EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000013969 (Gene tree)
Gene ID: 100345123
Gene Symbol: BLM
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 108951 bases
Position: chrGL018738:1138176-1247126
Accession: 100345123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000012010	HRDC	PF00570.23	1.8e-12	1	1
ENSOCUP00000012010	BDHCT	PF08072.11	2.4e-19	1	1
ENSOCUP00000012010	DEAD	PF00270.29	1.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000013971	BLM-201	4733	XM_008275317	ENSOCUP00000012010	1414 (aa)	XP_008273539	G1T6H2

Gene Model

Click here to download ENSOCUG00000013969's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03440	Homologous recombination	KEGG
ocu03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000013969's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000013969	BLM	99	75.123	ENSG00000197299	BLM	99	75.405	Homo_sapiens
ENSOCUG00000013969	BLM	99	73.876	ENSAMEG00000013843	BLM	99	73.876	Ailuropoda_melanoleuca
ENSOCUG00000013969	BLM	68	61.005	ENSACIG00000023762	blm	89	61.005	Amphilophus_citrinellus
ENSOCUG00000013969	BLM	59	60.656	ENSAOCG00000003318	blm	60	61.124	Amphiprion_ocellaris
ENSOCUG00000013969	BLM	68	61.053	ENSAPEG00000018105	blm	88	61.124	Amphiprion_percula
ENSOCUG00000013969	BLM	87	65.944	ENSATEG00000006421	blm	85	65.944	Anabas_testudineus
ENSOCUG00000013969	BLM	80	58.425	ENSAPLG00000006878	BLM	97	58.100	Anas_platyrhynchos
ENSOCUG00000013969	BLM	54	72.186	ENSACAG00000014275	BLM	55	71.964	Anolis_carolinensis
ENSOCUG00000013969	BLM	99	74.560	ENSANAG00000038415	BLM	99	74.718	Aotus_nancymaae
ENSOCUG00000013969	BLM	88	61.621	ENSACLG00000020354	blm	85	61.803	Astatotilapia_calliptera
ENSOCUG00000013969	BLM	81	67.490	ENSAMXG00000016970	blm	87	61.503	Astyanax_mexicanus
ENSOCUG00000013969	BLM	93	75.497	ENSBTAG00000020301	BLM	99	75.920	Bos_taurus
ENSOCUG00000013969	BLM	99	74.542	ENSCJAG00000009803	BLM	99	74.824	Callithrix_jacchus
ENSOCUG00000013969	BLM	99	74.207	ENSCAFG00000012385	BLM	99	74.207	Canis_familiaris
ENSOCUG00000013969	BLM	99	74.137	ENSCAFG00020016111	BLM	89	90.204	Canis_lupus_dingo
ENSOCUG00000013969	BLM	99	74.700	ENSCHIG00000010329	BLM	99	76.159	Capra_hircus
ENSOCUG00000013969	BLM	99	75.053	ENSTSYG00000012368	BLM	99	75.053	Carlito_syrichta
ENSOCUG00000013969	BLM	86	82.421	ENSCAPG00000017976	BLM	99	82.421	Cavia_aperea
ENSOCUG00000013969	BLM	99	72.555	ENSCPOG00000001761	BLM	99	72.555	Cavia_porcellus
ENSOCUG00000013969	BLM	99	74.048	ENSCCAG00000023069	BLM	99	74.048	Cebus_capucinus
ENSOCUG00000013969	BLM	99	74.579	ENSCATG00000040609	BLM	92	90.836	Cercocebus_atys
ENSOCUG00000013969	BLM	99	73.484	ENSCLAG00000012111	BLM	99	73.554	Chinchilla_lanigera
ENSOCUG00000013969	BLM	99	74.372	ENSCSAG00000017040	BLM	99	74.651	Chlorocebus_sabaeus
ENSOCUG00000013969	BLM	91	71.941	ENSCHOG00000006255	BLM	93	72.363	Choloepus_hoffmanni
ENSOCUG00000013969	BLM	89	53.242	ENSCPBG00000025000	BLM	89	73.315	Chrysemys_picta_bellii
ENSOCUG00000013969	BLM	84	88.889	ENSCANG00000034808	BLM	100	88.889	Colobus_angolensis_palliatus
ENSOCUG00000013969	BLM	99	72.382	ENSCGRG00001024897	Blm	99	72.523	Cricetulus_griseus_chok1gshd
ENSOCUG00000013969	BLM	67	67.749	ENSCGRG00000016261	Blm	96	67.749	Cricetulus_griseus_crigri
ENSOCUG00000013969	BLM	79	51.240	ENSCSEG00000013483	blm	59	65.593	Cynoglossus_semilaevis
ENSOCUG00000013969	BLM	87	64.061	ENSDARG00000077089	blm	73	79.412	Danio_rerio
ENSOCUG00000013969	BLM	99	71.888	ENSDNOG00000010159	BLM	99	72.448	Dasypus_novemcinctus
ENSOCUG00000013969	BLM	73	79.502	ENSDORG00000011033	Blm	99	79.693	Dipodomys_ordii
ENSOCUG00000013969	BLM	55	40.224	FBgn0002906	Blm	53	39.952	Drosophila_melanogaster
ENSOCUG00000013969	BLM	81	84.167	ENSETEG00000015019	BLM	86	61.575	Echinops_telfairi
ENSOCUG00000013969	BLM	99	73.118	ENSEASG00005006727	BLM	99	73.272	Equus_asinus_asinus
ENSOCUG00000013969	BLM	99	75.035	ENSECAG00000011405	BLM	99	75.192	Equus_caballus
ENSOCUG00000013969	BLM	98	70.584	ENSEEUG00000001434	BLM	98	70.656	Erinaceus_europaeus
ENSOCUG00000013969	BLM	84	65.239	ENSELUG00000019098	blm	83	64.943	Esox_lucius
ENSOCUG00000013969	BLM	99	73.732	ENSFCAG00000006087	BLM	99	73.732	Felis_catus
ENSOCUG00000013969	BLM	79	65.098	ENSFALG00000010981	BLM	82	70.153	Ficedula_albicollis
ENSOCUG00000013969	BLM	99	66.013	ENSFDAG00000012658	BLM	99	66.433	Fukomys_damarensis
ENSOCUG00000013969	BLM	70	64.834	ENSFHEG00000002553	blm	84	64.962	Fundulus_heteroclitus
ENSOCUG00000013969	BLM	84	62.500	ENSGMOG00000016431	blm	89	60.897	Gadus_morhua
ENSOCUG00000013969	BLM	99	50.958	ENSGALG00000008256	BLM	99	51.023	Gallus_gallus
ENSOCUG00000013969	BLM	55	63.729	ENSGACG00000010863	blm	100	72.401	Gasterosteus_aculeatus
ENSOCUG00000013969	BLM	88	50.602	ENSGAGG00000005383	BLM	86	78.125	Gopherus_agassizii
ENSOCUG00000013969	BLM	99	74.560	ENSGGOG00000007710	BLM	92	91.375	Gorilla_gorilla
ENSOCUG00000013969	BLM	88	61.859	ENSHBUG00000015943	blm	70	61.859	Haplochromis_burtoni
ENSOCUG00000013969	BLM	99	74.225	ENSHGLG00000013231	BLM	99	74.085	Heterocephalus_glaber_female
ENSOCUG00000013969	BLM	73	54.198	ENSHCOG00000011455	blm	83	61.649	Hippocampus_comes
ENSOCUG00000013969	BLM	75	52.714	ENSIPUG00000000529	blm	68	64.549	Ictalurus_punctatus
ENSOCUG00000013969	BLM	99	73.666	ENSSTOG00000005000	BLM	99	73.806	Ictidomys_tridecemlineatus
ENSOCUG00000013969	BLM	65	80.696	ENSJJAG00000016322	Blm	94	81.646	Jaculus_jaculus
ENSOCUG00000013969	BLM	89	61.547	ENSLOCG00000014302	blm	88	61.565	Lepisosteus_oculatus
ENSOCUG00000013969	BLM	99	74.649	ENSMFAG00000042982	BLM	92	91.105	Macaca_fascicularis
ENSOCUG00000013969	BLM	99	74.719	ENSMMUG00000019526	BLM	92	91.105	Macaca_mulatta
ENSOCUG00000013969	BLM	98	71.891	ENSMNEG00000031251	BLM	92	90.836	Macaca_nemestrina
ENSOCUG00000013969	BLM	99	72.261	ENSMLEG00000032934	BLM	99	72.542	Mandrillus_leucophaeus
ENSOCUG00000013969	BLM	55	65.557	ENSMAMG00000008726	blm	57	65.557	Mastacembelus_armatus
ENSOCUG00000013969	BLM	85	52.729	ENSMZEG00005022323	blm	71	62.336	Maylandia_zebra
ENSOCUG00000013969	BLM	99	71.368	ENSMAUG00000008953	Blm	99	71.509	Mesocricetus_auratus
ENSOCUG00000013969	BLM	99	74.736	ENSMICG00000034442	BLM	99	74.867	Microcebus_murinus
ENSOCUG00000013969	BLM	99	71.398	ENSMOCG00000016367	Blm	99	71.539	Microtus_ochrogaster
ENSOCUG00000013969	BLM	80	51.392	ENSMMOG00000006959	blm	99	45.540	Mola_mola
ENSOCUG00000013969	BLM	99	60.478	ENSMODG00000019449	BLM	99	60.724	Monodelphis_domestica
ENSOCUG00000013969	BLM	63	62.222	ENSMALG00000007323	blm	88	62.105	Monopterus_albus
ENSOCUG00000013969	BLM	99	70.168	MGP_CAROLIEiJ_G0029907	Blm	99	70.968	Mus_caroli
ENSOCUG00000013969	BLM	99	70.412	ENSMUSG00000030528	Blm	99	70.830	Mus_musculus
ENSOCUG00000013969	BLM	99	71.529	MGP_PahariEiJ_G0013129	Blm	99	71.529	Mus_pahari
ENSOCUG00000013969	BLM	99	70.420	MGP_SPRETEiJ_G0031009	Blm	99	70.839	Mus_spretus
ENSOCUG00000013969	BLM	84	73.449	ENSMPUG00000015657	BLM	99	73.449	Mustela_putorius_furo
ENSOCUG00000013969	BLM	99	72.382	ENSMLUG00000014697	BLM	99	72.804	Myotis_lucifugus
ENSOCUG00000013969	BLM	99	72.958	ENSNGAG00000001275	Blm	99	73.239	Nannospalax_galili
ENSOCUG00000013969	BLM	88	61.979	ENSNBRG00000019702	blm	87	62.440	Neolamprologus_brichardi
ENSOCUG00000013969	BLM	99	73.291	ENSNLEG00000012087	BLM	99	76.775	Nomascus_leucogenys
ENSOCUG00000013969	BLM	99	57.411	ENSMEUG00000007253	BLM	99	57.641	Notamacropus_eugenii
ENSOCUG00000013969	BLM	95	90.000	ENSOPRG00000011667	BLM	95	90.000	Ochotona_princeps
ENSOCUG00000013969	BLM	73	74.302	ENSODEG00000015373	BLM	99	74.302	Octodon_degus
ENSOCUG00000013969	BLM	79	60.875	ENSONIG00000015193	blm	79	61.449	Oreochromis_niloticus
ENSOCUG00000013969	BLM	53	81.747	ENSOANG00000009316	-	99	81.617	Ornithorhynchus_anatinus
ENSOCUG00000013969	BLM	70	65.212	ENSORLG00000008110	blm	85	65.513	Oryzias_latipes
ENSOCUG00000013969	BLM	70	65.173	ENSORLG00020004812	blm	85	65.473	Oryzias_latipes_hni
ENSOCUG00000013969	BLM	75	62.057	ENSORLG00015018640	blm	78	65.385	Oryzias_latipes_hsok
ENSOCUG00000013969	BLM	79	51.945	ENSOMEG00000023545	blm	87	62.380	Oryzias_melastigma
ENSOCUG00000013969	BLM	99	71.006	ENSOGAG00000005708	BLM	99	71.006	Otolemur_garnettii
ENSOCUG00000013969	BLM	99	73.813	ENSOARG00000012875	BLM	99	73.813	Ovis_aries
ENSOCUG00000013969	BLM	99	74.982	ENSPPAG00000032173	BLM	99	75.264	Pan_paniscus
ENSOCUG00000013969	BLM	99	73.803	ENSPPRG00000002471	BLM	99	73.803	Panthera_pardus
ENSOCUG00000013969	BLM	99	73.347	ENSPTIG00000016168	BLM	99	73.347	Panthera_tigris_altaica
ENSOCUG00000013969	BLM	99	75.123	ENSPTRG00000007460	BLM	99	75.123	Pan_troglodytes
ENSOCUG00000013969	BLM	99	74.719	ENSPANG00000018572	BLM	92	91.105	Papio_anubis
ENSOCUG00000013969	BLM	59	61.827	ENSPKIG00000008954	blm	59	62.280	Paramormyrops_kingsleyae
ENSOCUG00000013969	BLM	56	61.772	ENSPMGG00000006629	blm	99	55.363	Periophthalmus_magnuspinnatus
ENSOCUG00000013969	BLM	99	72.152	ENSPEMG00000017348	Blm	99	72.504	Peromyscus_maniculatus_bairdii
ENSOCUG00000013969	BLM	50	58.881	ENSPMAG00000000445	blm	96	59.301	Petromyzon_marinus
ENSOCUG00000013969	BLM	99	59.320	ENSPCIG00000006609	BLM	99	59.443	Phascolarctos_cinereus
ENSOCUG00000013969	BLM	61	63.928	ENSPFOG00000005059	blm	87	64.615	Poecilia_formosa
ENSOCUG00000013969	BLM	55	64.129	ENSPMEG00000000321	blm	56	64.948	Poecilia_mexicana
ENSOCUG00000013969	BLM	99	72.990	ENSPPYG00000006784	BLM	99	73.202	Pongo_abelii
ENSOCUG00000013969	BLM	73	81.818	ENSPCAG00000008960	BLM	73	81.818	Procavia_capensis
ENSOCUG00000013969	BLM	99	68.332	ENSPCOG00000000439	BLM	99	68.147	Propithecus_coquereli
ENSOCUG00000013969	BLM	80	95.177	ENSPVAG00000011642	BLM	83	95.177	Pteropus_vampyrus
ENSOCUG00000013969	BLM	99	38.431	ENSPNYG00000010956	blm	57	50.835	Pundamilia_nyererei
ENSOCUG00000013969	BLM	99	45.811	ENSPNAG00000011714	blm	86	63.287	Pygocentrus_nattereri
ENSOCUG00000013969	BLM	99	70.675	ENSRNOG00000011213	Blm	99	70.605	Rattus_norvegicus
ENSOCUG00000013969	BLM	99	73.104	ENSRBIG00000029656	BLM	92	90.027	Rhinopithecus_bieti
ENSOCUG00000013969	BLM	99	74.700	ENSRROG00000037871	BLM	92	90.027	Rhinopithecus_roxellana
ENSOCUG00000013969	BLM	91	73.936	ENSSBOG00000030957	BLM	99	74.202	Saimiri_boliviensis_boliviensis
ENSOCUG00000013969	BLM	99	59.736	ENSSHAG00000007988	BLM	99	60.125	Sarcophilus_harrisii
ENSOCUG00000013969	BLM	58	60.689	ENSSFOG00015015462	blm	67	60.689	Scleropages_formosus
ENSOCUG00000013969	BLM	86	50.512	ENSSMAG00000001120	blm	99	45.831	Scophthalmus_maximus
ENSOCUG00000013969	BLM	79	51.186	ENSSDUG00000010955	blm	56	64.796	Seriola_dumerili
ENSOCUG00000013969	BLM	82	54.348	ENSSLDG00000000634	blm	99	45.732	Seriola_lalandi_dorsalis
ENSOCUG00000013969	BLM	90	70.421	ENSSARG00000006398	BLM	95	70.604	Sorex_araneus
ENSOCUG00000013969	BLM	79	55.066	ENSSPUG00000000013	BLM	96	54.850	Sphenodon_punctatus
ENSOCUG00000013969	BLM	68	60.895	ENSSPAG00000013999	blm	88	60.895	Stegastes_partitus
ENSOCUG00000013969	BLM	99	74.336	ENSSSCG00000001816	BLM	99	75.109	Sus_scrofa
ENSOCUG00000013969	BLM	79	51.610	ENSTGUG00000009959	-	99	51.361	Taeniopygia_guttata
ENSOCUG00000013969	BLM	88	61.538	ENSTNIG00000019246	blm	88	61.418	Tetraodon_nigroviridis
ENSOCUG00000013969	BLM	79	79.886	ENSTBEG00000006706	BLM	81	79.886	Tupaia_belangeri
ENSOCUG00000013969	BLM	99	74.736	ENSTTRG00000016386	BLM	99	74.666	Tursiops_truncatus
ENSOCUG00000013969	BLM	99	73.873	ENSUMAG00000009105	BLM	97	90.612	Ursus_maritimus
ENSOCUG00000013969	BLM	99	71.921	ENSVPAG00000000085	BLM	99	71.780	Vicugna_pacos
ENSOCUG00000013969	BLM	99	73.045	ENSVVUG00000006402	BLM	99	74.000	Vulpes_vulpes
ENSOCUG00000013969	BLM	99	51.348	ENSXETG00000007847	blm	83	72.809	Xenopus_tropicalis
ENSOCUG00000013969	BLM	61	60.567	ENSXCOG00000020227	blm	84	60.825	Xiphophorus_couchianus
ENSOCUG00000013969	BLM	84	63.707	ENSXMAG00000002951	blm	85	64.093	Xiphophorus_maculatus