EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000014151 (Gene tree)
Gene ID: 100353827
Gene Symbol: PRPF6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 44819 bases
Position: chrGL019070:140678-185496
Accession: 100353827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000012164	PRP1_N	PF06424.12	6e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000014155	PRPF6-201	2796	XM_008252551	ENSOCUP00000012164	932 (aa)	XP_008250773	G1T6T8

Gene Model

Click here to download ENSOCUG00000014151's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000014151's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000014151	PRPF6	100	96.137	ENSG00000101161	PRPF6	99	96.137	Homo_sapiens
ENSOCUG00000014151	PRPF6	100	90.880	ENSAPOG00000010395	prpf6	95	91.309	Acanthochromis_polyacanthus
ENSOCUG00000014151	PRPF6	100	96.352	ENSAMEG00000001916	PRPF6	98	96.352	Ailuropoda_melanoleuca
ENSOCUG00000014151	PRPF6	100	90.558	ENSACIG00000019862	prpf6	95	90.987	Amphilophus_citrinellus
ENSOCUG00000014151	PRPF6	100	90.773	ENSAOCG00000012988	prpf6	95	91.202	Amphiprion_ocellaris
ENSOCUG00000014151	PRPF6	100	84.120	ENSAPEG00000008301	prpf6	99	84.549	Amphiprion_percula
ENSOCUG00000014151	PRPF6	100	90.236	ENSATEG00000005581	prpf6	95	90.665	Anabas_testudineus
ENSOCUG00000014151	PRPF6	100	96.352	ENSACAG00000006464	PRPF6	94	96.352	Anolis_carolinensis
ENSOCUG00000014151	PRPF6	100	96.245	ENSANAG00000012661	PRPF6	99	96.548	Aotus_nancymaae
ENSOCUG00000014151	PRPF6	100	90.451	ENSACLG00000025875	prpf6	95	90.880	Astatotilapia_calliptera
ENSOCUG00000014151	PRPF6	100	91.202	ENSAMXG00000001929	prpf6	95	91.631	Astyanax_mexicanus
ENSOCUG00000014151	PRPF6	100	96.674	ENSBTAG00000011656	PRPF6	99	96.674	Bos_taurus
ENSOCUG00000014151	PRPF6	100	96.245	ENSCJAG00000010616	PRPF6	99	96.245	Callithrix_jacchus
ENSOCUG00000014151	PRPF6	100	96.888	ENSCAFG00000013165	PRPF6	99	96.888	Canis_familiaris
ENSOCUG00000014151	PRPF6	100	96.888	ENSCAFG00020002050	PRPF6	99	96.888	Canis_lupus_dingo
ENSOCUG00000014151	PRPF6	100	96.674	ENSCHIG00000018187	PRPF6	99	96.674	Capra_hircus
ENSOCUG00000014151	PRPF6	100	97.103	ENSTSYG00000007814	PRPF6	99	97.103	Carlito_syrichta
ENSOCUG00000014151	PRPF6	98	96.510	ENSCAPG00000015077	PRPF6	100	96.510	Cavia_aperea
ENSOCUG00000014151	PRPF6	100	97.103	ENSCPOG00000007518	PRPF6	99	97.103	Cavia_porcellus
ENSOCUG00000014151	PRPF6	100	92.918	ENSCCAG00000024564	PRPF6	99	93.026	Cebus_capucinus
ENSOCUG00000014151	PRPF6	100	96.030	ENSCATG00000037473	PRPF6	99	96.030	Cercocebus_atys
ENSOCUG00000014151	PRPF6	100	93.026	ENSCLAG00000003854	PRPF6	99	93.026	Chinchilla_lanigera
ENSOCUG00000014151	PRPF6	100	91.151	ENSCSAG00000016742	PRPF6	99	91.151	Chlorocebus_sabaeus
ENSOCUG00000014151	PRPF6	86	80.000	ENSCHOG00000003315	-	98	79.669	Choloepus_hoffmanni
ENSOCUG00000014151	PRPF6	100	96.352	ENSCPBG00000013964	PRPF6	95	96.352	Chrysemys_picta_bellii
ENSOCUG00000014151	PRPF6	100	73.056	ENSCING00000008817	-	98	73.056	Ciona_intestinalis
ENSOCUG00000014151	PRPF6	100	96.030	ENSCANG00000038230	PRPF6	99	96.030	Colobus_angolensis_palliatus
ENSOCUG00000014151	PRPF6	100	97.103	ENSCGRG00001022666	Prpf6	99	97.103	Cricetulus_griseus_chok1gshd
ENSOCUG00000014151	PRPF6	100	85.086	ENSCSEG00000018561	prpf6	99	85.515	Cynoglossus_semilaevis
ENSOCUG00000014151	PRPF6	100	90.880	ENSCVAG00000010550	prpf6	95	91.309	Cyprinodon_variegatus
ENSOCUG00000014151	PRPF6	100	90.665	ENSDARG00000091367	prpf6	98	91.094	Danio_rerio
ENSOCUG00000014151	PRPF6	100	96.567	ENSDNOG00000040544	PRPF6	99	96.567	Dasypus_novemcinctus
ENSOCUG00000014151	PRPF6	92	96.612	ENSDORG00000005406	Prpf6	100	96.612	Dipodomys_ordii
ENSOCUG00000014151	PRPF6	99	71.553	FBgn0036828	CG6841	97	71.861	Drosophila_melanogaster
ENSOCUG00000014151	PRPF6	85	95.322	ENSETEG00000004447	PRPF6	84	95.322	Echinops_telfairi
ENSOCUG00000014151	PRPF6	100	85.882	ENSEBUG00000008835	prpf6	99	85.882	Eptatretus_burgeri
ENSOCUG00000014151	PRPF6	100	96.888	ENSEASG00005023115	PRPF6	99	96.888	Equus_asinus_asinus
ENSOCUG00000014151	PRPF6	100	92.597	ENSECAG00000013983	PRPF6	99	92.597	Equus_caballus
ENSOCUG00000014151	PRPF6	88	94.919	ENSEEUG00000000180	PRPF6	78	94.919	Erinaceus_europaeus
ENSOCUG00000014151	PRPF6	100	89.592	ENSELUG00000001945	prpf6	92	89.592	Esox_lucius
ENSOCUG00000014151	PRPF6	100	96.888	ENSFCAG00000001183	PRPF6	99	96.888	Felis_catus
ENSOCUG00000014151	PRPF6	100	88.841	ENSFALG00000006046	-	96	88.841	Ficedula_albicollis
ENSOCUG00000014151	PRPF6	100	96.030	ENSFALG00000010326	-	96	96.030	Ficedula_albicollis
ENSOCUG00000014151	PRPF6	98	97.710	ENSFDAG00000006451	PRPF6	100	97.619	Fukomys_damarensis
ENSOCUG00000014151	PRPF6	100	91.416	ENSFHEG00000000560	prpf6	95	91.416	Fundulus_heteroclitus
ENSOCUG00000014151	PRPF6	100	87.620	ENSGMOG00000015622	prpf6	98	87.620	Gadus_morhua
ENSOCUG00000014151	PRPF6	100	96.030	ENSGALG00000006001	PRPF6	99	96.030	Gallus_gallus
ENSOCUG00000014151	PRPF6	100	86.052	ENSGAFG00000021109	prpf6	95	86.481	Gambusia_affinis
ENSOCUG00000014151	PRPF6	100	89.270	ENSGACG00000002576	prpf6	98	89.270	Gasterosteus_aculeatus
ENSOCUG00000014151	PRPF6	100	96.245	ENSGAGG00000008653	PRPF6	95	96.245	Gopherus_agassizii
ENSOCUG00000014151	PRPF6	100	96.137	ENSGGOG00000016876	PRPF6	96	99.469	Gorilla_gorilla
ENSOCUG00000014151	PRPF6	100	90.451	ENSHBUG00000004496	prpf6	95	90.880	Haplochromis_burtoni
ENSOCUG00000014151	PRPF6	100	96.888	ENSHGLG00000009222	PRPF6	99	96.888	Heterocephalus_glaber_female
ENSOCUG00000014151	PRPF6	98	97.492	ENSHGLG00100016600	PRPF6	100	97.492	Heterocephalus_glaber_male
ENSOCUG00000014151	PRPF6	100	89.378	ENSHCOG00000011513	prpf6	95	89.807	Hippocampus_comes
ENSOCUG00000014151	PRPF6	100	91.845	ENSIPUG00000004912	prpf6	95	91.845	Ictalurus_punctatus
ENSOCUG00000014151	PRPF6	100	94.319	ENSSTOG00000002922	PRPF6	99	94.319	Ictidomys_tridecemlineatus
ENSOCUG00000014151	PRPF6	100	97.103	ENSJJAG00000000836	Prpf6	99	97.103	Jaculus_jaculus
ENSOCUG00000014151	PRPF6	100	90.343	ENSKMAG00000017800	prpf6	95	90.773	Kryptolebias_marmoratus
ENSOCUG00000014151	PRPF6	100	90.021	ENSLBEG00000012582	prpf6	95	90.021	Labrus_bergylta
ENSOCUG00000014151	PRPF6	100	92.918	ENSLOCG00000004827	prpf6	94	93.348	Lepisosteus_oculatus
ENSOCUG00000014151	PRPF6	100	96.459	ENSLAFG00000005272	PRPF6	99	96.459	Loxodonta_africana
ENSOCUG00000014151	PRPF6	100	96.030	ENSMFAG00000037542	PRPF6	96	99.469	Macaca_fascicularis
ENSOCUG00000014151	PRPF6	92	99.133	ENSMMUG00000015558	PRPF6	98	99.133	Macaca_mulatta
ENSOCUG00000014151	PRPF6	100	81.711	ENSMNEG00000045555	PRPF6	99	81.711	Macaca_nemestrina
ENSOCUG00000014151	PRPF6	100	90.558	ENSMAMG00000010718	prpf6	95	90.987	Mastacembelus_armatus
ENSOCUG00000014151	PRPF6	95	90.476	ENSMZEG00005026539	prpf6	100	90.930	Maylandia_zebra
ENSOCUG00000014151	PRPF6	100	90.139	ENSMZEG00005015261	-	98	90.568	Maylandia_zebra
ENSOCUG00000014151	PRPF6	98	96.619	ENSMGAG00000006634	PRPF6	100	96.619	Meleagris_gallopavo
ENSOCUG00000014151	PRPF6	100	97.210	ENSMAUG00000013969	Prpf6	99	97.210	Mesocricetus_auratus
ENSOCUG00000014151	PRPF6	88	97.324	ENSMICG00000017793	PRPF6	99	97.324	Microcebus_murinus
ENSOCUG00000014151	PRPF6	100	97.318	ENSMOCG00000001701	Prpf6	99	97.318	Microtus_ochrogaster
ENSOCUG00000014151	PRPF6	100	89.700	ENSMMOG00000020419	prpf6	99	90.129	Mola_mola
ENSOCUG00000014151	PRPF6	99	95.684	ENSMODG00000017051	PRPF6	99	95.684	Monodelphis_domestica
ENSOCUG00000014151	PRPF6	99	90.655	ENSMALG00000000089	prpf6	100	90.655	Monopterus_albus
ENSOCUG00000014151	PRPF6	100	90.558	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSOCUG00000014151	PRPF6	100	97.210	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSOCUG00000014151	PRPF6	100	97.210	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSOCUG00000014151	PRPF6	100	97.210	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSOCUG00000014151	PRPF6	92	97.013	ENSMPUG00000008673	PRPF6	99	97.013	Mustela_putorius_furo
ENSOCUG00000014151	PRPF6	100	97.210	ENSNGAG00000003365	Prpf6	99	97.210	Nannospalax_galili
ENSOCUG00000014151	PRPF6	100	90.558	ENSNBRG00000015025	prpf6	95	90.987	Neolamprologus_brichardi
ENSOCUG00000014151	PRPF6	100	96.030	ENSNLEG00000010208	PRPF6	99	96.030	Nomascus_leucogenys
ENSOCUG00000014151	PRPF6	100	86.948	ENSMEUG00000009824	-	89	87.154	Notamacropus_eugenii
ENSOCUG00000014151	PRPF6	100	91.416	ENSODEG00000004841	PRPF6	99	91.416	Octodon_degus
ENSOCUG00000014151	PRPF6	100	90.451	ENSONIG00000017406	prpf6	95	90.880	Oreochromis_niloticus
ENSOCUG00000014151	PRPF6	100	96.567	ENSOANG00000004920	PRPF6	99	96.567	Ornithorhynchus_anatinus
ENSOCUG00000014151	PRPF6	100	90.236	ENSORLG00000009592	prpf6	95	90.236	Oryzias_latipes
ENSOCUG00000014151	PRPF6	100	90.343	ENSORLG00020001458	prpf6	95	90.343	Oryzias_latipes_hni
ENSOCUG00000014151	PRPF6	100	90.343	ENSORLG00015018762	prpf6	95	90.343	Oryzias_latipes_hsok
ENSOCUG00000014151	PRPF6	100	90.236	ENSOMEG00000012174	prpf6	95	90.665	Oryzias_melastigma
ENSOCUG00000014151	PRPF6	100	89.496	ENSOGAG00000007573	PRPF6	99	89.496	Otolemur_garnettii
ENSOCUG00000014151	PRPF6	99	96.670	ENSOARG00000008776	PRPF6	98	96.670	Ovis_aries
ENSOCUG00000014151	PRPF6	100	96.137	ENSPPAG00000008686	PRPF6	96	99.469	Pan_paniscus
ENSOCUG00000014151	PRPF6	100	96.781	ENSPPRG00000008497	PRPF6	99	96.781	Panthera_pardus
ENSOCUG00000014151	PRPF6	98	97.383	ENSPTIG00000011184	PRPF6	97	97.383	Panthera_tigris_altaica
ENSOCUG00000014151	PRPF6	100	96.137	ENSPTRG00000013765	PRPF6	96	99.469	Pan_troglodytes
ENSOCUG00000014151	PRPF6	100	95.494	ENSPANG00000024135	PRPF6	99	95.494	Papio_anubis
ENSOCUG00000014151	PRPF6	100	92.275	ENSPKIG00000005627	prpf6	98	92.704	Paramormyrops_kingsleyae
ENSOCUG00000014151	PRPF6	95	97.052	ENSPSIG00000007717	PRPF6	100	97.052	Pelodiscus_sinensis
ENSOCUG00000014151	PRPF6	100	87.996	ENSPMGG00000008925	prpf6	95	88.210	Periophthalmus_magnuspinnatus
ENSOCUG00000014151	PRPF6	100	97.103	ENSPEMG00000016036	Prpf6	99	97.103	Peromyscus_maniculatus_bairdii
ENSOCUG00000014151	PRPF6	100	87.366	ENSPMAG00000006144	prpf6	98	87.366	Petromyzon_marinus
ENSOCUG00000014151	PRPF6	100	96.781	ENSPCIG00000017909	PRPF6	99	96.781	Phascolarctos_cinereus
ENSOCUG00000014151	PRPF6	100	90.987	ENSPFOG00000006431	prpf6	95	91.416	Poecilia_formosa
ENSOCUG00000014151	PRPF6	100	90.880	ENSPLAG00000005974	prpf6	95	91.309	Poecilia_latipinna
ENSOCUG00000014151	PRPF6	100	91.094	ENSPMEG00000009977	prpf6	95	91.524	Poecilia_mexicana
ENSOCUG00000014151	PRPF6	100	90.987	ENSPREG00000017993	prpf6	91	91.416	Poecilia_reticulata
ENSOCUG00000014151	PRPF6	100	95.601	ENSPPYG00000011256	PRPF6	99	95.601	Pongo_abelii
ENSOCUG00000014151	PRPF6	96	99.183	ENSPCAG00000006536	PRPF6	88	99.183	Procavia_capensis
ENSOCUG00000014151	PRPF6	100	96.781	ENSPCOG00000016881	PRPF6	99	96.781	Propithecus_coquereli
ENSOCUG00000014151	PRPF6	100	90.987	ENSPVAG00000014316	PRPF6	99	90.987	Pteropus_vampyrus
ENSOCUG00000014151	PRPF6	100	73.955	ENSPNYG00000001939	prpf6	95	79.292	Pundamilia_nyererei
ENSOCUG00000014151	PRPF6	100	91.416	ENSPNAG00000015606	prpf6	95	91.845	Pygocentrus_nattereri
ENSOCUG00000014151	PRPF6	100	97.103	ENSRNOG00000051498	Prpf6	99	97.103	Rattus_norvegicus
ENSOCUG00000014151	PRPF6	100	96.030	ENSRBIG00000043613	PRPF6	98	97.751	Rhinopithecus_bieti
ENSOCUG00000014151	PRPF6	100	92.842	ENSRROG00000040969	PRPF6	98	97.751	Rhinopithecus_roxellana
ENSOCUG00000014151	PRPF6	92	94.867	ENSSBOG00000020632	PRPF6	91	94.867	Saimiri_boliviensis_boliviensis
ENSOCUG00000014151	PRPF6	100	96.781	ENSSHAG00000016810	PRPF6	99	96.781	Sarcophilus_harrisii
ENSOCUG00000014151	PRPF6	99	92.803	ENSSFOG00015020859	prpf6	100	93.233	Scleropages_formosus
ENSOCUG00000014151	PRPF6	100	89.807	ENSSMAG00000008112	prpf6	95	89.807	Scophthalmus_maximus
ENSOCUG00000014151	PRPF6	100	90.451	ENSSDUG00000016142	prpf6	95	90.880	Seriola_dumerili
ENSOCUG00000014151	PRPF6	100	90.451	ENSSLDG00000025283	prpf6	99	87.339	Seriola_lalandi_dorsalis
ENSOCUG00000014151	PRPF6	95	95.692	ENSSPUG00000018260	PRPF6	100	95.692	Sphenodon_punctatus
ENSOCUG00000014151	PRPF6	100	90.451	ENSSPAG00000015850	prpf6	95	90.880	Stegastes_partitus
ENSOCUG00000014151	PRPF6	100	96.459	ENSSSCG00000029119	PRPF6	100	96.939	Sus_scrofa
ENSOCUG00000014151	PRPF6	100	96.137	ENSTGUG00000007221	PRPF6	99	96.137	Taeniopygia_guttata
ENSOCUG00000014151	PRPF6	100	89.700	ENSTRUG00000002920	prpf6	95	90.129	Takifugu_rubripes
ENSOCUG00000014151	PRPF6	100	83.351	ENSTNIG00000017873	prpf6	99	83.778	Tetraodon_nigroviridis
ENSOCUG00000014151	PRPF6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSOCUG00000014151	PRPF6	100	96.352	ENSTTRG00000013068	PRPF6	99	96.352	Tursiops_truncatus
ENSOCUG00000014151	PRPF6	99	95.761	ENSUMAG00000021631	PRPF6	98	95.761	Ursus_maritimus
ENSOCUG00000014151	PRPF6	100	96.888	ENSVVUG00000014948	PRPF6	99	96.888	Vulpes_vulpes
ENSOCUG00000014151	PRPF6	100	93.991	ENSXETG00000012054	prpf6	96	94.421	Xenopus_tropicalis
ENSOCUG00000014151	PRPF6	100	91.094	ENSXCOG00000008082	prpf6	95	91.524	Xiphophorus_couchianus
ENSOCUG00000014151	PRPF6	100	91.094	ENSXMAG00000015581	prpf6	95	91.524	Xiphophorus_maculatus