EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000014042 (Gene tree)
Gene ID: 100341600
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 8752 bases
Position: chr4:9574725-9583476
Accession: 100341600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000012073	LSM	PF01423.22	5.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000014045	-	800	XM_008256229	ENSOCUP00000012073	240 (aa)	XP_008254451	G1T6M4

Gene Model

Click here to download ENSOCUG00000014042's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG
ocu05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000014042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000014042	-	100	97.500	ENSOCUG00000028215	-	100	97.500
ENSOCUG00000014042	-	75	93.296	ENSOCUG00000022423	-	86	96.429
ENSOCUG00000014042	-	89	91.589	ENSOCUG00000003532	-	70	96.429
ENSOCUG00000014042	-	89	72.300	ENSOCUG00000026813	-	63	70.946
ENSOCUG00000014042	-	90	95.349	ENSOCUG00000021456	-	78	96.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000014042	-	100	99.583	ENSG00000125835	SNRPB	100	99.583	Homo_sapiens
ENSOCUG00000014042	-	75	92.818	ENSAPOG00000019606	snrpb	56	94.643	Acanthochromis_polyacanthus
ENSOCUG00000014042	-	99	99.582	ENSAMEG00000011353	SNRPB	98	99.582	Ailuropoda_melanoleuca
ENSOCUG00000014042	-	73	92.571	ENSACIG00000014480	snrpb	71	94.444	Amphilophus_citrinellus
ENSOCUG00000014042	-	75	92.818	ENSAOCG00000006876	snrpb	69	94.643	Amphiprion_ocellaris
ENSOCUG00000014042	-	75	92.818	ENSAPEG00000021585	snrpb	71	94.643	Amphiprion_percula
ENSOCUG00000014042	-	75	92.265	ENSATEG00000009836	snrpb	69	94.048	Anabas_testudineus
ENSOCUG00000014042	-	89	94.836	ENSACAG00000002053	SNRPB	92	94.836	Anolis_carolinensis
ENSOCUG00000014042	-	100	99.583	ENSANAG00000024443	-	100	99.583	Aotus_nancymaae
ENSOCUG00000014042	-	96	92.208	ENSANAG00000036271	-	76	92.593	Aotus_nancymaae
ENSOCUG00000014042	-	75	92.818	ENSACLG00000014707	snrpb	69	94.643	Astatotilapia_calliptera
ENSOCUG00000014042	-	76	93.443	ENSAMXG00000029434	snrpb	76	94.536	Astyanax_mexicanus
ENSOCUG00000014042	-	95	100.000	ENSBTAG00000001038	SNRPB	99	100.000	Bos_taurus
ENSOCUG00000014042	-	89	92.056	ENSCJAG00000023097	-	79	92.063	Callithrix_jacchus
ENSOCUG00000014042	-	95	99.563	ENSCJAG00000020971	-	99	99.563	Callithrix_jacchus
ENSOCUG00000014042	-	78	87.895	ENSCAFG00000031109	-	79	84.211	Canis_familiaris
ENSOCUG00000014042	-	95	99.563	ENSCAFG00000006693	-	99	99.563	Canis_familiaris
ENSOCUG00000014042	-	100	99.583	ENSCAFG00020016981	-	100	99.583	Canis_lupus_dingo
ENSOCUG00000014042	-	95	100.000	ENSCHIG00000025449	-	99	100.000	Capra_hircus
ENSOCUG00000014042	-	97	75.431	ENSTSYG00000032303	-	55	79.333	Carlito_syrichta
ENSOCUG00000014042	-	95	99.563	ENSTSYG00000014498	-	99	99.563	Carlito_syrichta
ENSOCUG00000014042	-	99	99.582	ENSCAPG00000012669	SNRPB	99	99.582	Cavia_aperea
ENSOCUG00000014042	-	95	99.563	ENSCPOG00000039408	SNRPB	99	99.563	Cavia_porcellus
ENSOCUG00000014042	-	100	99.583	ENSCCAG00000026002	SNRPB	100	99.583	Cebus_capucinus
ENSOCUG00000014042	-	53	88.189	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSOCUG00000014042	-	95	99.563	ENSCATG00000030230	SNRPB	99	99.563	Cercocebus_atys
ENSOCUG00000014042	-	100	98.333	ENSCLAG00000012442	SNRPB	100	98.333	Chinchilla_lanigera
ENSOCUG00000014042	-	95	99.563	ENSCSAG00000010840	SNRPB	99	99.563	Chlorocebus_sabaeus
ENSOCUG00000014042	-	100	96.250	ENSCPBG00000026801	SNRPB	100	96.250	Chrysemys_picta_bellii
ENSOCUG00000014042	-	100	99.583	ENSCANG00000019461	SNRPB	100	99.583	Colobus_angolensis_palliatus
ENSOCUG00000014042	-	95	99.563	ENSCGRG00001023046	Snrpb	99	99.563	Cricetulus_griseus_chok1gshd
ENSOCUG00000014042	-	92	99.548	ENSCGRG00000010423	Snrpb	98	99.548	Cricetulus_griseus_crigri
ENSOCUG00000014042	-	76	92.350	ENSCSEG00000020328	snrpb	70	94.643	Cynoglossus_semilaevis
ENSOCUG00000014042	-	70	92.857	ENSDARG00000011125	snrpb	76	94.536	Danio_rerio
ENSOCUG00000014042	-	92	95.023	ENSDNOG00000007896	-	91	95.023	Dasypus_novemcinctus
ENSOCUG00000014042	-	100	99.583	ENSDNOG00000015545	-	100	99.583	Dasypus_novemcinctus
ENSOCUG00000014042	-	96	100.000	ENSDORG00000029558	Snrpb	100	100.000	Dipodomys_ordii
ENSOCUG00000014042	-	62	70.470	FBgn0262601	SmB	74	70.470	Drosophila_melanogaster
ENSOCUG00000014042	-	76	79.235	ENSETEG00000006830	SNRPB	80	79.235	Echinops_telfairi
ENSOCUG00000014042	-	78	78.495	ENSEBUG00000007467	SNRPB	62	88.591	Eptatretus_burgeri
ENSOCUG00000014042	-	95	99.127	ENSEASG00005012991	SNRPB	99	99.127	Equus_asinus_asinus
ENSOCUG00000014042	-	95	99.563	ENSECAG00000011944	SNRPB	99	99.563	Equus_caballus
ENSOCUG00000014042	-	97	97.845	ENSEEUG00000015568	SNRPB	82	97.845	Erinaceus_europaeus
ENSOCUG00000014042	-	60	95.862	ENSELUG00000014564	snrpb	71	93.210	Esox_lucius
ENSOCUG00000014042	-	95	99.563	ENSFCAG00000034090	-	99	99.563	Felis_catus
ENSOCUG00000014042	-	89	95.305	ENSFALG00000004866	SNRPB	92	95.305	Ficedula_albicollis
ENSOCUG00000014042	-	99	99.582	ENSFDAG00000009937	SNRPB	99	99.563	Fukomys_damarensis
ENSOCUG00000014042	-	92	95.475	ENSGALG00000035421	SNRPN	92	95.475	Gallus_gallus
ENSOCUG00000014042	-	71	92.982	ENSGAFG00000019558	snrpb	72	94.012	Gambusia_affinis
ENSOCUG00000014042	-	76	91.257	ENSGACG00000003262	snrpb	70	94.643	Gasterosteus_aculeatus
ENSOCUG00000014042	-	100	96.250	ENSGAGG00000001308	SNRPB	100	96.250	Gopherus_agassizii
ENSOCUG00000014042	-	95	99.563	ENSGGOG00000016138	SNRPB	99	99.563	Gorilla_gorilla
ENSOCUG00000014042	-	75	92.818	ENSHBUG00000008369	snrpb	69	94.643	Haplochromis_burtoni
ENSOCUG00000014042	-	95	99.563	ENSHGLG00000016241	-	99	99.563	Heterocephalus_glaber_female
ENSOCUG00000014042	-	63	90.000	ENSHGLG00000016505	-	72	90.000	Heterocephalus_glaber_female
ENSOCUG00000014042	-	63	90.000	ENSHGLG00100004178	-	72	90.000	Heterocephalus_glaber_male
ENSOCUG00000014042	-	100	99.583	ENSHGLG00100012877	-	100	99.583	Heterocephalus_glaber_male
ENSOCUG00000014042	-	76	92.350	ENSHCOG00000014888	snrpb	70	94.643	Hippocampus_comes
ENSOCUG00000014042	-	70	92.857	ENSIPUG00000024569	SNRPB	76	94.536	Ictalurus_punctatus
ENSOCUG00000014042	-	90	81.944	ENSSTOG00000027821	-	62	99.265	Ictidomys_tridecemlineatus
ENSOCUG00000014042	-	100	97.917	ENSSTOG00000033664	-	100	97.917	Ictidomys_tridecemlineatus
ENSOCUG00000014042	-	95	99.563	ENSJJAG00000024170	Snrpb	99	99.563	Jaculus_jaculus
ENSOCUG00000014042	-	72	94.186	ENSKMAG00000014494	snrpb	68	95.238	Kryptolebias_marmoratus
ENSOCUG00000014042	-	76	92.350	ENSLBEG00000005678	snrpb	70	94.643	Labrus_bergylta
ENSOCUG00000014042	-	92	92.760	ENSLACG00000011459	SNRPB	92	92.760	Latimeria_chalumnae
ENSOCUG00000014042	-	70	94.048	ENSLOCG00000002687	snrpb	76	95.082	Lepisosteus_oculatus
ENSOCUG00000014042	-	95	96.491	ENSLAFG00000017588	SNRPB	99	96.491	Loxodonta_africana
ENSOCUG00000014042	-	95	99.563	ENSMFAG00000038756	SNRPB	99	99.563	Macaca_fascicularis
ENSOCUG00000014042	-	95	99.563	ENSMMUG00000010050	SNRPB	99	99.563	Macaca_mulatta
ENSOCUG00000014042	-	95	99.563	ENSMNEG00000027954	SNRPB	99	99.563	Macaca_nemestrina
ENSOCUG00000014042	-	100	99.583	ENSMLEG00000022346	SNRPB	100	99.583	Mandrillus_leucophaeus
ENSOCUG00000014042	-	75	92.778	ENSMAMG00000009294	snrpb	67	94.611	Mastacembelus_armatus
ENSOCUG00000014042	-	75	92.818	ENSMZEG00005011856	snrpb	69	94.643	Maylandia_zebra
ENSOCUG00000014042	-	95	100.000	ENSMICG00000016519	SNRPB	99	100.000	Microcebus_murinus
ENSOCUG00000014042	-	99	83.193	ENSMICG00000015983	-	85	90.323	Microcebus_murinus
ENSOCUG00000014042	-	95	99.127	ENSMOCG00000002892	-	99	99.127	Microtus_ochrogaster
ENSOCUG00000014042	-	82	80.102	ENSMOCG00000021362	-	83	75.000	Microtus_ochrogaster
ENSOCUG00000014042	-	76	92.308	ENSMMOG00000013226	snrpb	71	94.611	Mola_mola
ENSOCUG00000014042	-	75	92.265	ENSMALG00000020839	snrpb	56	94.048	Monopterus_albus
ENSOCUG00000014042	-	95	99.127	MGP_CAROLIEiJ_G0024293	Snrpb	99	99.127	Mus_caroli
ENSOCUG00000014042	-	95	99.127	ENSMUSG00000027404	Snrpb	99	99.127	Mus_musculus
ENSOCUG00000014042	-	95	99.127	MGP_PahariEiJ_G0025738	Snrpb	99	99.127	Mus_pahari
ENSOCUG00000014042	-	95	99.127	MGP_SPRETEiJ_G0025213	Snrpb	99	99.127	Mus_spretus
ENSOCUG00000014042	-	95	99.563	ENSMPUG00000009283	SNRPB	99	99.563	Mustela_putorius_furo
ENSOCUG00000014042	-	100	97.083	ENSMLUG00000016951	SNRPB	100	97.083	Myotis_lucifugus
ENSOCUG00000014042	-	95	99.563	ENSNGAG00000012051	Snrpb	99	99.563	Nannospalax_galili
ENSOCUG00000014042	-	75	90.055	ENSNBRG00000006353	snrpb	62	93.293	Neolamprologus_brichardi
ENSOCUG00000014042	-	100	99.583	ENSNLEG00000029067	SNRPB	100	99.583	Nomascus_leucogenys
ENSOCUG00000014042	-	94	96.889	ENSMEUG00000015625	SNRPB	100	96.889	Notamacropus_eugenii
ENSOCUG00000014042	-	100	95.000	ENSODEG00000016060	-	100	95.000	Octodon_degus
ENSOCUG00000014042	-	99	95.816	ENSODEG00000004305	-	99	99.563	Octodon_degus
ENSOCUG00000014042	-	75	92.818	ENSONIG00000000248	snrpb	69	94.643	Oreochromis_niloticus
ENSOCUG00000014042	-	75	92.265	ENSORLG00000021862	snrpb	69	94.643	Oryzias_latipes
ENSOCUG00000014042	-	100	99.583	ENSOGAG00000016149	SNRPB	100	99.583	Otolemur_garnettii
ENSOCUG00000014042	-	95	100.000	ENSOARG00000006740	SNRPB	99	100.000	Ovis_aries
ENSOCUG00000014042	-	95	99.563	ENSPPAG00000036314	SNRPB	99	99.563	Pan_paniscus
ENSOCUG00000014042	-	100	99.583	ENSPPRG00000003233	-	100	99.583	Panthera_pardus
ENSOCUG00000014042	-	99	99.582	ENSPTIG00000007468	SNRPB	99	99.582	Panthera_tigris_altaica
ENSOCUG00000014042	-	95	99.563	ENSPTRG00000013176	SNRPB	99	99.563	Pan_troglodytes
ENSOCUG00000014042	-	100	99.583	ENSPANG00000020362	SNRPB	100	99.583	Papio_anubis
ENSOCUG00000014042	-	70	92.262	ENSPKIG00000002865	snrpb	76	93.443	Paramormyrops_kingsleyae
ENSOCUG00000014042	-	99	96.234	ENSPSIG00000014125	SNRPB	98	96.234	Pelodiscus_sinensis
ENSOCUG00000014042	-	74	90.449	ENSPMGG00000016349	snrpb	69	92.025	Periophthalmus_magnuspinnatus
ENSOCUG00000014042	-	95	99.563	ENSPEMG00000007948	Snrpb	99	99.563	Peromyscus_maniculatus_bairdii
ENSOCUG00000014042	-	99	97.490	ENSPCIG00000004694	SNRPB	99	97.490	Phascolarctos_cinereus
ENSOCUG00000014042	-	95	99.563	ENSPPYG00000010841	SNRPB	99	99.563	Pongo_abelii
ENSOCUG00000014042	-	95	99.563	ENSPCOG00000013686	SNRPB	99	99.563	Propithecus_coquereli
ENSOCUG00000014042	-	95	98.238	ENSPVAG00000017013	SNRPB	80	98.238	Pteropus_vampyrus
ENSOCUG00000014042	-	75	92.818	ENSPNYG00000014788	snrpb	69	94.643	Pundamilia_nyererei
ENSOCUG00000014042	-	76	93.443	ENSPNAG00000016126	snrpb	76	95.082	Pygocentrus_nattereri
ENSOCUG00000014042	-	95	99.563	ENSRNOG00000006961	Snrpb	99	99.563	Rattus_norvegicus
ENSOCUG00000014042	-	100	99.167	ENSRBIG00000040505	SNRPB	100	99.167	Rhinopithecus_bieti
ENSOCUG00000014042	-	100	99.583	ENSRROG00000036094	SNRPB	100	99.583	Rhinopithecus_roxellana
ENSOCUG00000014042	-	100	99.583	ENSSBOG00000027310	SNRPB	100	99.583	Saimiri_boliviensis_boliviensis
ENSOCUG00000014042	-	100	97.917	ENSSHAG00000010394	SNRPB	100	97.917	Sarcophilus_harrisii
ENSOCUG00000014042	-	70	92.262	ENSSFOG00015002870	snrpb	76	93.443	Scleropages_formosus
ENSOCUG00000014042	-	76	91.803	ENSSMAG00000006766	snrpb	70	94.048	Scophthalmus_maximus
ENSOCUG00000014042	-	75	92.818	ENSSDUG00000018539	snrpb	69	94.643	Seriola_dumerili
ENSOCUG00000014042	-	75	92.818	ENSSLDG00000022391	snrpb	69	94.643	Seriola_lalandi_dorsalis
ENSOCUG00000014042	-	92	87.727	ENSSARG00000003084	SNRPB	74	80.220	Sorex_araneus
ENSOCUG00000014042	-	99	96.234	ENSSPUG00000015659	SNRPB	100	96.234	Sphenodon_punctatus
ENSOCUG00000014042	-	75	92.818	ENSSPAG00000021992	snrpb	69	94.643	Stegastes_partitus
ENSOCUG00000014042	-	95	100.000	ENSSSCG00000040857	-	99	100.000	Sus_scrofa
ENSOCUG00000014042	-	95	80.349	ENSSSCG00000011966	-	91	76.415	Sus_scrofa
ENSOCUG00000014042	-	74	79.661	ENSTGUG00000005684	SNRPB	59	96.429	Taeniopygia_guttata
ENSOCUG00000014042	-	76	91.803	ENSTRUG00000023094	snrpb	72	94.048	Takifugu_rubripes
ENSOCUG00000014042	-	76	91.803	ENSTNIG00000002991	snrpb	70	94.048	Tetraodon_nigroviridis
ENSOCUG00000014042	-	75	99.444	ENSUAMG00000005984	-	88	99.454	Ursus_americanus
ENSOCUG00000014042	-	57	99.270	ENSUMAG00000002123	-	63	99.270	Ursus_maritimus
ENSOCUG00000014042	-	100	76.250	ENSVVUG00000010086	-	85	80.612	Vulpes_vulpes
ENSOCUG00000014042	-	62	43.713	ENSVVUG00000018297	-	52	43.713	Vulpes_vulpes
ENSOCUG00000014042	-	100	99.167	ENSVVUG00000025654	-	100	99.167	Vulpes_vulpes
ENSOCUG00000014042	-	92	95.023	ENSXETG00000027266	snrpb	93	95.023	Xenopus_tropicalis
ENSOCUG00000014042	-	86	67.476	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus