos
ENSOCUG00000013468	XRN2	100	98.316	ENSVVUG00000012178	XRN2	100	98.316	Vulpes_vulpes
ENSOCUG00000013468	XRN2	100	74.557	ENSXETG00000023501	xrn2	100	75.182	Xenopus_tropicalis
ENSOCUG00000013468	XRN2	100	68.859	ENSXMAG00000000242	xrn2	92	79.075	Xiphophorus_maculatus