EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000013561 (Gene tree)
Gene ID: 100345180
Gene Symbol: GFM1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 49307 bases
Position: chr14:53066421-53115727
Accession: 100345180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000011670	GTP_EFTU	PF00009.27	8e-64	1	1
ENSOCUP00000011670	GTP_EFTU_D2	PF03144.25	4.7e-18	1	1
ENSOCUP00000011670	EFG_IV	PF03764.18	2.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000013564	GFM1-201	3896	XM_002716331	ENSOCUP00000011670	754 (aa)	XP_002716377	G1T5N5

Gene Model

Click here to download ENSOCUG00000013561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000013561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000013561	GFM1	92	35.205	ENSOCUG00000005349	GFM2	93	35.342
ENSOCUG00000013561	GFM1	58	31.206	ENSOCUG00000006879	EFTUD2	51	31.206
ENSOCUG00000013561	GFM1	53	32.143	ENSOCUG00000017915	GUF1	57	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000013561	GFM1	98	93.478	ENSG00000168827	GFM1	100	100.000	Homo_sapiens
ENSOCUG00000013561	GFM1	91	79.240	ENSAPOG00000016489	gfm1	96	80.269	Acanthochromis_polyacanthus
ENSOCUG00000013561	GFM1	98	92.828	ENSAMEG00000013542	GFM1	98	92.828	Ailuropoda_melanoleuca
ENSOCUG00000013561	GFM1	96	76.616	ENSACIG00000014465	gfm1	94	76.616	Amphilophus_citrinellus
ENSOCUG00000013561	GFM1	97	79.698	ENSAOCG00000006023	gfm1	97	79.698	Amphiprion_ocellaris
ENSOCUG00000013561	GFM1	97	79.698	ENSAPEG00000024499	gfm1	99	80.195	Amphiprion_percula
ENSOCUG00000013561	GFM1	100	78.780	ENSATEG00000013789	gfm1	98	80.245	Anabas_testudineus
ENSOCUG00000013561	GFM1	96	83.333	ENSAPLG00000005022	GFM1	100	83.333	Anas_platyrhynchos
ENSOCUG00000013561	GFM1	97	82.162	ENSACAG00000006829	GFM1	100	82.162	Anolis_carolinensis
ENSOCUG00000013561	GFM1	100	92.308	ENSANAG00000035983	GFM1	98	93.324	Aotus_nancymaae
ENSOCUG00000013561	GFM1	97	81.868	ENSACLG00000016586	gfm1	99	80.632	Astatotilapia_calliptera
ENSOCUG00000013561	GFM1	100	79.443	ENSAMXG00000013435	gfm1	98	80.650	Astyanax_mexicanus
ENSOCUG00000013561	GFM1	100	93.236	ENSBTAG00000027795	GFM1	98	93.505	Bos_taurus
ENSOCUG00000013561	GFM1	99	55.451	WBGene00009246	gfm-1	99	55.615	Caenorhabditis_elegans
ENSOCUG00000013561	GFM1	100	92.440	ENSCJAG00000000363	GFM1	98	93.225	Callithrix_jacchus
ENSOCUG00000013561	GFM1	97	93.597	ENSCAFG00000009006	GFM1	100	94.675	Canis_familiaris
ENSOCUG00000013561	GFM1	98	93.369	ENSCAFG00020005878	GFM1	99	94.077	Canis_lupus_dingo
ENSOCUG00000013561	GFM1	100	93.236	ENSCHIG00000015220	GFM1	98	93.505	Capra_hircus
ENSOCUG00000013561	GFM1	100	93.899	ENSTSYG00000002013	GFM1	98	94.444	Carlito_syrichta
ENSOCUG00000013561	GFM1	98	80.997	ENSCAPG00000005699	GFM1	99	80.997	Cavia_aperea
ENSOCUG00000013561	GFM1	100	92.971	ENSCPOG00000001194	GFM1	98	93.505	Cavia_porcellus
ENSOCUG00000013561	GFM1	100	92.838	ENSCCAG00000025561	GFM1	98	93.605	Cebus_capucinus
ENSOCUG00000013561	GFM1	100	92.175	ENSCATG00000037622	GFM1	98	92.799	Cercocebus_atys
ENSOCUG00000013561	GFM1	98	92.162	ENSCLAG00000002503	GFM1	98	92.162	Chinchilla_lanigera
ENSOCUG00000013561	GFM1	100	92.175	ENSCSAG00000012162	GFM1	98	92.935	Chlorocebus_sabaeus
ENSOCUG00000013561	GFM1	100	84.218	ENSCHOG00000004867	GFM1	98	84.417	Choloepus_hoffmanni
ENSOCUG00000013561	GFM1	98	83.243	ENSCPBG00000018367	GFM1	98	83.221	Chrysemys_picta_bellii
ENSOCUG00000013561	GFM1	95	59.254	ENSCING00000011960	-	94	59.254	Ciona_intestinalis
ENSOCUG00000013561	GFM1	95	59.917	ENSCSAVG00000008514	-	99	59.917	Ciona_savignyi
ENSOCUG00000013561	GFM1	98	93.071	ENSCANG00000031714	GFM1	98	93.071	Colobus_angolensis_palliatus
ENSOCUG00000013561	GFM1	100	93.103	ENSCGRG00001022095	GFM1	98	93.775	Cricetulus_griseus_chok1gshd
ENSOCUG00000013561	GFM1	100	93.103	ENSCGRG00000012043	GFM1	98	93.775	Cricetulus_griseus_crigri
ENSOCUG00000013561	GFM1	95	76.356	ENSCSEG00000017088	gfm1	98	76.356	Cynoglossus_semilaevis
ENSOCUG00000013561	GFM1	98	81.402	ENSCVAG00000004126	gfm1	99	81.857	Cyprinodon_variegatus
ENSOCUG00000013561	GFM1	100	78.647	ENSDARG00000063624	gfm1	98	80.274	Danio_rerio
ENSOCUG00000013561	GFM1	54	92.176	ENSDNOG00000016385	-	100	92.176	Dasypus_novemcinctus
ENSOCUG00000013561	GFM1	100	90.981	ENSDORG00000014165	Gfm1	98	91.340	Dipodomys_ordii
ENSOCUG00000013561	GFM1	94	67.746	FBgn0263133	mEFG1	95	67.746	Drosophila_melanogaster
ENSOCUG00000013561	GFM1	98	81.916	ENSETEG00000019197	GFM1	98	81.916	Echinops_telfairi
ENSOCUG00000013561	GFM1	90	67.111	ENSEBUG00000012794	gfm1	99	67.111	Eptatretus_burgeri
ENSOCUG00000013561	GFM1	96	68.733	ENSEEUG00000000429	GFM1	100	68.733	Erinaceus_europaeus
ENSOCUG00000013561	GFM1	100	76.923	ENSELUG00000014728	gfm1	98	77.989	Esox_lucius
ENSOCUG00000013561	GFM1	98	94.181	ENSFCAG00000013291	GFM1	98	94.181	Felis_catus
ENSOCUG00000013561	GFM1	90	83.432	ENSFALG00000007619	GFM1	100	83.432	Ficedula_albicollis
ENSOCUG00000013561	GFM1	100	92.573	ENSFDAG00000016559	GFM1	98	93.099	Fukomys_damarensis
ENSOCUG00000013561	GFM1	99	80.187	ENSFHEG00000006091	gfm1	98	81.063	Fundulus_heteroclitus
ENSOCUG00000013561	GFM1	95	78.976	ENSGMOG00000010161	gfm1	99	78.976	Gadus_morhua
ENSOCUG00000013561	GFM1	98	81.843	ENSGALG00000009634	GFM1	99	81.843	Gallus_gallus
ENSOCUG00000013561	GFM1	100	80.637	ENSGAFG00000012527	gfm1	98	81.744	Gambusia_affinis
ENSOCUG00000013561	GFM1	99	78.486	ENSGACG00000009864	gfm1	97	80.110	Gasterosteus_aculeatus
ENSOCUG00000013561	GFM1	98	93.750	ENSGGOG00000003085	GFM1	98	93.750	Gorilla_gorilla
ENSOCUG00000013561	GFM1	97	82.005	ENSHBUG00000002120	gfm1	97	82.005	Haplochromis_burtoni
ENSOCUG00000013561	GFM1	100	92.175	ENSHGLG00000016855	GFM1	98	92.693	Heterocephalus_glaber_female
ENSOCUG00000013561	GFM1	100	92.175	ENSHGLG00100013049	GFM1	98	92.693	Heterocephalus_glaber_male
ENSOCUG00000013561	GFM1	95	81.538	ENSHCOG00000007638	gfm1	98	80.645	Hippocampus_comes
ENSOCUG00000013561	GFM1	96	80.690	ENSIPUG00000005873	gfm1	97	80.690	Ictalurus_punctatus
ENSOCUG00000013561	GFM1	98	91.192	ENSSTOG00000010150	GFM1	99	91.192	Ictidomys_tridecemlineatus
ENSOCUG00000013561	GFM1	100	92.440	ENSJJAG00000016447	Gfm1	98	92.828	Jaculus_jaculus
ENSOCUG00000013561	GFM1	99	78.313	ENSKMAG00000020768	gfm1	98	79.155	Kryptolebias_marmoratus
ENSOCUG00000013561	GFM1	93	80.912	ENSLBEG00000021315	gfm1	100	80.912	Labrus_bergylta
ENSOCUG00000013561	GFM1	100	79.708	ENSLACG00000012295	GFM1	99	80.432	Latimeria_chalumnae
ENSOCUG00000013561	GFM1	96	75.890	ENSLOCG00000003778	gfm1	99	75.890	Lepisosteus_oculatus
ENSOCUG00000013561	GFM1	97	90.366	ENSLAFG00000010945	GFM1	100	89.793	Loxodonta_africana
ENSOCUG00000013561	GFM1	100	92.440	ENSMFAG00000035731	GFM1	98	93.207	Macaca_fascicularis
ENSOCUG00000013561	GFM1	100	92.573	ENSMMUG00000004961	GFM1	98	93.342	Macaca_mulatta
ENSOCUG00000013561	GFM1	100	92.573	ENSMNEG00000033245	GFM1	98	93.207	Macaca_nemestrina
ENSOCUG00000013561	GFM1	96	91.460	ENSMLEG00000030908	GFM1	100	91.252	Mandrillus_leucophaeus
ENSOCUG00000013561	GFM1	100	79.178	ENSMAMG00000011760	gfm1	98	80.654	Mastacembelus_armatus
ENSOCUG00000013561	GFM1	97	82.005	ENSMZEG00005016639	gfm1	97	82.005	Maylandia_zebra
ENSOCUG00000013561	GFM1	96	82.897	ENSMGAG00000010641	GFM1	97	82.897	Meleagris_gallopavo
ENSOCUG00000013561	GFM1	99	94.236	ENSMAUG00000000611	Gfm1	98	94.317	Mesocricetus_auratus
ENSOCUG00000013561	GFM1	98	93.614	ENSMICG00000049086	GFM1	98	93.505	Microcebus_murinus
ENSOCUG00000013561	GFM1	100	92.971	ENSMOCG00000000465	Gfm1	98	93.505	Microtus_ochrogaster
ENSOCUG00000013561	GFM1	98	79.111	ENSMMOG00000012538	gfm1	99	79.512	Mola_mola
ENSOCUG00000013561	GFM1	96	87.172	ENSMODG00000015673	GFM1	97	87.172	Monodelphis_domestica
ENSOCUG00000013561	GFM1	98	78.610	ENSMALG00000012508	gfm1	99	78.610	Monopterus_albus
ENSOCUG00000013561	GFM1	100	92.706	MGP_CAROLIEiJ_G0025052	Gfm1	98	93.234	Mus_caroli
ENSOCUG00000013561	GFM1	100	92.838	ENSMUSG00000027774	Gfm1	98	93.369	Mus_musculus
ENSOCUG00000013561	GFM1	100	92.706	MGP_PahariEiJ_G0026495	Gfm1	98	93.487	Mus_pahari
ENSOCUG00000013561	GFM1	100	92.838	MGP_SPRETEiJ_G0025994	Gfm1	98	93.369	Mus_spretus
ENSOCUG00000013561	GFM1	100	93.103	ENSMPUG00000002859	GFM1	98	93.369	Mustela_putorius_furo
ENSOCUG00000013561	GFM1	100	93.501	ENSMLUG00000000452	GFM1	98	93.911	Myotis_lucifugus
ENSOCUG00000013561	GFM1	100	91.910	ENSNGAG00000012375	Gfm1	98	92.789	Nannospalax_galili
ENSOCUG00000013561	GFM1	96	81.793	ENSNBRG00000004631	gfm1	99	81.793	Neolamprologus_brichardi
ENSOCUG00000013561	GFM1	98	93.886	ENSNLEG00000004176	GFM1	98	93.886	Nomascus_leucogenys
ENSOCUG00000013561	GFM1	91	79.270	ENSMEUG00000007784	GFM1	100	79.270	Notamacropus_eugenii
ENSOCUG00000013561	GFM1	100	92.175	ENSOPRG00000009860	GFM1	99	93.460	Ochotona_princeps
ENSOCUG00000013561	GFM1	98	93.505	ENSODEG00000004316	GFM1	98	93.505	Octodon_degus
ENSOCUG00000013561	GFM1	97	82.005	ENSONIG00000003772	gfm1	97	82.005	Oreochromis_niloticus
ENSOCUG00000013561	GFM1	94	82.652	ENSORLG00000006487	gfm1	100	82.652	Oryzias_latipes
ENSOCUG00000013561	GFM1	97	81.868	ENSORLG00020003362	gfm1	97	81.868	Oryzias_latipes_hni
ENSOCUG00000013561	GFM1	97	81.456	ENSORLG00015005829	gfm1	97	81.456	Oryzias_latipes_hsok
ENSOCUG00000013561	GFM1	97	82.143	ENSOMEG00000012894	gfm1	97	82.143	Oryzias_melastigma
ENSOCUG00000013561	GFM1	100	91.645	ENSOGAG00000008298	GFM1	98	92.016	Otolemur_garnettii
ENSOCUG00000013561	GFM1	96	92.995	ENSOARG00000002409	GFM1	100	92.995	Ovis_aries
ENSOCUG00000013561	GFM1	98	93.750	ENSPPAG00000033881	GFM1	98	93.750	Pan_paniscus
ENSOCUG00000013561	GFM1	98	94.181	ENSPPRG00000009281	GFM1	98	94.181	Panthera_pardus
ENSOCUG00000013561	GFM1	98	94.046	ENSPTIG00000012416	GFM1	98	94.046	Panthera_tigris_altaica
ENSOCUG00000013561	GFM1	98	93.750	ENSPTRG00000015570	GFM1	98	93.750	Pan_troglodytes
ENSOCUG00000013561	GFM1	100	92.440	ENSPANG00000016512	GFM1	98	93.071	Papio_anubis
ENSOCUG00000013561	GFM1	95	82.451	ENSPKIG00000004876	gfm1	96	82.451	Paramormyrops_kingsleyae
ENSOCUG00000013561	GFM1	100	82.626	ENSPSIG00000012567	GFM1	98	83.627	Pelodiscus_sinensis
ENSOCUG00000013561	GFM1	95	79.334	ENSPMGG00000014068	gfm1	99	79.334	Periophthalmus_magnuspinnatus
ENSOCUG00000013561	GFM1	100	93.369	ENSPEMG00000008942	Gfm1	98	93.911	Peromyscus_maniculatus_bairdii
ENSOCUG00000013561	GFM1	83	85.987	ENSPCIG00000020195	GFM1	98	85.987	Phascolarctos_cinereus
ENSOCUG00000013561	GFM1	100	81.034	ENSPFOG00000011022	gfm1	98	82.153	Poecilia_formosa
ENSOCUG00000013561	GFM1	96	82.507	ENSPLAG00000019585	gfm1	98	81.375	Poecilia_latipinna
ENSOCUG00000013561	GFM1	100	80.902	ENSPMEG00000012376	gfm1	98	82.016	Poecilia_mexicana
ENSOCUG00000013561	GFM1	100	80.637	ENSPREG00000001332	gfm1	93	81.744	Poecilia_reticulata
ENSOCUG00000013561	GFM1	98	93.750	ENSPPYG00000014244	GFM1	98	93.750	Pongo_abelii
ENSOCUG00000013561	GFM1	93	89.189	ENSPCAG00000008934	GFM1	100	89.189	Procavia_capensis
ENSOCUG00000013561	GFM1	98	94.022	ENSPCOG00000022259	GFM1	98	93.911	Propithecus_coquereli
ENSOCUG00000013561	GFM1	100	92.971	ENSPVAG00000013605	GFM1	98	93.234	Pteropus_vampyrus
ENSOCUG00000013561	GFM1	97	81.731	ENSPNYG00000006037	gfm1	98	81.793	Pundamilia_nyererei
ENSOCUG00000013561	GFM1	100	79.443	ENSPNAG00000001237	gfm1	97	81.667	Pygocentrus_nattereri
ENSOCUG00000013561	GFM1	100	92.706	ENSRNOG00000012873	Gfm1	98	93.505	Rattus_norvegicus
ENSOCUG00000013561	GFM1	98	92.935	ENSRBIG00000031363	GFM1	98	92.935	Rhinopithecus_bieti
ENSOCUG00000013561	GFM1	98	93.071	ENSRROG00000031081	GFM1	98	93.071	Rhinopithecus_roxellana
ENSOCUG00000013561	GFM1	92	56.835	YLR069C	-	90	56.835	Saccharomyces_cerevisiae
ENSOCUG00000013561	GFM1	100	93.103	ENSSBOG00000023252	GFM1	98	93.750	Saimiri_boliviensis_boliviensis
ENSOCUG00000013561	GFM1	97	88.082	ENSSHAG00000017772	GFM1	98	87.145	Sarcophilus_harrisii
ENSOCUG00000013561	GFM1	99	79.652	ENSSFOG00015003117	gfm1	99	81.319	Scleropages_formosus
ENSOCUG00000013561	GFM1	99	77.793	ENSSMAG00000013221	gfm1	98	78.610	Scophthalmus_maximus
ENSOCUG00000013561	GFM1	98	79.404	ENSSDUG00000018665	gfm1	98	79.564	Seriola_dumerili
ENSOCUG00000013561	GFM1	98	79.296	ENSSLDG00000020606	gfm1	98	79.564	Seriola_lalandi_dorsalis
ENSOCUG00000013561	GFM1	97	81.319	ENSSPUG00000018686	GFM1	98	81.319	Sphenodon_punctatus
ENSOCUG00000013561	GFM1	97	79.837	ENSSPAG00000008800	gfm1	98	79.837	Stegastes_partitus
ENSOCUG00000013561	GFM1	100	92.715	ENSSSCG00000025651	GFM1	98	93.099	Sus_scrofa
ENSOCUG00000013561	GFM1	99	78.581	ENSTRUG00000009244	gfm1	99	78.841	Takifugu_rubripes
ENSOCUG00000013561	GFM1	97	81.319	ENSTNIG00000007729	gfm1	97	81.319	Tetraodon_nigroviridis
ENSOCUG00000013561	GFM1	89	83.704	ENSTBEG00000017404	GFM1	89	83.704	Tupaia_belangeri
ENSOCUG00000013561	GFM1	98	92.558	ENSTTRG00000001735	GFM1	97	92.558	Tursiops_truncatus
ENSOCUG00000013561	GFM1	98	93.640	ENSUAMG00000026381	GFM1	98	93.640	Ursus_americanus
ENSOCUG00000013561	GFM1	98	93.505	ENSUMAG00000011268	GFM1	98	93.505	Ursus_maritimus
ENSOCUG00000013561	GFM1	100	89.788	ENSVPAG00000009444	GFM1	98	89.986	Vicugna_pacos
ENSOCUG00000013561	GFM1	99	91.600	ENSVVUG00000020091	GFM1	100	94.231	Vulpes_vulpes
ENSOCUG00000013561	GFM1	100	83.179	ENSXETG00000032551	GFM1	97	84.605	Xenopus_tropicalis
ENSOCUG00000013561	GFM1	52	80.612	ENSXCOG00000012590	gfm1	90	80.612	Xiphophorus_couchianus
ENSOCUG00000013561	GFM1	100	80.504	ENSXMAG00000000261	gfm1	98	81.608	Xiphophorus_maculatus