EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000014247 (Gene tree)
Gene ID: 100346550
Gene Symbol: RTCA
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 24035 bases
Position: chr13:63877134-63901168
Accession: 100346550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000012248	RTC	PF01137.21	1.9e-87	1	1
ENSOCUP00000012248	RTC_insert	PF05189.13	2.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000014249	RTCA-201	2932	XM_002715834	ENSOCUP00000012248	366 (aa)	XP_002715880	G1T706

Gene Model

Click here to download ENSOCUG00000014247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000014247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000014247	RTCA	100	95.628	ENSG00000137996	RTCA	100	95.628	Homo_sapiens
ENSOCUG00000014247	RTCA	100	71.038	ENSAPOG00000001345	rtca	99	71.038	Acanthochromis_polyacanthus
ENSOCUG00000014247	RTCA	73	95.539	ENSAMEG00000008855	RTCA	100	95.539	Ailuropoda_melanoleuca
ENSOCUG00000014247	RTCA	100	71.390	ENSACIG00000019643	rtca	100	71.390	Amphilophus_citrinellus
ENSOCUG00000014247	RTCA	100	71.038	ENSAOCG00000014979	rtca	99	71.038	Amphiprion_ocellaris
ENSOCUG00000014247	RTCA	100	71.038	ENSAPEG00000006945	rtca	99	71.038	Amphiprion_percula
ENSOCUG00000014247	RTCA	100	69.945	ENSATEG00000006315	rtca	100	69.945	Anabas_testudineus
ENSOCUG00000014247	RTCA	96	80.226	ENSAPLG00000015430	RTCA	100	80.226	Anas_platyrhynchos
ENSOCUG00000014247	RTCA	100	94.809	ENSANAG00000025446	RTCA	100	94.809	Aotus_nancymaae
ENSOCUG00000014247	RTCA	100	70.300	ENSACLG00000020770	rtca	99	70.300	Astatotilapia_calliptera
ENSOCUG00000014247	RTCA	98	73.333	ENSAMXG00000043271	rtca	98	73.333	Astyanax_mexicanus
ENSOCUG00000014247	RTCA	100	96.175	ENSBTAG00000006321	RTCA	100	96.175	Bos_taurus
ENSOCUG00000014247	RTCA	100	95.082	ENSCJAG00000003398	RTCA	100	95.082	Callithrix_jacchus
ENSOCUG00000014247	RTCA	100	96.175	ENSCAFG00000020010	RTCA	68	96.175	Canis_familiaris
ENSOCUG00000014247	RTCA	100	96.175	ENSCAFG00020011528	RTCA	57	96.175	Canis_lupus_dingo
ENSOCUG00000014247	RTCA	100	95.902	ENSCHIG00000018937	RTCA	100	95.902	Capra_hircus
ENSOCUG00000014247	RTCA	100	94.809	ENSTSYG00000011305	RTCA	100	94.809	Carlito_syrichta
ENSOCUG00000014247	RTCA	100	94.809	ENSCCAG00000021844	RTCA	100	94.809	Cebus_capucinus
ENSOCUG00000014247	RTCA	100	92.348	ENSCATG00000019364	RTCA	100	95.793	Cercocebus_atys
ENSOCUG00000014247	RTCA	87	95.899	ENSCLAG00000006125	RTCA	100	95.899	Chinchilla_lanigera
ENSOCUG00000014247	RTCA	100	95.902	ENSCSAG00000001509	RTCA	100	95.902	Chlorocebus_sabaeus
ENSOCUG00000014247	RTCA	100	94.809	ENSCHOG00000005211	RTCA	100	94.809	Choloepus_hoffmanni
ENSOCUG00000014247	RTCA	100	84.426	ENSCPBG00000026658	RTCA	100	84.426	Chrysemys_picta_bellii
ENSOCUG00000014247	RTCA	98	56.389	ENSCING00000007875	-	98	56.389	Ciona_intestinalis
ENSOCUG00000014247	RTCA	98	55.278	ENSCSAVG00000007269	-	98	55.278	Ciona_savignyi
ENSOCUG00000014247	RTCA	100	95.628	ENSCANG00000040106	RTCA	100	95.628	Colobus_angolensis_palliatus
ENSOCUG00000014247	RTCA	73	91.822	ENSCGRG00001013163	Rtca	85	91.822	Cricetulus_griseus_chok1gshd
ENSOCUG00000014247	RTCA	98	69.444	ENSCSEG00000000530	rtca	96	69.444	Cynoglossus_semilaevis
ENSOCUG00000014247	RTCA	100	59.290	ENSCVAG00000021809	rtca	100	59.290	Cyprinodon_variegatus
ENSOCUG00000014247	RTCA	100	73.224	ENSDARG00000002215	rtca	100	73.224	Danio_rerio
ENSOCUG00000014247	RTCA	100	94.809	ENSDNOG00000000456	RTCA	100	94.809	Dasypus_novemcinctus
ENSOCUG00000014247	RTCA	100	93.169	ENSDORG00000005448	Rtca	100	93.169	Dipodomys_ordii
ENSOCUG00000014247	RTCA	98	37.709	FBgn0025630	Rtca	98	37.709	Drosophila_melanogaster
ENSOCUG00000014247	RTCA	95	55.085	ENSEBUG00000008556	rtca	97	55.085	Eptatretus_burgeri
ENSOCUG00000014247	RTCA	100	95.355	ENSEASG00005015926	RTCA	100	95.355	Equus_asinus_asinus
ENSOCUG00000014247	RTCA	100	95.355	ENSECAG00000019831	RTCA	100	95.355	Equus_caballus
ENSOCUG00000014247	RTCA	91	84.393	ENSEEUG00000001165	RTCA	100	84.393	Erinaceus_europaeus
ENSOCUG00000014247	RTCA	99	72.853	ENSELUG00000003741	rtca	99	72.853	Esox_lucius
ENSOCUG00000014247	RTCA	100	96.721	ENSFCAG00000024460	RTCA	100	96.721	Felis_catus
ENSOCUG00000014247	RTCA	93	81.765	ENSFALG00000002443	RTCA	91	81.765	Ficedula_albicollis
ENSOCUG00000014247	RTCA	98	74.033	ENSFDAG00000016084	-	100	74.033	Fukomys_damarensis
ENSOCUG00000014247	RTCA	100	95.355	ENSFDAG00000012070	-	100	95.355	Fukomys_damarensis
ENSOCUG00000014247	RTCA	72	61.069	ENSFHEG00000002868	rtca	90	71.154	Fundulus_heteroclitus
ENSOCUG00000014247	RTCA	100	69.399	ENSGMOG00000013264	rtca	100	69.399	Gadus_morhua
ENSOCUG00000014247	RTCA	100	83.333	ENSGALG00000005277	RTCA	100	83.333	Gallus_gallus
ENSOCUG00000014247	RTCA	100	71.585	ENSGAFG00000011853	rtca	99	71.585	Gambusia_affinis
ENSOCUG00000014247	RTCA	100	69.399	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSOCUG00000014247	RTCA	80	84.983	ENSGAGG00000023306	RTCA	100	84.983	Gopherus_agassizii
ENSOCUG00000014247	RTCA	100	95.628	ENSGGOG00000009546	-	100	95.793	Gorilla_gorilla
ENSOCUG00000014247	RTCA	100	94.809	ENSGGOG00000044018	-	100	94.809	Gorilla_gorilla
ENSOCUG00000014247	RTCA	100	70.027	ENSHBUG00000002114	rtca	99	70.027	Haplochromis_burtoni
ENSOCUG00000014247	RTCA	100	94.809	ENSHGLG00000002617	RTCA	100	94.809	Heterocephalus_glaber_female
ENSOCUG00000014247	RTCA	100	94.809	ENSHGLG00100006056	RTCA	100	94.809	Heterocephalus_glaber_male
ENSOCUG00000014247	RTCA	100	64.208	ENSHCOG00000020628	rtca	89	64.208	Hippocampus_comes
ENSOCUG00000014247	RTCA	100	72.678	ENSIPUG00000024803	rtca	100	72.678	Ictalurus_punctatus
ENSOCUG00000014247	RTCA	100	89.071	ENSSTOG00000013528	-	100	89.071	Ictidomys_tridecemlineatus
ENSOCUG00000014247	RTCA	100	84.741	ENSSTOG00000033099	-	100	84.741	Ictidomys_tridecemlineatus
ENSOCUG00000014247	RTCA	100	67.213	ENSJJAG00000016178	Rtca	100	67.213	Jaculus_jaculus
ENSOCUG00000014247	RTCA	100	71.311	ENSKMAG00000006651	rtca	99	71.311	Kryptolebias_marmoratus
ENSOCUG00000014247	RTCA	88	69.159	ENSLBEG00000002448	-	99	69.159	Labrus_bergylta
ENSOCUG00000014247	RTCA	99	69.529	ENSLBEG00000028971	rtca	99	69.529	Labrus_bergylta
ENSOCUG00000014247	RTCA	100	78.962	ENSLACG00000013666	RTCA	100	78.962	Latimeria_chalumnae
ENSOCUG00000014247	RTCA	100	73.224	ENSLOCG00000000093	rtca	99	73.224	Lepisosteus_oculatus
ENSOCUG00000014247	RTCA	100	95.082	ENSLAFG00000001473	RTCA	100	95.082	Loxodonta_africana
ENSOCUG00000014247	RTCA	100	95.902	ENSMFAG00000034132	RTCA	100	95.902	Macaca_fascicularis
ENSOCUG00000014247	RTCA	100	95.355	ENSMMUG00000019105	RTCA	100	95.355	Macaca_mulatta
ENSOCUG00000014247	RTCA	84	96.117	ENSMNEG00000037163	RTCA	100	96.117	Macaca_nemestrina
ENSOCUG00000014247	RTCA	100	78.415	ENSMLEG00000042151	RTCA	100	78.415	Mandrillus_leucophaeus
ENSOCUG00000014247	RTCA	100	72.951	ENSMAMG00000016536	rtca	100	72.951	Mastacembelus_armatus
ENSOCUG00000014247	RTCA	100	70.300	ENSMZEG00005017945	rtca	99	70.300	Maylandia_zebra
ENSOCUG00000014247	RTCA	87	81.505	ENSMGAG00000006892	RTCA	99	81.505	Meleagris_gallopavo
ENSOCUG00000014247	RTCA	100	92.350	ENSMAUG00000008488	Rtca	100	92.350	Mesocricetus_auratus
ENSOCUG00000014247	RTCA	84	96.764	ENSMICG00000008643	RTCA	100	96.764	Microcebus_murinus
ENSOCUG00000014247	RTCA	100	93.169	ENSMOCG00000016660	Rtca	100	93.169	Microtus_ochrogaster
ENSOCUG00000014247	RTCA	84	71.845	ENSMMOG00000007750	rtca	100	71.845	Mola_mola
ENSOCUG00000014247	RTCA	100	91.530	ENSMODG00000003557	RTCA	100	91.530	Monodelphis_domestica
ENSOCUG00000014247	RTCA	100	72.678	ENSMALG00000020844	rtca	100	72.678	Monopterus_albus
ENSOCUG00000014247	RTCA	100	92.077	MGP_CAROLIEiJ_G0025565	Rtca	100	92.254	Mus_caroli
ENSOCUG00000014247	RTCA	100	91.530	ENSMUSG00000000339	Rtca	100	92.254	Mus_musculus
ENSOCUG00000014247	RTCA	100	91.803	MGP_PahariEiJ_G0027011	Rtca	92	100.000	Mus_pahari
ENSOCUG00000014247	RTCA	100	91.803	MGP_SPRETEiJ_G0026515	Rtca	92	100.000	Mus_spretus
ENSOCUG00000014247	RTCA	100	96.448	ENSMPUG00000012119	RTCA	100	96.448	Mustela_putorius_furo
ENSOCUG00000014247	RTCA	100	88.556	ENSMLUG00000009922	RTCA	100	88.556	Myotis_lucifugus
ENSOCUG00000014247	RTCA	100	92.077	ENSNGAG00000011540	Rtca	99	92.077	Nannospalax_galili
ENSOCUG00000014247	RTCA	100	70.219	ENSNBRG00000003062	rtca	99	70.219	Neolamprologus_brichardi
ENSOCUG00000014247	RTCA	100	95.628	ENSNLEG00000031426	RTCA	100	95.628	Nomascus_leucogenys
ENSOCUG00000014247	RTCA	76	81.818	ENSMEUG00000010030	-	77	81.818	Notamacropus_eugenii
ENSOCUG00000014247	RTCA	73	90.706	ENSOPRG00000012092	RTCA	71	90.706	Ochotona_princeps
ENSOCUG00000014247	RTCA	95	95.402	ENSODEG00000006990	RTCA	96	95.442	Octodon_degus
ENSOCUG00000014247	RTCA	100	70.300	ENSONIG00000007753	rtca	99	70.300	Oreochromis_niloticus
ENSOCUG00000014247	RTCA	87	88.959	ENSOANG00000012055	RTCA	98	88.959	Ornithorhynchus_anatinus
ENSOCUG00000014247	RTCA	100	70.492	ENSORLG00000013605	rtca	100	70.492	Oryzias_latipes
ENSOCUG00000014247	RTCA	100	70.492	ENSORLG00020001904	rtca	100	70.492	Oryzias_latipes_hni
ENSOCUG00000014247	RTCA	100	70.765	ENSORLG00015021064	rtca	100	70.765	Oryzias_latipes_hsok
ENSOCUG00000014247	RTCA	100	71.311	ENSOMEG00000000756	rtca	100	71.311	Oryzias_melastigma
ENSOCUG00000014247	RTCA	100	86.066	ENSOGAG00000005627	RTCA	100	86.066	Otolemur_garnettii
ENSOCUG00000014247	RTCA	87	95.283	ENSOARG00000018122	RTCA	100	95.283	Ovis_aries
ENSOCUG00000014247	RTCA	100	91.821	ENSPPAG00000035119	RTCA	100	95.469	Pan_paniscus
ENSOCUG00000014247	RTCA	100	96.448	ENSPPRG00000000350	RTCA	100	96.448	Panthera_pardus
ENSOCUG00000014247	RTCA	100	96.448	ENSPTIG00000012816	RTCA	100	96.448	Panthera_tigris_altaica
ENSOCUG00000014247	RTCA	100	91.821	ENSPTRG00000001004	RTCA	100	95.469	Pan_troglodytes
ENSOCUG00000014247	RTCA	100	95.902	ENSPANG00000000346	RTCA	100	95.902	Papio_anubis
ENSOCUG00000014247	RTCA	100	73.770	ENSPKIG00000001653	rtca	100	73.770	Paramormyrops_kingsleyae
ENSOCUG00000014247	RTCA	100	84.973	ENSPSIG00000011408	RTCA	100	84.973	Pelodiscus_sinensis
ENSOCUG00000014247	RTCA	100	92.350	ENSPEMG00000018582	Rtca	100	92.350	Peromyscus_maniculatus_bairdii
ENSOCUG00000014247	RTCA	99	59.016	ENSPMAG00000009110	rtca	99	59.016	Petromyzon_marinus
ENSOCUG00000014247	RTCA	100	91.530	ENSPCIG00000007684	RTCA	100	91.530	Phascolarctos_cinereus
ENSOCUG00000014247	RTCA	100	71.935	ENSPFOG00000004824	rtca	100	71.935	Poecilia_formosa
ENSOCUG00000014247	RTCA	100	72.131	ENSPLAG00000011753	rtca	99	72.131	Poecilia_latipinna
ENSOCUG00000014247	RTCA	100	72.131	ENSPMEG00000020469	rtca	99	72.131	Poecilia_mexicana
ENSOCUG00000014247	RTCA	100	72.951	ENSPREG00000001365	rtca	99	72.951	Poecilia_reticulata
ENSOCUG00000014247	RTCA	100	95.628	ENSPPYG00000001115	RTCA	100	95.628	Pongo_abelii
ENSOCUG00000014247	RTCA	100	92.077	ENSPCAG00000005076	RTCA	100	92.077	Procavia_capensis
ENSOCUG00000014247	RTCA	100	96.995	ENSPCOG00000005603	RTCA	100	96.995	Propithecus_coquereli
ENSOCUG00000014247	RTCA	100	91.821	ENSPVAG00000009478	RTCA	100	91.821	Pteropus_vampyrus
ENSOCUG00000014247	RTCA	100	70.300	ENSPNYG00000004722	rtca	99	70.300	Pundamilia_nyererei
ENSOCUG00000014247	RTCA	100	72.404	ENSPNAG00000022270	rtca	100	72.404	Pygocentrus_nattereri
ENSOCUG00000014247	RTCA	100	92.077	ENSRNOG00000014575	Rtca	100	92.077	Rattus_norvegicus
ENSOCUG00000014247	RTCA	100	91.821	ENSRBIG00000041180	RTCA	100	95.146	Rhinopithecus_bieti
ENSOCUG00000014247	RTCA	100	95.082	ENSRROG00000024929	RTCA	100	95.082	Rhinopithecus_roxellana
ENSOCUG00000014247	RTCA	100	94.262	ENSSBOG00000028626	RTCA	100	94.262	Saimiri_boliviensis_boliviensis
ENSOCUG00000014247	RTCA	100	92.077	ENSSHAG00000001758	RTCA	100	92.077	Sarcophilus_harrisii
ENSOCUG00000014247	RTCA	98	69.167	ENSSMAG00000014680	rtca	97	69.167	Scophthalmus_maximus
ENSOCUG00000014247	RTCA	98	71.389	ENSSDUG00000015585	rtca	97	71.389	Seriola_dumerili
ENSOCUG00000014247	RTCA	96	71.795	ENSSLDG00000018985	rtca	95	71.795	Seriola_lalandi_dorsalis
ENSOCUG00000014247	RTCA	87	87.697	ENSSARG00000013993	RTCA	100	87.697	Sorex_araneus
ENSOCUG00000014247	RTCA	100	70.492	ENSSPAG00000011938	rtca	99	70.492	Stegastes_partitus
ENSOCUG00000014247	RTCA	100	95.902	ENSSSCG00000006865	RTCA	100	95.902	Sus_scrofa
ENSOCUG00000014247	RTCA	100	83.333	ENSTGUG00000005154	RTCA	100	83.333	Taeniopygia_guttata
ENSOCUG00000014247	RTCA	100	71.038	ENSTRUG00000008799	rtca	100	71.038	Takifugu_rubripes
ENSOCUG00000014247	RTCA	100	72.404	ENSTNIG00000004725	rtca	100	72.404	Tetraodon_nigroviridis
ENSOCUG00000014247	RTCA	59	82.727	ENSTBEG00000000943	RTCA	82	66.387	Tupaia_belangeri
ENSOCUG00000014247	RTCA	100	91.293	ENSTTRG00000015327	RTCA	100	91.293	Tursiops_truncatus
ENSOCUG00000014247	RTCA	94	93.586	ENSUAMG00000017265	RTCA	96	93.586	Ursus_americanus
ENSOCUG00000014247	RTCA	100	95.355	ENSUMAG00000007881	RTCA	100	95.355	Ursus_maritimus
ENSOCUG00000014247	RTCA	87	86.435	ENSVPAG00000001039	RTCA	84	86.435	Vicugna_pacos
ENSOCUG00000014247	RTCA	100	95.902	ENSVVUG00000022041	RTCA	68	95.902	Vulpes_vulpes
ENSOCUG00000014247	RTCA	99	65.489	ENSXETG00000031661	RTCA	99	65.489	Xenopus_tropicalis
ENSOCUG00000014247	RTCA	100	62.842	ENSXCOG00000008002	rtca	100	62.842	Xiphophorus_couchianus
ENSOCUG00000014247	RTCA	100	71.858	ENSXMAG00000005482	rtca	99	71.858	Xiphophorus_maculatus