EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOCUG00000013895 (Gene tree)
Gene ID
100348306
Gene Symbol
RAB5B
Alias
-
Full Name
RAB5B%2C member RAS oncogene family
Gene Type
protein_coding
Species
Oryctolagus_cuniculus
Status
putative
Strand
Plus strand
Length
3919 bases
Position
chr4:39540618-39544536
Accession
100348306
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOCUP00000011949MMR_HSR1PF01926.230.0001211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOCUT00000013893RAB5B-201684XM_002711064ENSOCUP00000011949227 (aa)XP_002711110G1T6C0
Gene Model
Click here to download ENSOCUG00000013895's gene model file
Pathways
Pathway IDPathway NameSource
ocu04014Ras signaling pathwayKEGG
ocu04144EndocytosisKEGG
ocu04145PhagosomeKEGG
ocu04962Vasopressin-regulated water reabsorptionKEGG
ocu05146AmoebiasisKEGG
ocu05152TuberculosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000013895's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOCUG00000013895RAB5B7442.442ENSOCUG00000001645RAB7A8342.442
ENSOCUG00000013895RAB5B8539.801ENSOCUG00000022307RAB189339.801
ENSOCUG00000013895RAB5B8137.895ENSOCUG00000002932RAB33A8237.895
ENSOCUG00000013895RAB5B8534.010ENSOCUG00000025381RAB3D8934.010
ENSOCUG00000013895RAB5B5230.159ENSOCUG00000000108ARL4A6030.159
ENSOCUG00000013895RAB5B7930.556ENSOCUG00000022455-9430.556
ENSOCUG00000013895RAB5B7332.530ENSOCUG00000012106KRAS6732.530
ENSOCUG00000013895RAB5B8641.546ENSOCUG00000005634RAB259441.546
ENSOCUG00000013895RAB5B8440.526ENSOCUG00000000331RAB2B8840.526
ENSOCUG00000013895RAB5B7345.783ENSOCUG00000009428RAB6B8045.783
ENSOCUG00000013895RAB5B7446.108ENSOCUG00000028208RAB11B7244.086
ENSOCUG00000013895RAB5B9582.326ENSOCUG00000012200RAB5A10082.326
ENSOCUG00000013895RAB5B7144.720ENSOCUG00000013654RAB147544.720
ENSOCUG00000013895RAB5B7432.353ENSOCUG00000000650RERG8432.353
ENSOCUG00000013895RAB5B7435.882ENSOCUG00000004254RAB39B8035.882
ENSOCUG00000013895RAB5B7140.373ENSOCUG00000006286-9040.373
ENSOCUG00000013895RAB5B7038.125ENSOCUG00000004816RAB236738.125
ENSOCUG00000013895RAB5B7442.857ENSOCUG00000007580RAB308342.857
ENSOCUG00000013895RAB5B7147.205ENSOCUG00000014755RAB11A7547.205
ENSOCUG00000013895RAB5B7345.181ENSOCUG00000009297RAB6A8045.181
ENSOCUG00000013895RAB5B8645.408ENSOCUG00000008604RAB319845.408
ENSOCUG00000013895RAB5B7833.333ENSOCUG00000013173RHEB9333.333
ENSOCUG00000013895RAB5B8535.323ENSOCUG00000014809RAB9B9735.323
ENSOCUG00000013895RAB5B8543.367ENSOCUG00000017003RAB1A9543.367
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOCUG00000013895RAB5B95100.000ENSG00000111540RAB5B100100.000Homo_sapiens
ENSOCUG00000013895RAB5B9598.618ENSAMEG00000003196RAB5B10098.618Ailuropoda_melanoleuca
ENSOCUG00000013895RAB5B9596.279ENSACAG00000005380RAB5B10096.279Anolis_carolinensis
ENSOCUG00000013895RAB5B10099.559ENSANAG00000033215RAB5B10099.559Aotus_nancymaae
ENSOCUG00000013895RAB5B9599.535ENSBTAG00000014129RAB5B10099.535Bos_taurus
ENSOCUG00000013895RAB5B10099.559ENSCJAG00000041780RAB5B10099.559Callithrix_jacchus
ENSOCUG00000013895RAB5B95100.000ENSCAFG00000000087RAB5B100100.000Canis_familiaris
ENSOCUG00000013895RAB5B95100.000ENSCAFG00020026094RAB5B100100.000Canis_lupus_dingo
ENSOCUG00000013895RAB5B92100.000ENSCHIG00000010333RAB5B96100.000Capra_hircus
ENSOCUG00000013895RAB5B9599.535ENSTSYG00000009576RAB5B10099.535Carlito_syrichta
ENSOCUG00000013895RAB5B95100.000ENSCPOG00000034818RAB5B100100.000Cavia_porcellus
ENSOCUG00000013895RAB5B9599.070ENSCCAG00000019480RAB5B10099.070Cebus_capucinus
ENSOCUG00000013895RAB5B7999.441ENSCATG00000034978RAB5B9899.441Cercocebus_atys
ENSOCUG00000013895RAB5B9599.070ENSCSAG00000005277RAB5B10099.070Chlorocebus_sabaeus
ENSOCUG00000013895RAB5B9596.279ENSCPBG00000012712RAB5B10096.279Chrysemys_picta_bellii
ENSOCUG00000013895RAB5B9599.535ENSCGRG00001000428Rab5b10099.535Cricetulus_griseus_chok1gshd
ENSOCUG00000013895RAB5B9599.535ENSCGRG00000009508-10099.535Cricetulus_griseus_crigri
ENSOCUG00000013895RAB5B95100.000ENSDORG00000025063Rab5b100100.000Dipodomys_ordii
ENSOCUG00000013895RAB5B9599.535ENSECAG00000023306RAB5B10099.535Equus_caballus
ENSOCUG00000013895RAB5B9599.070ENSEEUG00000006745RAB5B10099.070Erinaceus_europaeus
ENSOCUG00000013895RAB5B95100.000ENSFDAG00000008326RAB5B100100.000Fukomys_damarensis
ENSOCUG00000013895RAB5B9599.070ENSHGLG00000005995RAB5B10099.070Heterocephalus_glaber_female
ENSOCUG00000013895RAB5B9599.070ENSHGLG00100012955RAB5B10099.070Heterocephalus_glaber_male
ENSOCUG00000013895RAB5B9598.605ENSSTOG00000010536RAB5B10098.605Ictidomys_tridecemlineatus
ENSOCUG00000013895RAB5B9599.535ENSJJAG00000019506Rab5b10099.535Jaculus_jaculus
ENSOCUG00000013895RAB5B9999.123ENSLAFG00000018009RAB5B9999.123Loxodonta_africana
ENSOCUG00000013895RAB5B9599.070ENSMFAG00000029992RAB5B10099.070Macaca_fascicularis
ENSOCUG00000013895RAB5B9599.070ENSMMUG00000031853RAB5B10099.070Macaca_mulatta
ENSOCUG00000013895RAB5B9599.070ENSMNEG00000005338RAB5B10099.070Macaca_nemestrina
ENSOCUG00000013895RAB5B9599.070ENSMLEG00000034462RAB5B10099.070Mandrillus_leucophaeus
ENSOCUG00000013895RAB5B95100.000ENSMAUG00000011613Rab5b100100.000Mesocricetus_auratus
ENSOCUG00000013895RAB5B9599.535ENSMICG00000011086RAB5B10099.535Microcebus_murinus
ENSOCUG00000013895RAB5B95100.000ENSMUSG00000000711Rab5b100100.000Mus_musculus
ENSOCUG00000013895RAB5B95100.000MGP_PahariEiJ_G0031135Rab5b100100.000Mus_pahari
ENSOCUG00000013895RAB5B9599.535MGP_SPRETEiJ_G0016774Rab5b10099.535Mus_spretus
ENSOCUG00000013895RAB5B9998.246ENSMPUG00000000946RAB5B9398.246Mustela_putorius_furo
ENSOCUG00000013895RAB5B95100.000ENSNLEG00000017570-100100.000Nomascus_leucogenys
ENSOCUG00000013895RAB5B95100.000ENSOPRG00000007883RAB5B100100.000Ochotona_princeps
ENSOCUG00000013895RAB5B9599.535ENSODEG00000003860RAB5B10099.535Octodon_degus
ENSOCUG00000013895RAB5B100100.000ENSOARG00000010651RAB5B100100.000Ovis_aries
ENSOCUG00000013895RAB5B95100.000ENSPPAG00000035431RAB5B100100.000Pan_paniscus
ENSOCUG00000013895RAB5B100100.000ENSPTRG00000005071RAB5B100100.000Pan_troglodytes
ENSOCUG00000013895RAB5B9498.131ENSPANG00000021075RAB5B9798.131Papio_anubis
ENSOCUG00000013895RAB5B95100.000ENSPCOG00000016461RAB5B100100.000Propithecus_coquereli
ENSOCUG00000013895RAB5B9599.070ENSRNOG00000006130Rab5b10099.070Rattus_norvegicus
ENSOCUG00000013895RAB5B9599.070ENSRBIG00000013165RAB5B10099.070Rhinopithecus_bieti
ENSOCUG00000013895RAB5B9599.070ENSRROG00000037973RAB5B10099.070Rhinopithecus_roxellana
ENSOCUG00000013895RAB5B9583.256ENSSBOG00000035419RAB5B10083.256Saimiri_boliviensis_boliviensis
ENSOCUG00000013895RAB5B9598.605ENSSHAG00000007727RAB5B10098.605Sarcophilus_harrisii
ENSOCUG00000013895RAB5B95100.000ENSSARG00000006237RAB5B100100.000Sorex_araneus
ENSOCUG00000013895RAB5B9596.279ENSSPUG00000014873RAB5B10096.279Sphenodon_punctatus
ENSOCUG00000013895RAB5B95100.000ENSTTRG00000015001RAB5B100100.000Tursiops_truncatus
ENSOCUG00000013895RAB5B9599.535ENSUAMG00000014651RAB5B10099.535Ursus_americanus
ENSOCUG00000013895RAB5B9599.535ENSUMAG00000016263RAB5B10099.535Ursus_maritimus
ENSOCUG00000013895RAB5B64100.000ENSVVUG00000022054RAB5B81100.000Vulpes_vulpes

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us