EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000013867 (Gene tree)
Gene ID: 100357330
Gene Symbol: PNLDC1
Alias: -
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 17565 bases
Position: chr12:149644369-149661933
Accession: 100357330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000011929	CAF1	PF04857.20	1.1e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000013869	PNLDC1-201	2122	XM_002714964	ENSOCUP00000011929	531 (aa)	XP_002715010	G1T6A2

Gene Model

Click here to download ENSOCUG00000013867's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000013867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000013867	PNLDC1	99	86.742	ENSG00000146453	PNLDC1	99	86.742	Homo_sapiens
ENSOCUG00000013867	PNLDC1	99	87.146	ENSAMEG00000015371	PNLDC1	99	87.146	Ailuropoda_melanoleuca
ENSOCUG00000013867	PNLDC1	95	59.064	ENSAPLG00000007014	PNLDC1	98	59.064	Anas_platyrhynchos
ENSOCUG00000013867	PNLDC1	99	59.699	ENSACAG00000013667	PNLDC1	99	59.699	Anolis_carolinensis
ENSOCUG00000013867	PNLDC1	100	86.064	ENSANAG00000034713	PNLDC1	100	86.497	Aotus_nancymaae
ENSOCUG00000013867	PNLDC1	95	86.255	ENSBTAG00000015166	PNLDC1	95	86.255	Bos_taurus
ENSOCUG00000013867	PNLDC1	100	85.122	ENSCJAG00000011865	PNLDC1	100	85.433	Callithrix_jacchus
ENSOCUG00000013867	PNLDC1	100	88.136	ENSCAFG00000000740	PNLDC1	100	88.136	Canis_familiaris
ENSOCUG00000013867	PNLDC1	100	86.064	ENSCAFG00020017742	PNLDC1	100	86.064	Canis_lupus_dingo
ENSOCUG00000013867	PNLDC1	100	83.835	ENSCHIG00000003141	PNLDC1	100	83.835	Capra_hircus
ENSOCUG00000013867	PNLDC1	100	83.992	ENSTSYG00000005606	PNLDC1	100	83.992	Carlito_syrichta
ENSOCUG00000013867	PNLDC1	100	62.030	ENSCAPG00000011893	PNLDC1	100	62.030	Cavia_aperea
ENSOCUG00000013867	PNLDC1	100	78.759	ENSCPOG00000019565	PNLDC1	100	78.759	Cavia_porcellus
ENSOCUG00000013867	PNLDC1	100	86.252	ENSCCAG00000026232	PNLDC1	100	86.252	Cebus_capucinus
ENSOCUG00000013867	PNLDC1	100	86.252	ENSCATG00000033196	PNLDC1	100	86.252	Cercocebus_atys
ENSOCUG00000013867	PNLDC1	99	84.151	ENSCLAG00000003228	PNLDC1	99	84.151	Chinchilla_lanigera
ENSOCUG00000013867	PNLDC1	97	85.465	ENSCSAG00000012478	PNLDC1	99	85.465	Chlorocebus_sabaeus
ENSOCUG00000013867	PNLDC1	96	66.406	ENSCPBG00000004050	PNLDC1	100	66.406	Chrysemys_picta_bellii
ENSOCUG00000013867	PNLDC1	95	86.561	ENSCANG00000043076	PNLDC1	97	86.561	Colobus_angolensis_palliatus
ENSOCUG00000013867	PNLDC1	100	80.038	ENSCGRG00001007470	-	99	80.038	Cricetulus_griseus_chok1gshd
ENSOCUG00000013867	PNLDC1	100	64.972	ENSCGRG00001011981	-	99	64.972	Cricetulus_griseus_chok1gshd
ENSOCUG00000013867	PNLDC1	100	80.038	ENSCGRG00000010221	-	99	80.038	Cricetulus_griseus_crigri
ENSOCUG00000013867	PNLDC1	100	67.420	ENSCGRG00000003103	-	99	67.420	Cricetulus_griseus_crigri
ENSOCUG00000013867	PNLDC1	100	85.526	ENSDNOG00000013709	PNLDC1	100	85.526	Dasypus_novemcinctus
ENSOCUG00000013867	PNLDC1	100	80.899	ENSDORG00000011517	Pnldc1	99	87.540	Dipodomys_ordii
ENSOCUG00000013867	PNLDC1	93	73.887	ENSETEG00000007587	PNLDC1	99	73.887	Echinops_telfairi
ENSOCUG00000013867	PNLDC1	98	30.206	ENSEBUG00000008118	PNLDC1	98	30.206	Eptatretus_burgeri
ENSOCUG00000013867	PNLDC1	100	79.554	ENSEASG00005019029	PNLDC1	100	79.554	Equus_asinus_asinus
ENSOCUG00000013867	PNLDC1	100	87.759	ENSECAG00000012898	PNLDC1	100	87.759	Equus_caballus
ENSOCUG00000013867	PNLDC1	67	75.000	ENSEEUG00000005717	-	86	75.000	Erinaceus_europaeus
ENSOCUG00000013867	PNLDC1	100	87.571	ENSFCAG00000002848	PNLDC1	100	87.571	Felis_catus
ENSOCUG00000013867	PNLDC1	94	57.256	ENSFALG00000012081	PNLDC1	99	57.256	Ficedula_albicollis
ENSOCUG00000013867	PNLDC1	100	83.616	ENSFDAG00000021334	PNLDC1	100	83.616	Fukomys_damarensis
ENSOCUG00000013867	PNLDC1	79	58.907	ENSGALG00000011624	PNLDC1	82	58.907	Gallus_gallus
ENSOCUG00000013867	PNLDC1	99	67.045	ENSGAGG00000015276	PNLDC1	100	67.975	Gopherus_agassizii
ENSOCUG00000013867	PNLDC1	100	86.252	ENSGGOG00000014077	PNLDC1	100	86.252	Gorilla_gorilla
ENSOCUG00000013867	PNLDC1	100	84.934	ENSHGLG00000006889	PNLDC1	100	84.934	Heterocephalus_glaber_female
ENSOCUG00000013867	PNLDC1	100	84.934	ENSHGLG00100018275	PNLDC1	100	84.934	Heterocephalus_glaber_male
ENSOCUG00000013867	PNLDC1	99	89.015	ENSSTOG00000005595	PNLDC1	99	89.015	Ictidomys_tridecemlineatus
ENSOCUG00000013867	PNLDC1	99	79.584	ENSJJAG00000009937	Pnldc1	99	79.584	Jaculus_jaculus
ENSOCUG00000013867	PNLDC1	59	84.762	ENSLAFG00000030189	PNLDC1	92	84.762	Loxodonta_africana
ENSOCUG00000013867	PNLDC1	100	87.006	ENSMFAG00000041296	PNLDC1	100	87.006	Macaca_fascicularis
ENSOCUG00000013867	PNLDC1	100	87.006	ENSMMUG00000004181	PNLDC1	100	87.006	Macaca_mulatta
ENSOCUG00000013867	PNLDC1	100	87.194	ENSMNEG00000034271	PNLDC1	100	87.194	Macaca_nemestrina
ENSOCUG00000013867	PNLDC1	100	83.051	ENSMLEG00000044059	PNLDC1	100	83.051	Mandrillus_leucophaeus
ENSOCUG00000013867	PNLDC1	95	58.696	ENSMGAG00000012470	PNLDC1	97	58.696	Meleagris_gallopavo
ENSOCUG00000013867	PNLDC1	99	65.660	ENSMAUG00000012298	Pnldc1	100	65.660	Mesocricetus_auratus
ENSOCUG00000013867	PNLDC1	100	86.064	ENSMICG00000008021	PNLDC1	100	86.064	Microcebus_murinus
ENSOCUG00000013867	PNLDC1	100	86.492	ENSMOCG00000014287	Pnldc1	100	86.492	Microtus_ochrogaster
ENSOCUG00000013867	PNLDC1	99	75.142	ENSMODG00000007420	PNLDC1	99	75.142	Monodelphis_domestica
ENSOCUG00000013867	PNLDC1	100	86.441	MGP_CAROLIEiJ_G0021045	Pnldc1	100	86.441	Mus_caroli
ENSOCUG00000013867	PNLDC1	100	87.006	ENSMUSG00000073460	Pnldc1	100	88.889	Mus_musculus
ENSOCUG00000013867	PNLDC1	100	86.842	MGP_PahariEiJ_G0023361	Pnldc1	100	86.842	Mus_pahari
ENSOCUG00000013867	PNLDC1	100	86.817	MGP_SPRETEiJ_G0021975	Pnldc1	100	86.817	Mus_spretus
ENSOCUG00000013867	PNLDC1	99	87.358	ENSMPUG00000004920	PNLDC1	99	87.358	Mustela_putorius_furo
ENSOCUG00000013867	PNLDC1	100	86.629	ENSMLUG00000000747	PNLDC1	100	86.629	Myotis_lucifugus
ENSOCUG00000013867	PNLDC1	100	87.194	ENSNGAG00000017714	Pnldc1	99	87.194	Nannospalax_galili
ENSOCUG00000013867	PNLDC1	97	84.884	ENSNLEG00000011282	PNLDC1	99	84.884	Nomascus_leucogenys
ENSOCUG00000013867	PNLDC1	54	65.625	ENSMEUG00000014042	-	100	65.625	Notamacropus_eugenii
ENSOCUG00000013867	PNLDC1	60	61.875	ENSMEUG00000011926	-	64	61.875	Notamacropus_eugenii
ENSOCUG00000013867	PNLDC1	79	97.727	ENSOPRG00000003813	PNLDC1	79	97.727	Ochotona_princeps
ENSOCUG00000013867	PNLDC1	100	84.181	ENSODEG00000008047	PNLDC1	100	84.181	Octodon_degus
ENSOCUG00000013867	PNLDC1	99	57.467	ENSOANG00000012199	PNLDC1	99	59.357	Ornithorhynchus_anatinus
ENSOCUG00000013867	PNLDC1	99	89.015	ENSOGAG00000007331	PNLDC1	99	89.015	Otolemur_garnettii
ENSOCUG00000013867	PNLDC1	100	83.992	ENSOARG00000004585	PNLDC1	100	83.992	Ovis_aries
ENSOCUG00000013867	PNLDC1	100	85.876	ENSPPAG00000026651	PNLDC1	100	85.876	Pan_paniscus
ENSOCUG00000013867	PNLDC1	100	87.571	ENSPPRG00000012854	PNLDC1	100	87.571	Panthera_pardus
ENSOCUG00000013867	PNLDC1	99	82.576	ENSPTIG00000011501	PNLDC1	99	82.576	Panthera_tigris_altaica
ENSOCUG00000013867	PNLDC1	100	85.876	ENSPTRG00000018762	PNLDC1	100	85.876	Pan_troglodytes
ENSOCUG00000013867	PNLDC1	100	87.194	ENSPANG00000022009	PNLDC1	100	87.194	Papio_anubis
ENSOCUG00000013867	PNLDC1	100	87.382	ENSPEMG00000016301	Pnldc1	99	87.382	Peromyscus_maniculatus_bairdii
ENSOCUG00000013867	PNLDC1	83	76.082	ENSPCIG00000023412	PNLDC1	100	76.082	Phascolarctos_cinereus
ENSOCUG00000013867	PNLDC1	100	80.263	ENSPPYG00000017148	PNLDC1	100	80.263	Pongo_abelii
ENSOCUG00000013867	PNLDC1	99	76.038	ENSPCAG00000014169	PNLDC1	99	76.038	Procavia_capensis
ENSOCUG00000013867	PNLDC1	100	86.064	ENSPCOG00000025722	PNLDC1	100	86.064	Propithecus_coquereli
ENSOCUG00000013867	PNLDC1	73	91.169	ENSPVAG00000005325	PNLDC1	73	91.169	Pteropus_vampyrus
ENSOCUG00000013867	PNLDC1	100	86.629	ENSRNOG00000023140	Pnldc1	100	86.629	Rattus_norvegicus
ENSOCUG00000013867	PNLDC1	100	87.006	ENSRBIG00000033806	PNLDC1	100	87.006	Rhinopithecus_bieti
ENSOCUG00000013867	PNLDC1	95	87.154	ENSRROG00000043919	PNLDC1	97	87.154	Rhinopithecus_roxellana
ENSOCUG00000013867	PNLDC1	100	86.252	ENSSBOG00000019135	PNLDC1	100	86.252	Saimiri_boliviensis_boliviensis
ENSOCUG00000013867	PNLDC1	96	75.000	ENSSHAG00000015192	PNLDC1	97	75.000	Sarcophilus_harrisii
ENSOCUG00000013867	PNLDC1	54	66.434	ENSSPUG00000004627	PNLDC1	99	66.518	Sphenodon_punctatus
ENSOCUG00000013867	PNLDC1	96	84.510	ENSSSCG00000004046	PNLDC1	99	84.510	Sus_scrofa
ENSOCUG00000013867	PNLDC1	91	58.557	ENSTGUG00000011418	PNLDC1	99	58.557	Taeniopygia_guttata
ENSOCUG00000013867	PNLDC1	96	76.275	ENSTBEG00000009131	PNLDC1	98	76.275	Tupaia_belangeri
ENSOCUG00000013867	PNLDC1	73	81.865	ENSTTRG00000010409	PNLDC1	73	81.865	Tursiops_truncatus
ENSOCUG00000013867	PNLDC1	99	74.401	ENSUAMG00000015783	PNLDC1	99	74.401	Ursus_americanus
ENSOCUG00000013867	PNLDC1	95	79.532	ENSUMAG00000011903	PNLDC1	99	79.532	Ursus_maritimus
ENSOCUG00000013867	PNLDC1	96	88.650	ENSVVUG00000006586	PNLDC1	99	88.090	Vulpes_vulpes