EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000013853 (Gene tree)
Gene ID: 100357449
Gene Symbol: NCBP1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 43939 bases
Position: chr1:15392249-15436187
Accession: 100357449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000011921	MIF4G_like	PF09088.11	3.5e-36	1	1
ENSOCUP00000011921	MIF4G_like_2	PF09090.11	2.9e-85	1	1
ENSOCUP00000011921	MIF4G	PF02854.19	8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000013859	NCBP1-201	2740	XM_008263220	ENSOCUP00000011921	801 (aa)	XP_008261442	G1T696

Gene Model

Click here to download ENSOCUG00000013853's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03013	RNA transport	KEGG
ocu03015	mRNA surveillance pathway	KEGG
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000013853's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000013853	NCBP1	97	98.586	ENSG00000136937	NCBP1	98	98.586	Homo_sapiens
ENSOCUG00000013853	NCBP1	97	83.333	ENSAPOG00000008002	NCBP1	98	82.692	Acanthochromis_polyacanthus
ENSOCUG00000013853	NCBP1	97	98.715	ENSAMEG00000004763	NCBP1	98	98.715	Ailuropoda_melanoleuca
ENSOCUG00000013853	NCBP1	97	83.697	ENSACIG00000000274	NCBP1	98	83.055	Amphilophus_citrinellus
ENSOCUG00000013853	NCBP1	97	83.462	ENSAOCG00000021148	NCBP1	98	82.821	Amphiprion_ocellaris
ENSOCUG00000013853	NCBP1	97	83.462	ENSAPEG00000001701	NCBP1	98	82.821	Amphiprion_percula
ENSOCUG00000013853	NCBP1	97	82.564	ENSATEG00000006929	NCBP1	98	82.179	Anabas_testudineus
ENSOCUG00000013853	NCBP1	92	90.405	ENSAPLG00000016318	NCBP1	98	90.541	Anas_platyrhynchos
ENSOCUG00000013853	NCBP1	97	86.514	ENSACAG00000004409	NCBP1	85	86.387	Anolis_carolinensis
ENSOCUG00000013853	NCBP1	97	95.507	ENSANAG00000025744	NCBP1	97	99.001	Aotus_nancymaae
ENSOCUG00000013853	NCBP1	97	82.821	ENSACLG00000014812	NCBP1	98	82.436	Astatotilapia_calliptera
ENSOCUG00000013853	NCBP1	97	81.330	ENSAMXG00000016364	NCBP1	98	80.818	Astyanax_mexicanus
ENSOCUG00000013853	NCBP1	97	98.201	ENSBTAG00000009732	NCBP1	99	97.598	Bos_taurus
ENSOCUG00000013853	NCBP1	98	34.907	WBGene00018156	ncbp-1	99	34.286	Caenorhabditis_elegans
ENSOCUG00000013853	NCBP1	97	98.843	ENSCJAG00000010840	NCBP1	98	98.954	Callithrix_jacchus
ENSOCUG00000013853	NCBP1	97	98.715	ENSCAFG00000002445	NCBP1	98	98.715	Canis_familiaris
ENSOCUG00000013853	NCBP1	97	97.938	ENSCAFG00020017997	NCBP1	98	98.954	Canis_lupus_dingo
ENSOCUG00000013853	NCBP1	97	97.943	ENSCHIG00000020139	NCBP1	98	97.943	Capra_hircus
ENSOCUG00000013853	NCBP1	50	99.005	ENSTSYG00000011914	NCBP1	98	99.373	Carlito_syrichta
ENSOCUG00000013853	NCBP1	80	89.062	ENSCAPG00000014252	NCBP1	90	88.906	Cavia_aperea
ENSOCUG00000013853	NCBP1	94	96.946	ENSCPOG00000012573	NCBP1	98	96.946	Cavia_porcellus
ENSOCUG00000013853	NCBP1	97	98.715	ENSCCAG00000032297	NCBP1	98	98.715	Cebus_capucinus
ENSOCUG00000013853	NCBP1	97	98.586	ENSCATG00000010052	NCBP1	98	98.837	Cercocebus_atys
ENSOCUG00000013853	NCBP1	97	98.586	ENSCLAG00000014339	NCBP1	98	98.586	Chinchilla_lanigera
ENSOCUG00000013853	NCBP1	97	98.586	ENSCSAG00000010929	NCBP1	98	98.586	Chlorocebus_sabaeus
ENSOCUG00000013853	NCBP1	88	94.231	ENSCHOG00000010332	NCBP1	89	94.231	Choloepus_hoffmanni
ENSOCUG00000013853	NCBP1	97	85.513	ENSCPBG00000024344	NCBP1	97	90.469	Chrysemys_picta_bellii
ENSOCUG00000013853	NCBP1	96	53.708	ENSCING00000008990	-	98	53.453	Ciona_intestinalis
ENSOCUG00000013853	NCBP1	96	52.792	ENSCSAVG00000005300	-	96	52.665	Ciona_savignyi
ENSOCUG00000013853	NCBP1	97	98.586	ENSCANG00000036913	NCBP1	98	98.586	Colobus_angolensis_palliatus
ENSOCUG00000013853	NCBP1	97	97.686	ENSCGRG00001015771	Ncbp1	98	97.686	Cricetulus_griseus_chok1gshd
ENSOCUG00000013853	NCBP1	96	97.662	ENSCGRG00000010311	Ncbp1	98	98.039	Cricetulus_griseus_crigri
ENSOCUG00000013853	NCBP1	97	82.436	ENSCSEG00000012377	NCBP1	98	82.308	Cynoglossus_semilaevis
ENSOCUG00000013853	NCBP1	97	80.410	ENSCVAG00000008795	NCBP1	98	81.050	Cyprinodon_variegatus
ENSOCUG00000013853	NCBP1	97	97.429	ENSDNOG00000006885	NCBP1	98	97.459	Dasypus_novemcinctus
ENSOCUG00000013853	NCBP1	97	93.350	ENSDORG00000013652	Ncbp1	98	93.350	Dipodomys_ordii
ENSOCUG00000013853	NCBP1	97	56.582	FBgn0022942	Cbp80	98	56.943	Drosophila_melanogaster
ENSOCUG00000013853	NCBP1	83	33.675	FBgn0038887	CG7907	87	33.675	Drosophila_melanogaster
ENSOCUG00000013853	NCBP1	86	93.018	ENSETEG00000009705	NCBP1	87	93.018	Echinops_telfairi
ENSOCUG00000013853	NCBP1	97	72.855	ENSEBUG00000008386	NCBP1	98	72.471	Eptatretus_burgeri
ENSOCUG00000013853	NCBP1	97	98.201	ENSEASG00005022795	NCBP1	98	98.201	Equus_asinus_asinus
ENSOCUG00000013853	NCBP1	97	98.329	ENSECAG00000013847	NCBP1	98	98.329	Equus_caballus
ENSOCUG00000013853	NCBP1	94	93.510	ENSEEUG00000015973	NCBP1	99	93.113	Erinaceus_europaeus
ENSOCUG00000013853	NCBP1	97	80.282	ENSELUG00000022519	NCBP1	98	81.050	Esox_lucius
ENSOCUG00000013853	NCBP1	97	98.586	ENSFCAG00000001206	NCBP1	98	98.586	Felis_catus
ENSOCUG00000013853	NCBP1	95	89.077	ENSFALG00000001193	NCBP1	98	89.207	Ficedula_albicollis
ENSOCUG00000013853	NCBP1	97	98.329	ENSFDAG00000010864	NCBP1	98	98.562	Fukomys_damarensis
ENSOCUG00000013853	NCBP1	97	81.633	ENSFHEG00000000655	NCBP1	98	81.122	Fundulus_heteroclitus
ENSOCUG00000013853	NCBP1	97	78.827	ENSGMOG00000008653	NCBP1	97	78.827	Gadus_morhua
ENSOCUG00000013853	NCBP1	95	90.289	ENSGALG00000002087	NCBP1	98	89.948	Gallus_gallus
ENSOCUG00000013853	NCBP1	97	82.581	ENSGAFG00000017787	NCBP1	98	82.452	Gambusia_affinis
ENSOCUG00000013853	NCBP1	97	81.274	ENSGACG00000016772	NCBP1	97	80.892	Gasterosteus_aculeatus
ENSOCUG00000013853	NCBP1	95	89.193	ENSGAGG00000019483	NCBP1	97	90.185	Gopherus_agassizii
ENSOCUG00000013853	NCBP1	97	98.586	ENSGGOG00000001376	NCBP1	98	98.586	Gorilla_gorilla
ENSOCUG00000013853	NCBP1	97	82.821	ENSHBUG00000020843	NCBP1	98	82.436	Haplochromis_burtoni
ENSOCUG00000013853	NCBP1	97	85.897	ENSHGLG00000018112	-	98	85.897	Heterocephalus_glaber_female
ENSOCUG00000013853	NCBP1	97	98.458	ENSHGLG00000001882	NCBP1	98	98.458	Heterocephalus_glaber_female
ENSOCUG00000013853	NCBP1	97	85.641	ENSHGLG00100017373	-	98	85.641	Heterocephalus_glaber_male
ENSOCUG00000013853	NCBP1	97	98.458	ENSHGLG00100013014	NCBP1	98	98.458	Heterocephalus_glaber_male
ENSOCUG00000013853	NCBP1	76	71.987	ENSHCOG00000000204	NCBP1	89	71.987	Hippocampus_comes
ENSOCUG00000013853	NCBP1	97	81.818	ENSIPUG00000007275	ncbp1	98	81.434	Ictalurus_punctatus
ENSOCUG00000013853	NCBP1	97	98.715	ENSSTOG00000002695	NCBP1	98	98.715	Ictidomys_tridecemlineatus
ENSOCUG00000013853	NCBP1	97	81.609	ENSKMAG00000003594	NCBP1	99	86.032	Kryptolebias_marmoratus
ENSOCUG00000013853	NCBP1	97	80.479	ENSLBEG00000011661	NCBP1	98	79.975	Labrus_bergylta
ENSOCUG00000013853	NCBP1	97	80.000	ENSLACG00000013955	NCBP1	98	79.494	Latimeria_chalumnae
ENSOCUG00000013853	NCBP1	97	71.827	ENSLOCG00000009579	NCBP1	98	71.827	Lepisosteus_oculatus
ENSOCUG00000013853	NCBP1	97	97.943	ENSLAFG00000005999	NCBP1	98	97.943	Loxodonta_africana
ENSOCUG00000013853	NCBP1	97	98.586	ENSMFAG00000030994	NCBP1	98	98.837	Macaca_fascicularis
ENSOCUG00000013853	NCBP1	96	98.827	ENSMMUG00000012281	NCBP1	98	98.837	Macaca_mulatta
ENSOCUG00000013853	NCBP1	97	98.586	ENSMNEG00000042790	NCBP1	98	98.586	Macaca_nemestrina
ENSOCUG00000013853	NCBP1	97	98.586	ENSMLEG00000030374	NCBP1	98	98.586	Mandrillus_leucophaeus
ENSOCUG00000013853	NCBP1	97	83.077	ENSMAMG00000014806	NCBP1	98	82.308	Mastacembelus_armatus
ENSOCUG00000013853	NCBP1	97	82.821	ENSMZEG00005003469	NCBP1	98	82.436	Maylandia_zebra
ENSOCUG00000013853	NCBP1	93	83.155	ENSMZEG00005009290	-	97	83.021	Maylandia_zebra
ENSOCUG00000013853	NCBP1	97	97.028	ENSMAUG00000020583	Ncbp1	98	97.028	Mesocricetus_auratus
ENSOCUG00000013853	NCBP1	97	98.201	ENSMICG00000012682	NCBP1	98	98.201	Microcebus_murinus
ENSOCUG00000013853	NCBP1	97	97.301	ENSMOCG00000015818	Ncbp1	98	97.301	Microtus_ochrogaster
ENSOCUG00000013853	NCBP1	87	82.260	ENSMMOG00000002610	NCBP1	98	82.117	Mola_mola
ENSOCUG00000013853	NCBP1	97	93.548	ENSMODG00000003202	NCBP1	97	93.290	Monodelphis_domestica
ENSOCUG00000013853	NCBP1	97	82.179	ENSMALG00000003547	NCBP1	98	81.667	Monopterus_albus
ENSOCUG00000013853	NCBP1	97	97.301	MGP_CAROLIEiJ_G0025982	Ncbp1	98	97.301	Mus_caroli
ENSOCUG00000013853	NCBP1	97	97.301	ENSMUSG00000028330	Ncbp1	98	97.301	Mus_musculus
ENSOCUG00000013853	NCBP1	97	97.558	MGP_PahariEiJ_G0028318	Ncbp1	98	97.558	Mus_pahari
ENSOCUG00000013853	NCBP1	97	97.301	MGP_SPRETEiJ_G0026945	Ncbp1	98	97.301	Mus_spretus
ENSOCUG00000013853	NCBP1	97	98.586	ENSMPUG00000006399	NCBP1	98	98.586	Mustela_putorius_furo
ENSOCUG00000013853	NCBP1	95	97.647	ENSMLUG00000015201	NCBP1	98	97.647	Myotis_lucifugus
ENSOCUG00000013853	NCBP1	97	97.301	ENSNGAG00000014101	Ncbp1	98	97.301	Nannospalax_galili
ENSOCUG00000013853	NCBP1	75	85.590	ENSNBRG00000014674	NCBP1	97	85.590	Neolamprologus_brichardi
ENSOCUG00000013853	NCBP1	97	98.586	ENSNLEG00000016909	NCBP1	98	98.837	Nomascus_leucogenys
ENSOCUG00000013853	NCBP1	85	94.146	ENSMEUG00000010672	NCBP1	88	93.171	Notamacropus_eugenii
ENSOCUG00000013853	NCBP1	83	93.559	ENSOPRG00000002144	-	88	93.559	Ochotona_princeps
ENSOCUG00000013853	NCBP1	97	98.329	ENSODEG00000003232	NCBP1	98	98.329	Octodon_degus
ENSOCUG00000013853	NCBP1	97	82.821	ENSONIG00000001502	NCBP1	98	82.436	Oreochromis_niloticus
ENSOCUG00000013853	NCBP1	78	95.666	ENSOANG00000001918	NCBP1	100	95.666	Ornithorhynchus_anatinus
ENSOCUG00000013853	NCBP1	97	80.867	ENSORLG00000011008	NCBP1	98	80.485	Oryzias_latipes
ENSOCUG00000013853	NCBP1	97	80.867	ENSORLG00020017455	NCBP1	98	80.485	Oryzias_latipes_hni
ENSOCUG00000013853	NCBP1	97	80.995	ENSORLG00015012127	NCBP1	98	80.612	Oryzias_latipes_hsok
ENSOCUG00000013853	NCBP1	97	81.505	ENSOMEG00000020698	NCBP1	98	81.378	Oryzias_melastigma
ENSOCUG00000013853	NCBP1	97	99.100	ENSOGAG00000013888	NCBP1	98	99.100	Otolemur_garnettii
ENSOCUG00000013853	NCBP1	97	97.943	ENSOARG00000011233	NCBP1	98	97.943	Ovis_aries
ENSOCUG00000013853	NCBP1	97	98.586	ENSPPAG00000026462	NCBP1	98	98.586	Pan_paniscus
ENSOCUG00000013853	NCBP1	97	98.715	ENSPPRG00000022574	NCBP1	98	98.715	Panthera_pardus
ENSOCUG00000013853	NCBP1	97	98.715	ENSPTIG00000018507	NCBP1	98	98.715	Panthera_tigris_altaica
ENSOCUG00000013853	NCBP1	97	98.586	ENSPTRG00000021167	NCBP1	98	98.586	Pan_troglodytes
ENSOCUG00000013853	NCBP1	97	98.586	ENSPANG00000025591	NCBP1	98	98.837	Papio_anubis
ENSOCUG00000013853	NCBP1	97	80.641	ENSPKIG00000015861	NCBP1	98	80.513	Paramormyrops_kingsleyae
ENSOCUG00000013853	NCBP1	61	89.091	ENSPSIG00000009558	NCBP1	97	89.293	Pelodiscus_sinensis
ENSOCUG00000013853	NCBP1	97	78.799	ENSPMGG00000020476	NCBP1	98	78.289	Periophthalmus_magnuspinnatus
ENSOCUG00000013853	NCBP1	97	97.429	ENSPEMG00000020105	Ncbp1	98	97.429	Peromyscus_maniculatus_bairdii
ENSOCUG00000013853	NCBP1	97	66.920	ENSPMAG00000005533	NCBP1	98	66.920	Petromyzon_marinus
ENSOCUG00000013853	NCBP1	97	93.290	ENSPCIG00000015800	NCBP1	97	94.526	Phascolarctos_cinereus
ENSOCUG00000013853	NCBP1	97	81.633	ENSPFOG00000004158	NCBP1	98	81.250	Poecilia_formosa
ENSOCUG00000013853	NCBP1	97	82.202	ENSPLAG00000020002	NCBP1	98	81.690	Poecilia_latipinna
ENSOCUG00000013853	NCBP1	97	82.202	ENSPMEG00000019821	NCBP1	98	81.690	Poecilia_mexicana
ENSOCUG00000013853	NCBP1	97	82.097	ENSPREG00000006035	NCBP1	98	81.586	Poecilia_reticulata
ENSOCUG00000013853	NCBP1	97	98.586	ENSPPYG00000019426	NCBP1	98	98.586	Pongo_abelii
ENSOCUG00000013853	NCBP1	87	89.759	ENSPCAG00000009943	NCBP1	88	89.759	Procavia_capensis
ENSOCUG00000013853	NCBP1	79	99.342	ENSPCOG00000020024	NCBP1	96	99.342	Propithecus_coquereli
ENSOCUG00000013853	NCBP1	97	98.072	ENSPVAG00000005924	NCBP1	98	98.072	Pteropus_vampyrus
ENSOCUG00000013853	NCBP1	87	83.143	ENSPNYG00000002140	NCBP1	97	83.000	Pundamilia_nyererei
ENSOCUG00000013853	NCBP1	97	81.841	ENSPNAG00000027753	NCBP1	98	81.458	Pygocentrus_nattereri
ENSOCUG00000013853	NCBP1	97	97.686	ENSRNOG00000023605	Ncbp1	98	97.686	Rattus_norvegicus
ENSOCUG00000013853	NCBP1	97	98.586	ENSRBIG00000043175	NCBP1	98	98.837	Rhinopithecus_bieti
ENSOCUG00000013853	NCBP1	97	98.586	ENSRROG00000029767	NCBP1	98	98.586	Rhinopithecus_roxellana
ENSOCUG00000013853	NCBP1	97	98.715	ENSSBOG00000019378	NCBP1	98	98.715	Saimiri_boliviensis_boliviensis
ENSOCUG00000013853	NCBP1	65	93.776	ENSSHAG00000015882	NCBP1	67	93.724	Sarcophilus_harrisii
ENSOCUG00000013853	NCBP1	95	80.971	ENSSFOG00015001872	NCBP1	98	80.000	Scleropages_formosus
ENSOCUG00000013853	NCBP1	97	81.098	ENSSMAG00000007463	NCBP1	98	80.843	Scophthalmus_maximus
ENSOCUG00000013853	NCBP1	97	82.968	ENSSDUG00000007019	NCBP1	100	82.627	Seriola_dumerili
ENSOCUG00000013853	NCBP1	97	82.692	ENSSLDG00000021924	NCBP1	98	82.308	Seriola_lalandi_dorsalis
ENSOCUG00000013853	NCBP1	82	89.865	ENSSARG00000007274	NCBP1	85	89.865	Sorex_araneus
ENSOCUG00000013853	NCBP1	97	81.677	ENSSPUG00000008609	NCBP1	98	81.677	Sphenodon_punctatus
ENSOCUG00000013853	NCBP1	97	83.205	ENSSPAG00000012550	NCBP1	98	82.821	Stegastes_partitus
ENSOCUG00000013853	NCBP1	97	98.458	ENSSSCG00000005366	NCBP1	98	98.458	Sus_scrofa
ENSOCUG00000013853	NCBP1	97	82.949	ENSTGUG00000001472	NCBP1	98	83.590	Taeniopygia_guttata
ENSOCUG00000013853	NCBP1	97	81.410	ENSTRUG00000005287	NCBP1	98	81.026	Takifugu_rubripes
ENSOCUG00000013853	NCBP1	97	95.244	ENSTBEG00000004035	NCBP1	98	95.244	Tupaia_belangeri
ENSOCUG00000013853	NCBP1	85	98.742	ENSTTRG00000000507	NCBP1	86	98.742	Tursiops_truncatus
ENSOCUG00000013853	NCBP1	97	98.586	ENSUAMG00000005471	NCBP1	98	98.586	Ursus_americanus
ENSOCUG00000013853	NCBP1	94	96.424	ENSUMAG00000011865	NCBP1	98	98.954	Ursus_maritimus
ENSOCUG00000013853	NCBP1	97	94.344	ENSVPAG00000010537	NCBP1	98	94.344	Vicugna_pacos
ENSOCUG00000013853	NCBP1	97	98.715	ENSVVUG00000019725	NCBP1	98	98.715	Vulpes_vulpes
ENSOCUG00000013853	NCBP1	97	80.977	ENSXETG00000010179	ncbp1	98	80.977	Xenopus_tropicalis
ENSOCUG00000013853	NCBP1	97	82.330	ENSXMAG00000018253	NCBP1	98	81.818	Xiphophorus_maculatus