EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000013773 (Gene tree)
Gene ID: 100351584
Gene Symbol: TDP2
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 19005 bases
Position: chr12:12334744-12353748
Accession: 100351584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000011849	Exo_endo_phos	PF03372.23	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000013772	TDP2-201	1164	XM_002714156	ENSOCUP00000011849	359 (aa)	XP_002714202	G1T635

Gene Model

Click here to download ENSOCUG00000013773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000013773's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000013773	TDP2	94	86.510	ENSG00000111802	TDP2	98	85.311	Homo_sapiens
ENSOCUG00000013773	TDP2	69	52.381	ENSAPOG00000018379	-	88	52.381	Acanthochromis_polyacanthus
ENSOCUG00000013773	TDP2	77	86.691	ENSAMEG00000010230	TDP2	99	86.691	Ailuropoda_melanoleuca
ENSOCUG00000013773	TDP2	51	51.087	ENSAOCG00000010081	-	81	51.087	Amphiprion_ocellaris
ENSOCUG00000013773	TDP2	72	50.958	ENSAPEG00000004208	-	93	50.958	Amphiprion_percula
ENSOCUG00000013773	TDP2	80	46.048	ENSATEG00000010663	-	93	46.048	Anabas_testudineus
ENSOCUG00000013773	TDP2	93	66.071	ENSACAG00000002332	TDP2	93	65.882	Anolis_carolinensis
ENSOCUG00000013773	TDP2	95	84.548	ENSANAG00000020033	TDP2	98	83.333	Aotus_nancymaae
ENSOCUG00000013773	TDP2	78	46.454	ENSACLG00000016174	tdp2b	95	46.454	Astatotilapia_calliptera
ENSOCUG00000013773	TDP2	75	52.963	ENSACLG00000016148	tdp2b	95	52.963	Astatotilapia_calliptera
ENSOCUG00000013773	TDP2	78	46.809	ENSACLG00000016132	tdp2b	95	46.809	Astatotilapia_calliptera
ENSOCUG00000013773	TDP2	95	53.989	ENSAMXG00000011775	tdp2b	98	53.989	Astyanax_mexicanus
ENSOCUG00000013773	TDP2	76	48.540	ENSAMXG00000036549	tdp2a	89	48.540	Astyanax_mexicanus
ENSOCUG00000013773	TDP2	94	84.548	ENSBTAG00000000365	TDP2	98	83.708	Bos_taurus
ENSOCUG00000013773	TDP2	89	31.288	WBGene00013405	tdpt-1	85	32.209	Caenorhabditis_elegans
ENSOCUG00000013773	TDP2	98	83.898	ENSCJAG00000006074	TDP2	98	83.898	Callithrix_jacchus
ENSOCUG00000013773	TDP2	96	83.862	ENSCJAG00000021963	-	96	83.862	Callithrix_jacchus
ENSOCUG00000013773	TDP2	94	85.380	ENSCAFG00000010428	TDP2	96	89.928	Canis_familiaris
ENSOCUG00000013773	TDP2	77	89.928	ENSCAFG00020009994	TDP2	96	89.928	Canis_lupus_dingo
ENSOCUG00000013773	TDP2	96	75.287	ENSCHIG00000015294	-	95	88.571	Capra_hircus
ENSOCUG00000013773	TDP2	85	87.702	ENSTSYG00000037199	TDP2	100	87.702	Carlito_syrichta
ENSOCUG00000013773	TDP2	94	86.765	ENSCPOG00000006390	TDP2	97	86.455	Cavia_porcellus
ENSOCUG00000013773	TDP2	98	84.181	ENSCCAG00000022734	TDP2	98	84.181	Cebus_capucinus
ENSOCUG00000013773	TDP2	94	86.510	ENSCATG00000022076	TDP2	95	86.207	Cercocebus_atys
ENSOCUG00000013773	TDP2	96	86.167	ENSCLAG00000002072	TDP2	97	86.167	Chinchilla_lanigera
ENSOCUG00000013773	TDP2	96	86.167	ENSCSAG00000007769	TDP2	97	86.167	Chlorocebus_sabaeus
ENSOCUG00000013773	TDP2	95	68.222	ENSCPBG00000006551	TDP2	88	67.919	Chrysemys_picta_bellii
ENSOCUG00000013773	TDP2	94	86.217	ENSCANG00000040122	TDP2	97	86.167	Colobus_angolensis_palliatus
ENSOCUG00000013773	TDP2	94	68.328	ENSCGRG00001000384	Tdp2	99	64.865	Cricetulus_griseus_chok1gshd
ENSOCUG00000013773	TDP2	94	67.552	ENSCGRG00000010250	Tdp2	95	67.341	Cricetulus_griseus_crigri
ENSOCUG00000013773	TDP2	93	54.000	ENSCVAG00000003114	tdp2b	95	54.000	Cyprinodon_variegatus
ENSOCUG00000013773	TDP2	93	52.198	ENSDARG00000035954	tdp2b	94	52.198	Danio_rerio
ENSOCUG00000013773	TDP2	68	47.347	ENSDARG00000069941	tdp2a	55	47.347	Danio_rerio
ENSOCUG00000013773	TDP2	98	81.073	ENSDNOG00000044082	TDP2	96	81.073	Dasypus_novemcinctus
ENSOCUG00000013773	TDP2	77	84.173	ENSETEG00000019096	TDP2	100	84.173	Echinops_telfairi
ENSOCUG00000013773	TDP2	73	54.545	ENSEBUG00000006535	tdp2a	62	54.545	Eptatretus_burgeri
ENSOCUG00000013773	TDP2	94	86.510	ENSEASG00005007656	TDP2	96	86.246	Equus_asinus_asinus
ENSOCUG00000013773	TDP2	94	86.510	ENSECAG00000014264	TDP2	96	86.246	Equus_caballus
ENSOCUG00000013773	TDP2	94	81.818	ENSEEUG00000010776	TDP2	97	81.020	Erinaceus_europaeus
ENSOCUG00000013773	TDP2	76	46.545	ENSELUG00000009321	tdp2a	85	46.886	Esox_lucius
ENSOCUG00000013773	TDP2	93	50.954	ENSELUG00000016449	tdp2b	96	50.954	Esox_lucius
ENSOCUG00000013773	TDP2	96	86.167	ENSFCAG00000025612	TDP2	96	86.167	Felis_catus
ENSOCUG00000013773	TDP2	94	58.430	ENSFALG00000004710	TDP2	98	57.983	Ficedula_albicollis
ENSOCUG00000013773	TDP2	78	89.643	ENSFDAG00000006512	TDP2	97	89.643	Fukomys_damarensis
ENSOCUG00000013773	TDP2	72	50.000	ENSFHEG00000013560	-	87	50.000	Fundulus_heteroclitus
ENSOCUG00000013773	TDP2	94	65.205	ENSGALG00000013637	TDP2	98	63.462	Gallus_gallus
ENSOCUG00000013773	TDP2	96	67.052	ENSGAGG00000002853	TDP2	88	67.052	Gopherus_agassizii
ENSOCUG00000013773	TDP2	94	86.217	ENSGGOG00000014237	TDP2	98	85.028	Gorilla_gorilla
ENSOCUG00000013773	TDP2	60	53.211	ENSHBUG00000005421	-	91	53.211	Haplochromis_burtoni
ENSOCUG00000013773	TDP2	93	53.541	ENSHBUG00000002714	tdp2b	95	53.541	Haplochromis_burtoni
ENSOCUG00000013773	TDP2	98	83.099	ENSHGLG00000008655	TDP2	99	83.099	Heterocephalus_glaber_female
ENSOCUG00000013773	TDP2	98	83.380	ENSHGLG00100019087	TDP2	99	83.380	Heterocephalus_glaber_male
ENSOCUG00000013773	TDP2	95	53.243	ENSIPUG00000013691	tdp2b	97	53.243	Ictalurus_punctatus
ENSOCUG00000013773	TDP2	97	64.286	ENSJJAG00000021685	Tdp2	100	64.286	Jaculus_jaculus
ENSOCUG00000013773	TDP2	72	50.575	ENSKMAG00000015485	-	84	50.575	Kryptolebias_marmoratus
ENSOCUG00000013773	TDP2	94	60.571	ENSLACG00000008852	TDP2	95	60.571	Latimeria_chalumnae
ENSOCUG00000013773	TDP2	77	59.206	ENSLOCG00000005817	tdp2b	99	59.206	Lepisosteus_oculatus
ENSOCUG00000013773	TDP2	94	85.630	ENSLAFG00000002567	TDP2	99	85.303	Loxodonta_africana
ENSOCUG00000013773	TDP2	94	86.217	ENSMFAG00000045296	TDP2	97	86.167	Macaca_fascicularis
ENSOCUG00000013773	TDP2	94	86.217	ENSMMUG00000009803	TDP2	97	86.167	Macaca_mulatta
ENSOCUG00000013773	TDP2	94	86.217	ENSMNEG00000038003	TDP2	97	86.167	Macaca_nemestrina
ENSOCUG00000013773	TDP2	94	86.510	ENSMLEG00000028883	TDP2	97	86.455	Mandrillus_leucophaeus
ENSOCUG00000013773	TDP2	93	54.441	ENSMAMG00000013654	tdp2b	94	54.441	Mastacembelus_armatus
ENSOCUG00000013773	TDP2	73	46.970	ENSMZEG00005004103	tdp2b	88	46.970	Maylandia_zebra
ENSOCUG00000013773	TDP2	77	46.786	ENSMZEG00005004126	tdp2b	91	48.315	Maylandia_zebra
ENSOCUG00000013773	TDP2	76	51.273	ENSMZEG00005004077	tdp2b	93	51.273	Maylandia_zebra
ENSOCUG00000013773	TDP2	70	45.669	ENSMZEG00005003980	-	82	45.669	Maylandia_zebra
ENSOCUG00000013773	TDP2	70	50.794	ENSMZEG00005004055	tdp2b	83	50.794	Maylandia_zebra
ENSOCUG00000013773	TDP2	74	51.504	ENSMZEG00005004153	tdp2b	94	51.504	Maylandia_zebra
ENSOCUG00000013773	TDP2	93	52.975	ENSMZEG00005003950	tdp2b	95	52.975	Maylandia_zebra
ENSOCUG00000013773	TDP2	94	66.372	ENSMGAG00000008014	TDP2	97	64.543	Meleagris_gallopavo
ENSOCUG00000013773	TDP2	94	67.742	ENSMAUG00000014451	Tdp2	93	67.147	Mesocricetus_auratus
ENSOCUG00000013773	TDP2	96	85.879	ENSMICG00000000039	TDP2	95	88.530	Microcebus_murinus
ENSOCUG00000013773	TDP2	94	68.328	ENSMOCG00000002823	Tdp2	93	67.723	Microtus_ochrogaster
ENSOCUG00000013773	TDP2	87	64.634	ENSMODG00000011653	TDP2	99	65.244	Monodelphis_domestica
ENSOCUG00000013773	TDP2	69	51.200	ENSMALG00000005368	-	84	51.200	Monopterus_albus
ENSOCUG00000013773	TDP2	94	66.860	MGP_CAROLIEiJ_G0018354	Tdp2	91	67.055	Mus_caroli
ENSOCUG00000013773	TDP2	94	67.733	ENSMUSG00000035958	Tdp2	91	67.930	Mus_musculus
ENSOCUG00000013773	TDP2	94	65.982	MGP_PahariEiJ_G0019417	Tdp2	91	66.176	Mus_pahari
ENSOCUG00000013773	TDP2	94	67.930	MGP_SPRETEiJ_G0019220	Tdp2	91	67.930	Mus_spretus
ENSOCUG00000013773	TDP2	98	80.726	ENSMPUG00000004516	TDP2	99	80.726	Mustela_putorius_furo
ENSOCUG00000013773	TDP2	96	74.713	ENSMLUG00000013506	TDP2	96	74.713	Myotis_lucifugus
ENSOCUG00000013773	TDP2	97	62.147	ENSNGAG00000001375	Tdp2	95	62.147	Nannospalax_galili
ENSOCUG00000013773	TDP2	95	86.880	ENSNLEG00000002447	TDP2	97	86.880	Nomascus_leucogenys
ENSOCUG00000013773	TDP2	97	88.473	ENSOPRG00000016299	TDP2	100	88.473	Ochotona_princeps
ENSOCUG00000013773	TDP2	78	89.643	ENSODEG00000014018	TDP2	95	89.643	Octodon_degus
ENSOCUG00000013773	TDP2	71	48.450	ENSORLG00000001661	-	94	48.450	Oryzias_latipes
ENSOCUG00000013773	TDP2	71	48.837	ENSORLG00020004634	-	94	48.837	Oryzias_latipes_hni
ENSOCUG00000013773	TDP2	74	43.446	ENSORLG00015008190	-	97	43.446	Oryzias_latipes_hsok
ENSOCUG00000013773	TDP2	79	45.392	ENSOMEG00000015899	-	97	45.392	Oryzias_melastigma
ENSOCUG00000013773	TDP2	98	82.768	ENSOGAG00000025303	TDP2	96	82.768	Otolemur_garnettii
ENSOCUG00000013773	TDP2	94	86.217	ENSPPAG00000029023	TDP2	98	85.028	Pan_paniscus
ENSOCUG00000013773	TDP2	96	85.591	ENSPPRG00000015398	TDP2	96	85.591	Panthera_pardus
ENSOCUG00000013773	TDP2	78	87.900	ENSPTIG00000018574	TDP2	96	87.900	Panthera_tigris_altaica
ENSOCUG00000013773	TDP2	94	86.217	ENSPTRG00000017778	TDP2	98	85.028	Pan_troglodytes
ENSOCUG00000013773	TDP2	94	87.390	ENSPANG00000017590	TDP2	97	87.320	Papio_anubis
ENSOCUG00000013773	TDP2	95	52.113	ENSPKIG00000006483	tdp2b	96	52.113	Paramormyrops_kingsleyae
ENSOCUG00000013773	TDP2	81	67.698	ENSPSIG00000004948	TDP2	100	67.698	Pelodiscus_sinensis
ENSOCUG00000013773	TDP2	94	67.442	ENSPEMG00000001788	Tdp2	93	66.857	Peromyscus_maniculatus_bairdii
ENSOCUG00000013773	TDP2	70	47.566	ENSPMAG00000001570	tdp2b	97	47.566	Petromyzon_marinus
ENSOCUG00000013773	TDP2	94	68.235	ENSPCIG00000007316	TDP2	91	67.335	Phascolarctos_cinereus
ENSOCUG00000013773	TDP2	69	48.400	ENSPFOG00000017990	-	90	48.400	Poecilia_formosa
ENSOCUG00000013773	TDP2	69	48.000	ENSPLAG00000019439	-	79	48.000	Poecilia_latipinna
ENSOCUG00000013773	TDP2	69	48.800	ENSPMEG00000010824	-	84	48.800	Poecilia_mexicana
ENSOCUG00000013773	TDP2	94	85.630	ENSPPYG00000016282	TDP2	95	81.283	Pongo_abelii
ENSOCUG00000013773	TDP2	98	85.876	ENSPCOG00000021415	TDP2	98	88.489	Propithecus_coquereli
ENSOCUG00000013773	TDP2	78	45.973	ENSPNYG00000011504	tdp2b	97	45.973	Pundamilia_nyererei
ENSOCUG00000013773	TDP2	93	52.975	ENSPNYG00000011532	tdp2b	95	52.975	Pundamilia_nyererei
ENSOCUG00000013773	TDP2	56	45.320	ENSPNYG00000001944	-	71	50.000	Pundamilia_nyererei
ENSOCUG00000013773	TDP2	70	50.794	ENSPNAG00000022162	tdp2a	64	50.794	Pygocentrus_nattereri
ENSOCUG00000013773	TDP2	94	66.667	ENSRNOG00000018246	Tdp2	93	66.667	Rattus_norvegicus
ENSOCUG00000013773	TDP2	94	86.217	ENSRBIG00000037119	TDP2	97	86.167	Rhinopithecus_bieti
ENSOCUG00000013773	TDP2	100	82.432	ENSRROG00000005025	TDP2	96	85.172	Rhinopithecus_roxellana
ENSOCUG00000013773	TDP2	98	84.463	ENSSBOG00000028734	TDP2	95	86.505	Saimiri_boliviensis_boliviensis
ENSOCUG00000013773	TDP2	99	65.854	ENSSHAG00000002506	TDP2	98	65.854	Sarcophilus_harrisii
ENSOCUG00000013773	TDP2	71	50.394	ENSSFOG00015011322	-	71	51.190	Scleropages_formosus
ENSOCUG00000013773	TDP2	77	78.495	ENSSARG00000013547	TDP2	100	78.495	Sorex_araneus
ENSOCUG00000013773	TDP2	94	65.429	ENSSPUG00000008288	TDP2	97	64.607	Sphenodon_punctatus
ENSOCUG00000013773	TDP2	94	86.217	ENSSSCG00000001092	TDP2	98	85.269	Sus_scrofa
ENSOCUG00000013773	TDP2	72	65.637	ENSTGUG00000009035	TDP2	99	65.637	Taeniopygia_guttata
ENSOCUG00000013773	TDP2	94	52.738	ENSTRUG00000014347	tdp2b	96	52.738	Takifugu_rubripes
ENSOCUG00000013773	TDP2	69	52.400	ENSTRUG00000012218	-	87	52.400	Takifugu_rubripes
ENSOCUG00000013773	TDP2	70	52.107	ENSTNIG00000010260	TDP2	99	52.107	Tetraodon_nigroviridis
ENSOCUG00000013773	TDP2	94	52.101	ENSTNIG00000017792	tdp2b	96	52.101	Tetraodon_nigroviridis
ENSOCUG00000013773	TDP2	94	86.510	ENSTTRG00000016376	TDP2	96	86.246	Tursiops_truncatus
ENSOCUG00000013773	TDP2	96	79.480	ENSUAMG00000025939	TDP2	97	79.480	Ursus_americanus
ENSOCUG00000013773	TDP2	77	86.691	ENSUMAG00000020111	TDP2	93	86.691	Ursus_maritimus
ENSOCUG00000013773	TDP2	98	58.981	ENSXETG00000014826	tdp2	99	58.981	Xenopus_tropicalis
ENSOCUG00000013773	TDP2	69	49.004	ENSXCOG00000010778	-	69	49.004	Xiphophorus_couchianus
ENSOCUG00000013773	TDP2	69	49.004	ENSXMAG00000022252	-	72	49.004	Xiphophorus_maculatus