EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000014529 (Gene tree)
Gene ID: 100346107
Gene Symbol: PARP4
Alias: -
Full Name: poly(ADP-ribose) polymerase family member 4
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 91751 bases
Position: chr8:44952602-45044352
Accession: 100346107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000012495	PARP	PF00644.20	4.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000014532	PARP4-201	6201	XM_008259954	ENSOCUP00000012495	1801 (aa)	XP_008258176	G1T7L3

Gene Model

Click here to download ENSOCUG00000014529's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03410	Base excision repair	KEGG
ocu04210	Apoptosis	KEGG
ocu04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000014529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000014529	PARP4	99	66.318	ENSG00000102699	PARP4	88	75.742	Homo_sapiens
ENSOCUG00000014529	PARP4	68	44.505	ENSAPOG00000020678	parp4	95	44.567	Acanthochromis_polyacanthus
ENSOCUG00000014529	PARP4	81	76.129	ENSAMEG00000017377	PARP4	100	78.748	Ailuropoda_melanoleuca
ENSOCUG00000014529	PARP4	74	45.665	ENSACIG00000021890	parp4	100	45.665	Amphilophus_citrinellus
ENSOCUG00000014529	PARP4	75	45.169	ENSAPEG00000014531	parp4	65	45.169	Amphiprion_percula
ENSOCUG00000014529	PARP4	67	46.921	ENSATEG00000023758	parp4	81	46.845	Anabas_testudineus
ENSOCUG00000014529	PARP4	67	58.689	ENSAPLG00000005053	PARP4	99	61.989	Anas_platyrhynchos
ENSOCUG00000014529	PARP4	76	53.209	ENSACAG00000001725	PARP4	78	53.209	Anolis_carolinensis
ENSOCUG00000014529	PARP4	75	45.476	ENSACLG00000009783	parp4	72	45.476	Astatotilapia_calliptera
ENSOCUG00000014529	PARP4	76	46.667	ENSAMXG00000016657	parp4	77	46.667	Astyanax_mexicanus
ENSOCUG00000014529	PARP4	92	67.103	ENSBTAG00000025400	PARP4	87	71.580	Bos_taurus
ENSOCUG00000014529	PARP4	90	72.393	ENSCJAG00000004452	PARP4	87	76.130	Callithrix_jacchus
ENSOCUG00000014529	PARP4	81	75.058	ENSCAFG00000007375	PARP4	96	75.116	Canis_familiaris
ENSOCUG00000014529	PARP4	87	74.343	ENSCAFG00020002104	PARP4	99	74.733	Canis_lupus_dingo
ENSOCUG00000014529	PARP4	78	75.831	ENSCHIG00000016066	PARP4	85	72.971	Capra_hircus
ENSOCUG00000014529	PARP4	89	78.805	ENSTSYG00000014701	PARP4	99	78.805	Carlito_syrichta
ENSOCUG00000014529	PARP4	81	72.582	ENSCPOG00000014672	PARP4	86	72.582	Cavia_porcellus
ENSOCUG00000014529	PARP4	99	63.761	ENSCATG00000035770	PARP4	99	63.923	Cercocebus_atys
ENSOCUG00000014529	PARP4	51	81.364	ENSCHOG00000006882	-	75	81.364	Choloepus_hoffmanni
ENSOCUG00000014529	PARP4	75	62.199	ENSCPBG00000020893	PARP4	79	61.637	Chrysemys_picta_bellii
ENSOCUG00000014529	PARP4	99	63.716	ENSCANG00000014573	PARP4	86	73.779	Colobus_angolensis_palliatus
ENSOCUG00000014529	PARP4	78	77.240	ENSCGRG00001021886	Parp4	83	76.082	Cricetulus_griseus_chok1gshd
ENSOCUG00000014529	PARP4	78	77.240	ENSCGRG00000011944	Parp4	82	76.082	Cricetulus_griseus_crigri
ENSOCUG00000014529	PARP4	82	44.329	ENSCSEG00000004631	parp4	92	44.122	Cynoglossus_semilaevis
ENSOCUG00000014529	PARP4	69	48.707	ENSCVAG00000010227	parp4	99	48.914	Cyprinodon_variegatus
ENSOCUG00000014529	PARP4	67	46.613	ENSDARG00000069934	parp4	68	46.688	Danio_rerio
ENSOCUG00000014529	PARP4	89	75.682	ENSDNOG00000037733	PARP4	78	75.682	Dasypus_novemcinctus
ENSOCUG00000014529	PARP4	76	76.062	ENSDORG00000029090	Parp4	98	76.062	Dipodomys_ordii
ENSOCUG00000014529	PARP4	99	65.840	ENSEASG00005000229	PARP4	97	77.041	Equus_asinus_asinus
ENSOCUG00000014529	PARP4	99	66.538	ENSECAG00000009458	PARP4	87	76.771	Equus_caballus
ENSOCUG00000014529	PARP4	75	46.592	ENSELUG00000005711	parp4	76	46.677	Esox_lucius
ENSOCUG00000014529	PARP4	81	77.726	ENSFCAG00000031561	PARP4	86	77.726	Felis_catus
ENSOCUG00000014529	PARP4	83	74.529	ENSFDAG00000010439	PARP4	84	75.929	Fukomys_damarensis
ENSOCUG00000014529	PARP4	67	46.596	ENSFHEG00000021894	parp4	95	46.677	Fundulus_heteroclitus
ENSOCUG00000014529	PARP4	62	56.554	ENSGMOG00000001674	parp4	72	56.554	Gadus_morhua
ENSOCUG00000014529	PARP4	83	58.124	ENSGALG00000034473	PARP4	86	58.124	Gallus_gallus
ENSOCUG00000014529	PARP4	74	44.591	ENSGACG00000008521	parp4	80	44.110	Gasterosteus_aculeatus
ENSOCUG00000014529	PARP4	73	62.611	ENSGAGG00000006063	PARP4	78	62.611	Gopherus_agassizii
ENSOCUG00000014529	PARP4	96	64.448	ENSGGOG00000002940	PARP4	89	73.688	Gorilla_gorilla
ENSOCUG00000014529	PARP4	58	51.921	ENSHBUG00000018539	parp4	97	51.886	Haplochromis_burtoni
ENSOCUG00000014529	PARP4	93	75.774	ENSHGLG00000008309	PARP4	84	75.774	Heterocephalus_glaber_female
ENSOCUG00000014529	PARP4	93	75.774	ENSHGLG00100012331	PARP4	84	75.774	Heterocephalus_glaber_male
ENSOCUG00000014529	PARP4	75	42.222	ENSHCOG00000017842	parp4	77	42.891	Hippocampus_comes
ENSOCUG00000014529	PARP4	76	45.942	ENSIPUG00000003181	parp4	77	45.898	Ictalurus_punctatus
ENSOCUG00000014529	PARP4	84	75.134	ENSSTOG00000027869	PARP4	86	78.240	Ictidomys_tridecemlineatus
ENSOCUG00000014529	PARP4	56	49.459	ENSKMAG00000018334	parp4	96	49.459	Kryptolebias_marmoratus
ENSOCUG00000014529	PARP4	75	45.680	ENSLBEG00000013362	parp4	72	45.760	Labrus_bergylta
ENSOCUG00000014529	PARP4	76	50.695	ENSLACG00000005075	-	80	50.695	Latimeria_chalumnae
ENSOCUG00000014529	PARP4	76	49.353	ENSLOCG00000010789	parp4	82	49.121	Lepisosteus_oculatus
ENSOCUG00000014529	PARP4	68	78.595	ENSLAFG00000002022	-	100	79.631	Loxodonta_africana
ENSOCUG00000014529	PARP4	99	66.411	ENSMMUG00000012297	PARP4	98	76.065	Macaca_mulatta
ENSOCUG00000014529	PARP4	91	64.557	ENSMNEG00000044999	PARP4	98	74.541	Macaca_nemestrina
ENSOCUG00000014529	PARP4	67	44.408	ENSMAMG00000020871	parp4	93	44.408	Mastacembelus_armatus
ENSOCUG00000014529	PARP4	72	45.476	ENSMZEG00005014412	parp4	71	45.476	Maylandia_zebra
ENSOCUG00000014529	PARP4	78	58.046	ENSMGAG00000015136	PARP4	88	58.046	Meleagris_gallopavo
ENSOCUG00000014529	PARP4	83	69.281	ENSMICG00000028028	PARP4	87	76.233	Microcebus_murinus
ENSOCUG00000014529	PARP4	76	76.350	ENSMOCG00000016582	Parp4	81	74.353	Microtus_ochrogaster
ENSOCUG00000014529	PARP4	74	42.928	ENSMMOG00000019397	parp4	95	47.727	Mola_mola
ENSOCUG00000014529	PARP4	84	66.026	ENSMODG00000007894	PARP4	79	65.764	Monodelphis_domestica
ENSOCUG00000014529	PARP4	58	45.370	ENSMALG00000004027	parp4	99	45.370	Monopterus_albus
ENSOCUG00000014529	PARP4	77	75.123	MGP_CAROLIEiJ_G0019339	-	71	75.205	Mus_caroli
ENSOCUG00000014529	PARP4	77	75.450	ENSMUSG00000054509	Parp4	70	75.532	Mus_musculus
ENSOCUG00000014529	PARP4	77	75.941	MGP_PahariEiJ_G0030357	Parp4	72	76.023	Mus_pahari
ENSOCUG00000014529	PARP4	77	74.877	MGP_SPRETEiJ_G0020230	Parp4	71	74.959	Mus_spretus
ENSOCUG00000014529	PARP4	71	77.852	ENSMPUG00000013318	PARP4	84	77.160	Mustela_putorius_furo
ENSOCUG00000014529	PARP4	99	65.088	ENSMLUG00000003797	PARP4	99	74.924	Myotis_lucifugus
ENSOCUG00000014529	PARP4	54	86.441	ENSMEUG00000015644	-	87	86.441	Notamacropus_eugenii
ENSOCUG00000014529	PARP4	74	46.824	ENSONIG00000010261	parp4	77	46.824	Oreochromis_niloticus
ENSOCUG00000014529	PARP4	54	49.289	ENSORLG00000018162	parp4	88	49.289	Oryzias_latipes
ENSOCUG00000014529	PARP4	54	50.513	ENSORLG00020011392	parp4	88	50.513	Oryzias_latipes_hni
ENSOCUG00000014529	PARP4	67	45.946	ENSORLG00015007534	parp4	95	45.946	Oryzias_latipes_hsok
ENSOCUG00000014529	PARP4	75	46.479	ENSOMEG00000012305	parp4	88	46.479	Oryzias_melastigma
ENSOCUG00000014529	PARP4	80	78.036	ENSOGAG00000016230	PARP4	88	76.577	Otolemur_garnettii
ENSOCUG00000014529	PARP4	85	69.928	ENSOARG00000014415	PARP4	87	71.793	Ovis_aries
ENSOCUG00000014529	PARP4	94	72.241	ENSPPAG00000024134	PARP4	88	75.166	Pan_paniscus
ENSOCUG00000014529	PARP4	81	78.036	ENSPPRG00000009047	PARP4	86	78.036	Panthera_pardus
ENSOCUG00000014529	PARP4	99	65.313	ENSPTRG00000005711	PARP4	88	75.240	Pan_troglodytes
ENSOCUG00000014529	PARP4	99	66.447	ENSPANG00000006504	PARP4	96	77.266	Papio_anubis
ENSOCUG00000014529	PARP4	72	57.914	ENSPSIG00000014196	PARP4	80	57.914	Pelodiscus_sinensis
ENSOCUG00000014529	PARP4	56	50.000	ENSPMGG00000007212	parp4	81	49.436	Periophthalmus_magnuspinnatus
ENSOCUG00000014529	PARP4	78	76.735	ENSPEMG00000012639	Parp4	76	76.735	Peromyscus_maniculatus_bairdii
ENSOCUG00000014529	PARP4	53	40.346	ENSPMAG00000008938	-	100	40.346	Petromyzon_marinus
ENSOCUG00000014529	PARP4	73	63.652	ENSPCIG00000017800	-	98	66.229	Phascolarctos_cinereus
ENSOCUG00000014529	PARP4	74	46.727	ENSPFOG00000002081	parp4	99	46.743	Poecilia_formosa
ENSOCUG00000014529	PARP4	54	50.409	ENSPLAG00000021665	parp4	88	48.790	Poecilia_latipinna
ENSOCUG00000014529	PARP4	58	48.654	ENSPLAG00000019059	parp4	91	48.654	Poecilia_latipinna
ENSOCUG00000014529	PARP4	58	48.551	ENSPMEG00000016931	-	91	48.551	Poecilia_mexicana
ENSOCUG00000014529	PARP4	54	49.185	ENSPMEG00000017006	parp4	88	48.120	Poecilia_mexicana
ENSOCUG00000014529	PARP4	78	76.350	ENSPCOG00000022852	PARP4	94	76.350	Propithecus_coquereli
ENSOCUG00000014529	PARP4	88	70.760	ENSPVAG00000016461	PARP4	87	70.760	Pteropus_vampyrus
ENSOCUG00000014529	PARP4	72	45.565	ENSPNYG00000015691	parp4	68	45.565	Pundamilia_nyererei
ENSOCUG00000014529	PARP4	54	51.182	ENSPNAG00000019054	parp4	64	51.184	Pygocentrus_nattereri
ENSOCUG00000014529	PARP4	99	65.225	ENSRBIG00000040334	PARP4	86	76.133	Rhinopithecus_bieti
ENSOCUG00000014529	PARP4	99	64.020	ENSRROG00000040417	PARP4	86	74.471	Rhinopithecus_roxellana
ENSOCUG00000014529	PARP4	62	50.815	ENSSDUG00000014635	parp4	88	50.815	Seriola_dumerili
ENSOCUG00000014529	PARP4	67	46.080	ENSSLDG00000022915	parp4	72	46.080	Seriola_lalandi_dorsalis
ENSOCUG00000014529	PARP4	63	47.685	ENSSPAG00000010424	parp4	90	47.685	Stegastes_partitus
ENSOCUG00000014529	PARP4	78	73.723	ENSSSCG00000022957	PARP4	75	73.655	Sus_scrofa
ENSOCUG00000014529	PARP4	75	45.130	ENSTNIG00000015654	parp4	100	44.822	Tetraodon_nigroviridis
ENSOCUG00000014529	PARP4	58	76.420	ENSUAMG00000027134	-	95	74.483	Ursus_americanus
ENSOCUG00000014529	PARP4	81	76.643	ENSUMAG00000013978	PARP4	86	76.643	Ursus_maritimus
ENSOCUG00000014529	PARP4	75	81.818	ENSVVUG00000006363	PARP4	85	81.818	Vulpes_vulpes
ENSOCUG00000014529	PARP4	67	50.406	ENSXETG00000002639	-	96	50.406	Xenopus_tropicalis