EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000014469 (Gene tree)
Gene ID: 100348766
Gene Symbol: HNRNPU
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 9409 bases
Position: chr16:22634851-22644259
Accession: 100348766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000012445	SAP	PF02037.27	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000014473	HNRNPU-201	3049	XM_002717635	ENSOCUP00000012445	871 (aa)	XP_002717681	G1T7H0

Gene Model

Click here to download ENSOCUG00000014469's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000014469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000014469	HNRNPU	78	46.912	ENSOCUG00000016666	HNRNPUL1	64	60.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000014469	HNRNPU	93	98.639	ENSG00000153187	HNRNPU	99	99.666	Homo_sapiens
ENSOCUG00000014469	HNRNPU	68	77.083	ENSAPOG00000017400	hnrnpub	85	77.083	Acanthochromis_polyacanthus
ENSOCUG00000014469	HNRNPU	92	94.900	ENSAMEG00000009145	HNRNPU	98	94.561	Ailuropoda_melanoleuca
ENSOCUG00000014469	HNRNPU	80	57.604	ENSACIG00000012138	hnrnpub	86	80.952	Amphilophus_citrinellus
ENSOCUG00000014469	HNRNPU	72	75.000	ENSAOCG00000015843	hnrnpub	87	61.538	Amphiprion_ocellaris
ENSOCUG00000014469	HNRNPU	72	75.000	ENSAPEG00000014679	hnrnpub	87	61.538	Amphiprion_percula
ENSOCUG00000014469	HNRNPU	70	72.549	ENSATEG00000016178	hnrnpub	89	57.822	Anabas_testudineus
ENSOCUG00000014469	HNRNPU	74	84.370	ENSACAG00000004511	HNRNPU	70	89.744	Anolis_carolinensis
ENSOCUG00000014469	HNRNPU	94	95.466	ENSANAG00000033895	-	97	99.029	Aotus_nancymaae
ENSOCUG00000014469	HNRNPU	69	83.333	ENSACLG00000008165	hnrnpub	83	83.333	Astatotilapia_calliptera
ENSOCUG00000014469	HNRNPU	93	99.134	ENSBTAG00000007606	HNRNPU	98	99.134	Bos_taurus
ENSOCUG00000014469	HNRNPU	93	98.267	ENSCJAG00000016914	HNRNPU	98	98.267	Callithrix_jacchus
ENSOCUG00000014469	HNRNPU	94	95.833	ENSCAFG00020000918	HNRNPU	99	95.833	Canis_lupus_dingo
ENSOCUG00000014469	HNRNPU	94	96.078	ENSCHIG00000004900	HNRNPU	99	96.078	Capra_hircus
ENSOCUG00000014469	HNRNPU	93	98.020	ENSCPOG00000011887	HNRNPU	98	98.020	Cavia_porcellus
ENSOCUG00000014469	HNRNPU	93	98.515	ENSCCAG00000037859	-	98	98.515	Cebus_capucinus
ENSOCUG00000014469	HNRNPU	93	98.267	ENSCATG00000035273	HNRNPU	98	98.267	Cercocebus_atys
ENSOCUG00000014469	HNRNPU	93	98.267	ENSCLAG00000007100	HNRNPU	98	98.267	Chinchilla_lanigera
ENSOCUG00000014469	HNRNPU	93	95.916	ENSCSAG00000009219	HNRNPU	98	95.916	Chlorocebus_sabaeus
ENSOCUG00000014469	HNRNPU	73	100.000	ENSCHOG00000001387	HNRNPU	77	100.000	Choloepus_hoffmanni
ENSOCUG00000014469	HNRNPU	92	81.091	ENSCPBG00000009415	HNRNPU	98	81.320	Chrysemys_picta_bellii
ENSOCUG00000014469	HNRNPU	94	92.874	ENSCANG00000022780	HNRNPU	98	97.477	Colobus_angolensis_palliatus
ENSOCUG00000014469	HNRNPU	93	93.936	ENSCGRG00001020525	Hnrnpu	98	94.059	Cricetulus_griseus_chok1gshd
ENSOCUG00000014469	HNRNPU	73	67.213	ENSCSEG00000010804	hnrnpub	89	64.062	Cynoglossus_semilaevis
ENSOCUG00000014469	HNRNPU	73	71.429	ENSCVAG00000004280	hnrnpub	83	71.429	Cyprinodon_variegatus
ENSOCUG00000014469	HNRNPU	72	85.714	ENSDARG00000004735	hnrnpub	89	59.459	Danio_rerio
ENSOCUG00000014469	HNRNPU	77	60.100	ENSDARG00000015206	hnrnpua	88	62.319	Danio_rerio
ENSOCUG00000014469	HNRNPU	72	100.000	ENSDNOG00000000215	HNRNPU	86	100.000	Dasypus_novemcinctus
ENSOCUG00000014469	HNRNPU	92	89.664	ENSDORG00000015491	Hnrnpu	98	90.347	Dipodomys_ordii
ENSOCUG00000014469	HNRNPU	92	92.154	ENSETEG00000014565	HNRNPU	98	91.584	Echinops_telfairi
ENSOCUG00000014469	HNRNPU	93	96.411	ENSEASG00005003017	HNRNPU	98	96.411	Equus_asinus_asinus
ENSOCUG00000014469	HNRNPU	93	96.163	ENSECAG00000007955	HNRNPU	98	96.163	Equus_caballus
ENSOCUG00000014469	HNRNPU	63	64.085	ENSELUG00000010733	hnrnpub	68	62.814	Esox_lucius
ENSOCUG00000014469	HNRNPU	62	71.845	ENSELUG00000011966	hnrnpua	86	65.079	Esox_lucius
ENSOCUG00000014469	HNRNPU	94	95.711	ENSFCAG00000002156	HNRNPU	97	98.835	Felis_catus
ENSOCUG00000014469	HNRNPU	85	96.506	ENSFDAG00000006026	HNRNPU	97	96.506	Fukomys_damarensis
ENSOCUG00000014469	HNRNPU	74	69.643	ENSFHEG00000022639	hnrnpub	70	66.667	Fundulus_heteroclitus
ENSOCUG00000014469	HNRNPU	67	58.374	ENSGMOG00000001755	hnrnpub	75	61.279	Gadus_morhua
ENSOCUG00000014469	HNRNPU	92	79.976	ENSGALG00000010671	HNRNPU	99	79.157	Gallus_gallus
ENSOCUG00000014469	HNRNPU	59	78.261	ENSGAFG00000009369	hnrnpub	76	78.261	Gambusia_affinis
ENSOCUG00000014469	HNRNPU	68	60.616	ENSGACG00000004679	hnrnpub	71	61.864	Gasterosteus_aculeatus
ENSOCUG00000014469	HNRNPU	93	98.144	ENSGGOG00000004061	HNRNPU	97	99.223	Gorilla_gorilla
ENSOCUG00000014469	HNRNPU	69	83.333	ENSHBUG00000012290	hnrnpub	83	83.333	Haplochromis_burtoni
ENSOCUG00000014469	HNRNPU	93	96.305	ENSHGLG00000010594	-	98	96.305	Heterocephalus_glaber_female
ENSOCUG00000014469	HNRNPU	75	98.637	ENSHGLG00100015093	HNRNPU	97	98.637	Heterocephalus_glaber_male
ENSOCUG00000014469	HNRNPU	69	83.333	ENSHCOG00000020091	hnrnpub	82	79.545	Hippocampus_comes
ENSOCUG00000014469	HNRNPU	72	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSOCUG00000014469	HNRNPU	93	96.420	ENSJJAG00000011371	Hnrnpu	98	96.420	Jaculus_jaculus
ENSOCUG00000014469	HNRNPU	82	55.038	ENSKMAG00000004532	hnrnpub	80	61.636	Kryptolebias_marmoratus
ENSOCUG00000014469	HNRNPU	76	58.667	ENSLBEG00000022520	hnrnpub	85	61.194	Labrus_bergylta
ENSOCUG00000014469	HNRNPU	92	60.837	ENSLACG00000017463	HNRNPU	97	60.736	Latimeria_chalumnae
ENSOCUG00000014469	HNRNPU	73	80.435	ENSLOCG00000016652	hnrnpua	83	67.581	Lepisosteus_oculatus
ENSOCUG00000014469	HNRNPU	93	97.772	ENSLAFG00000021377	HNRNPU	98	97.772	Loxodonta_africana
ENSOCUG00000014469	HNRNPU	93	98.267	ENSMFAG00000037308	HNRNPU	98	98.267	Macaca_fascicularis
ENSOCUG00000014469	HNRNPU	93	95.916	ENSMMUG00000021098	HNRNPU	98	95.916	Macaca_mulatta
ENSOCUG00000014469	HNRNPU	93	98.267	ENSMNEG00000043645	HNRNPU	98	98.267	Macaca_nemestrina
ENSOCUG00000014469	HNRNPU	74	73.077	ENSMAMG00000007196	hnrnpub	79	73.077	Mastacembelus_armatus
ENSOCUG00000014469	HNRNPU	69	83.333	ENSMZEG00005003185	hnrnpub	83	83.333	Maylandia_zebra
ENSOCUG00000014469	HNRNPU	92	94.286	ENSMAUG00000008842	Hnrnpu	98	94.307	Mesocricetus_auratus
ENSOCUG00000014469	HNRNPU	93	98.639	ENSMICG00000004616	HNRNPU	97	99.806	Microcebus_murinus
ENSOCUG00000014469	HNRNPU	93	93.812	ENSMOCG00000015623	Hnrnpu	98	94.059	Microtus_ochrogaster
ENSOCUG00000014469	HNRNPU	92	90.580	ENSMODG00000006515	HNRNPU	98	92.557	Monodelphis_domestica
ENSOCUG00000014469	HNRNPU	72	70.588	ENSMALG00000018243	hnrnpub	84	61.824	Monopterus_albus
ENSOCUG00000014469	HNRNPU	93	94.190	MGP_CAROLIEiJ_G0014962	Hnrnpu	98	94.190	Mus_caroli
ENSOCUG00000014469	HNRNPU	94	93.635	ENSMUSG00000039630	Hnrnpu	99	93.635	Mus_musculus
ENSOCUG00000014469	HNRNPU	93	93.457	MGP_PahariEiJ_G0028193	Hnrnpu	98	93.457	Mus_pahari
ENSOCUG00000014469	HNRNPU	93	94.314	MGP_SPRETEiJ_G0015761	Hnrnpu	98	94.314	Mus_spretus
ENSOCUG00000014469	HNRNPU	66	96.701	ENSMLUG00000000475	HNRNPU	72	97.059	Myotis_lucifugus
ENSOCUG00000014469	HNRNPU	93	94.678	ENSNGAG00000019075	Hnrnpu	98	94.678	Nannospalax_galili
ENSOCUG00000014469	HNRNPU	69	83.333	ENSNBRG00000017855	hnrnpub	83	83.333	Neolamprologus_brichardi
ENSOCUG00000014469	HNRNPU	92	88.113	ENSMEUG00000000541	HNRNPU	99	90.134	Notamacropus_eugenii
ENSOCUG00000014469	HNRNPU	64	97.531	ENSODEG00000014458	-	97	97.674	Octodon_degus
ENSOCUG00000014469	HNRNPU	72	83.333	ENSONIG00000001260	hnrnpub	87	83.333	Oreochromis_niloticus
ENSOCUG00000014469	HNRNPU	70	83.333	ENSORLG00000016114	hnrnpub	84	83.333	Oryzias_latipes
ENSOCUG00000014469	HNRNPU	71	78.261	ENSORLG00020005363	hnrnpub	78	83.333	Oryzias_latipes_hni
ENSOCUG00000014469	HNRNPU	69	78.261	ENSORLG00015001190	hnrnpub	78	83.333	Oryzias_latipes_hsok
ENSOCUG00000014469	HNRNPU	69	78.261	ENSOMEG00000014951	hnrnpub	86	83.333	Oryzias_melastigma
ENSOCUG00000014469	HNRNPU	93	96.163	ENSOGAG00000014024	HNRNPU	98	96.163	Otolemur_garnettii
ENSOCUG00000014469	HNRNPU	74	100.000	ENSOARG00000004985	HNRNPU	88	98.964	Ovis_aries
ENSOCUG00000014469	HNRNPU	93	98.639	ENSPPAG00000038652	HNRNPU	98	98.639	Pan_paniscus
ENSOCUG00000014469	HNRNPU	93	98.639	ENSPPRG00000002662	HNRNPU	98	98.639	Panthera_pardus
ENSOCUG00000014469	HNRNPU	93	98.639	ENSPTRG00000002182	HNRNPU	98	98.639	Pan_troglodytes
ENSOCUG00000014469	HNRNPU	94	95.221	ENSPANG00000011643	HNRNPU	97	99.029	Papio_anubis
ENSOCUG00000014469	HNRNPU	78	66.019	ENSPKIG00000022332	hnrnpub	83	71.698	Paramormyrops_kingsleyae
ENSOCUG00000014469	HNRNPU	72	80.851	ENSPKIG00000006885	hnrnpua	76	66.503	Paramormyrops_kingsleyae
ENSOCUG00000014469	HNRNPU	93	94.884	ENSPCIG00000008657	HNRNPU	98	94.884	Phascolarctos_cinereus
ENSOCUG00000014469	HNRNPU	61	65.245	ENSPFOG00000002908	hnrnpub	81	60.811	Poecilia_formosa
ENSOCUG00000014469	HNRNPU	75	64.062	ENSPLAG00000004160	hnrnpub	81	60.811	Poecilia_latipinna
ENSOCUG00000014469	HNRNPU	93	98.515	ENSPCOG00000018655	-	97	99.612	Propithecus_coquereli
ENSOCUG00000014469	HNRNPU	93	91.224	ENSPCOG00000003883	-	98	91.584	Propithecus_coquereli
ENSOCUG00000014469	HNRNPU	93	98.639	ENSPVAG00000002581	HNRNPU	98	98.639	Pteropus_vampyrus
ENSOCUG00000014469	HNRNPU	69	83.333	ENSPNYG00000021642	hnrnpub	83	83.333	Pundamilia_nyererei
ENSOCUG00000014469	HNRNPU	67	64.465	ENSPNAG00000001055	hnrnpub	77	64.090	Pygocentrus_nattereri
ENSOCUG00000014469	HNRNPU	94	93.260	ENSRNOG00000033790	Hnrnpu	98	93.936	Rattus_norvegicus
ENSOCUG00000014469	HNRNPU	93	94.554	ENSRBIG00000031519	HNRNPU	98	94.554	Rhinopithecus_bieti
ENSOCUG00000014469	HNRNPU	93	95.916	ENSRROG00000041642	HNRNPU	98	95.916	Rhinopithecus_roxellana
ENSOCUG00000014469	HNRNPU	78	66.351	ENSSFOG00015001124	hnrnpub	85	66.774	Scleropages_formosus
ENSOCUG00000014469	HNRNPU	63	69.821	ENSSFOG00015019004	hnrnpu	76	67.267	Scleropages_formosus
ENSOCUG00000014469	HNRNPU	70	70.588	ENSSMAG00000003607	hnrnpub	82	70.588	Scophthalmus_maximus
ENSOCUG00000014469	HNRNPU	70	70.588	ENSSDUG00000005912	hnrnpub	84	70.588	Seriola_dumerili
ENSOCUG00000014469	HNRNPU	70	70.588	ENSSLDG00000004899	hnrnpub	83	70.588	Seriola_lalandi_dorsalis
ENSOCUG00000014469	HNRNPU	92	79.853	ENSSPUG00000011393	HNRNPU	98	79.465	Sphenodon_punctatus
ENSOCUG00000014469	HNRNPU	69	78.261	ENSSPAG00000011853	hnrnpub	85	78.261	Stegastes_partitus
ENSOCUG00000014469	HNRNPU	93	98.886	ENSSSCG00000010877	HNRNPU	98	98.886	Sus_scrofa
ENSOCUG00000014469	HNRNPU	76	61.263	ENSTRUG00000007759	hnrnpub	78	64.706	Takifugu_rubripes
ENSOCUG00000014469	HNRNPU	78	56.037	ENSTNIG00000009725	hnrnpub	88	68.085	Tetraodon_nigroviridis
ENSOCUG00000014469	HNRNPU	65	100.000	ENSTTRG00000005281	HNRNPU	68	100.000	Tursiops_truncatus
ENSOCUG00000014469	HNRNPU	93	98.886	ENSUAMG00000021120	HNRNPU	98	98.886	Ursus_americanus
ENSOCUG00000014469	HNRNPU	77	98.000	ENSUMAG00000012322	HNRNPU	96	94.595	Ursus_maritimus
ENSOCUG00000014469	HNRNPU	71	99.099	ENSVPAG00000010520	HNRNPU	89	99.099	Vicugna_pacos
ENSOCUG00000014469	HNRNPU	94	95.833	ENSVVUG00000026524	HNRNPU	99	95.833	Vulpes_vulpes
ENSOCUG00000014469	HNRNPU	92	65.422	ENSXETG00000011386	hnrnpu	97	66.747	Xenopus_tropicalis
ENSOCUG00000014469	HNRNPU	59	78.261	ENSXMAG00000010356	hnrnpub	81	78.261	Xiphophorus_maculatus