EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000015067 (Gene tree)
Gene ID: 100355856
Gene Symbol: POLR3F
Alias: -
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 13398 bases
Position: chr4:17915883-17929280
Accession: 100355856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000012947	RNA_pol_Rpc34	PF05158.12	1.3e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000015066	POLR3F-201	2347	XM_002710953	ENSOCUP00000012947	316 (aa)	XP_002710999	G1T8N5

Gene Model

Click here to download ENSOCUG00000015067's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03020	RNA polymerase	KEGG
ocu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000015067's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000015067	POLR3F	100	99.367	ENSG00000132664	POLR3F	100	99.367	Homo_sapiens
ENSOCUG00000015067	POLR3F	100	85.759	ENSAPOG00000008271	polr3f	100	85.759	Acanthochromis_polyacanthus
ENSOCUG00000015067	POLR3F	100	99.051	ENSAMEG00000005222	POLR3F	100	99.051	Ailuropoda_melanoleuca
ENSOCUG00000015067	POLR3F	100	80.380	ENSACIG00000006705	polr3f	100	80.380	Amphilophus_citrinellus
ENSOCUG00000015067	POLR3F	100	85.759	ENSAOCG00000000687	polr3f	100	85.759	Amphiprion_ocellaris
ENSOCUG00000015067	POLR3F	100	85.443	ENSAPEG00000015263	polr3f	100	85.443	Amphiprion_percula
ENSOCUG00000015067	POLR3F	87	89.091	ENSATEG00000015539	polr3f	100	89.091	Anabas_testudineus
ENSOCUG00000015067	POLR3F	87	95.636	ENSAPLG00000005533	POLR3F	100	95.636	Anas_platyrhynchos
ENSOCUG00000015067	POLR3F	96	92.409	ENSACAG00000014293	POLR3F	98	92.409	Anolis_carolinensis
ENSOCUG00000015067	POLR3F	100	99.051	ENSANAG00000026726	POLR3F	100	99.051	Aotus_nancymaae
ENSOCUG00000015067	POLR3F	100	87.025	ENSACLG00000003615	polr3f	100	87.025	Astatotilapia_calliptera
ENSOCUG00000015067	POLR3F	100	87.658	ENSAMXG00000036020	polr3f	100	87.658	Astyanax_mexicanus
ENSOCUG00000015067	POLR3F	100	99.367	ENSBTAG00000008825	POLR3F	100	99.367	Bos_taurus
ENSOCUG00000015067	POLR3F	94	34.114	WBGene00021112	W09C3.4	95	34.114	Caenorhabditis_elegans
ENSOCUG00000015067	POLR3F	100	99.051	ENSCJAG00000005159	POLR3F	100	99.051	Callithrix_jacchus
ENSOCUG00000015067	POLR3F	100	98.734	ENSCAFG00000005420	POLR3F	100	98.734	Canis_familiaris
ENSOCUG00000015067	POLR3F	100	98.734	ENSCAFG00020027500	POLR3F	100	98.734	Canis_lupus_dingo
ENSOCUG00000015067	POLR3F	100	99.367	ENSCHIG00000014743	POLR3F	100	99.367	Capra_hircus
ENSOCUG00000015067	POLR3F	100	99.051	ENSTSYG00000004207	POLR3F	100	99.051	Carlito_syrichta
ENSOCUG00000015067	POLR3F	93	55.743	ENSCAPG00000008423	POLR3F	100	55.743	Cavia_aperea
ENSOCUG00000015067	POLR3F	100	98.418	ENSCPOG00000002400	POLR3F	100	98.418	Cavia_porcellus
ENSOCUG00000015067	POLR3F	100	87.975	ENSCCAG00000021800	POLR3F	100	87.975	Cebus_capucinus
ENSOCUG00000015067	POLR3F	100	99.684	ENSCATG00000019507	POLR3F	100	99.684	Cercocebus_atys
ENSOCUG00000015067	POLR3F	100	99.051	ENSCLAG00000016296	POLR3F	100	99.051	Chinchilla_lanigera
ENSOCUG00000015067	POLR3F	100	99.684	ENSCSAG00000011513	POLR3F	100	99.684	Chlorocebus_sabaeus
ENSOCUG00000015067	POLR3F	73	97.902	ENSCHOG00000013268	POLR3F	73	97.902	Choloepus_hoffmanni
ENSOCUG00000015067	POLR3F	87	94.182	ENSCPBG00000023473	POLR3F	100	94.182	Chrysemys_picta_bellii
ENSOCUG00000015067	POLR3F	99	60.952	ENSCING00000001212	-	99	60.952	Ciona_intestinalis
ENSOCUG00000015067	POLR3F	70	59.193	ENSCSAVG00000003340	-	96	66.272	Ciona_savignyi
ENSOCUG00000015067	POLR3F	92	99.656	ENSCANG00000037390	POLR3F	100	99.656	Colobus_angolensis_palliatus
ENSOCUG00000015067	POLR3F	100	98.101	ENSCGRG00001002032	Polr3f	100	98.101	Cricetulus_griseus_chok1gshd
ENSOCUG00000015067	POLR3F	100	98.101	ENSCGRG00000010852	Polr3f	100	98.101	Cricetulus_griseus_crigri
ENSOCUG00000015067	POLR3F	100	84.494	ENSCSEG00000001247	polr3f	100	84.494	Cynoglossus_semilaevis
ENSOCUG00000015067	POLR3F	100	85.759	ENSCVAG00000007611	polr3f	100	85.759	Cyprinodon_variegatus
ENSOCUG00000015067	POLR3F	100	88.608	ENSDARG00000012572	polr3f	100	88.608	Danio_rerio
ENSOCUG00000015067	POLR3F	100	95.886	ENSDNOG00000010719	POLR3F	100	95.886	Dasypus_novemcinctus
ENSOCUG00000015067	POLR3F	100	98.734	ENSDORG00000016352	Polr3f	100	98.734	Dipodomys_ordii
ENSOCUG00000015067	POLR3F	95	49.667	FBgn0038951	CG5380	99	49.667	Drosophila_melanogaster
ENSOCUG00000015067	POLR3F	89	60.854	ENSETEG00000015485	-	100	60.854	Echinops_telfairi
ENSOCUG00000015067	POLR3F	96	77.228	ENSEBUG00000006783	polr3f	97	77.228	Eptatretus_burgeri
ENSOCUG00000015067	POLR3F	100	99.367	ENSEASG00005002022	POLR3F	100	99.367	Equus_asinus_asinus
ENSOCUG00000015067	POLR3F	100	99.367	ENSECAG00000009920	POLR3F	100	99.367	Equus_caballus
ENSOCUG00000015067	POLR3F	80	92.000	ENSEEUG00000000184	POLR3F	80	92.000	Erinaceus_europaeus
ENSOCUG00000015067	POLR3F	100	89.241	ENSELUG00000001558	polr3f	100	89.241	Esox_lucius
ENSOCUG00000015067	POLR3F	100	99.051	ENSFCAG00000013828	POLR3F	100	99.051	Felis_catus
ENSOCUG00000015067	POLR3F	87	96.000	ENSFALG00000007623	POLR3F	100	96.000	Ficedula_albicollis
ENSOCUG00000015067	POLR3F	100	98.734	ENSFDAG00000002528	POLR3F	100	98.734	Fukomys_damarensis
ENSOCUG00000015067	POLR3F	100	83.228	ENSFHEG00000006450	polr3f	100	83.228	Fundulus_heteroclitus
ENSOCUG00000015067	POLR3F	100	93.987	ENSGALG00000008749	POLR3F	100	93.987	Gallus_gallus
ENSOCUG00000015067	POLR3F	100	84.810	ENSGAFG00000003698	polr3f	100	84.810	Gambusia_affinis
ENSOCUG00000015067	POLR3F	100	92.722	ENSGAGG00000006151	POLR3F	100	92.722	Gopherus_agassizii
ENSOCUG00000015067	POLR3F	100	99.367	ENSGGOG00000011543	POLR3F	100	99.367	Gorilla_gorilla
ENSOCUG00000015067	POLR3F	100	87.342	ENSHBUG00000013806	polr3f	100	87.342	Haplochromis_burtoni
ENSOCUG00000015067	POLR3F	100	98.418	ENSHGLG00000011867	POLR3F	100	98.418	Heterocephalus_glaber_female
ENSOCUG00000015067	POLR3F	100	98.418	ENSHGLG00100012577	POLR3F	100	98.418	Heterocephalus_glaber_male
ENSOCUG00000015067	POLR3F	100	77.215	ENSHCOG00000011751	polr3f	100	77.215	Hippocampus_comes
ENSOCUG00000015067	POLR3F	98	87.781	ENSIPUG00000013347	polr3f	99	87.781	Ictalurus_punctatus
ENSOCUG00000015067	POLR3F	100	99.051	ENSSTOG00000013588	POLR3F	100	99.051	Ictidomys_tridecemlineatus
ENSOCUG00000015067	POLR3F	100	98.418	ENSJJAG00000017513	Polr3f	100	98.418	Jaculus_jaculus
ENSOCUG00000015067	POLR3F	87	81.455	ENSKMAG00000016495	polr3f	100	81.455	Kryptolebias_marmoratus
ENSOCUG00000015067	POLR3F	73	91.810	ENSLBEG00000011998	polr3f	100	91.810	Labrus_bergylta
ENSOCUG00000015067	POLR3F	100	89.241	ENSLACG00000009371	POLR3F	100	89.241	Latimeria_chalumnae
ENSOCUG00000015067	POLR3F	100	90.190	ENSLOCG00000015701	polr3f	100	90.190	Lepisosteus_oculatus
ENSOCUG00000015067	POLR3F	100	99.051	ENSLAFG00000004929	POLR3F	100	99.051	Loxodonta_africana
ENSOCUG00000015067	POLR3F	100	99.684	ENSMFAG00000002227	POLR3F	100	99.684	Macaca_fascicularis
ENSOCUG00000015067	POLR3F	87	100.000	ENSMMUG00000004143	POLR3F	100	100.000	Macaca_mulatta
ENSOCUG00000015067	POLR3F	100	99.684	ENSMNEG00000033404	POLR3F	100	99.684	Macaca_nemestrina
ENSOCUG00000015067	POLR3F	100	99.684	ENSMLEG00000021905	POLR3F	100	99.684	Mandrillus_leucophaeus
ENSOCUG00000015067	POLR3F	100	86.392	ENSMAMG00000017975	polr3f	100	86.392	Mastacembelus_armatus
ENSOCUG00000015067	POLR3F	100	86.709	ENSMZEG00005015134	polr3f	100	86.709	Maylandia_zebra
ENSOCUG00000015067	POLR3F	100	93.671	ENSMGAG00000006691	POLR3F	100	93.671	Meleagris_gallopavo
ENSOCUG00000015067	POLR3F	100	98.418	ENSMAUG00000020176	Polr3f	100	98.418	Mesocricetus_auratus
ENSOCUG00000015067	POLR3F	100	99.051	ENSMICG00000044519	POLR3F	100	99.051	Microcebus_murinus
ENSOCUG00000015067	POLR3F	100	98.101	ENSMOCG00000018352	Polr3f	100	98.101	Microtus_ochrogaster
ENSOCUG00000015067	POLR3F	93	88.215	ENSMMOG00000018477	polr3f	100	88.215	Mola_mola
ENSOCUG00000015067	POLR3F	100	98.101	ENSMODG00000005624	POLR3F	100	98.101	Monodelphis_domestica
ENSOCUG00000015067	POLR3F	100	87.342	ENSMALG00000006685	polr3f	100	87.342	Monopterus_albus
ENSOCUG00000015067	POLR3F	100	98.101	MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	Mus_caroli
ENSOCUG00000015067	POLR3F	100	98.101	ENSMUSG00000027427	Polr3f	100	98.101	Mus_musculus
ENSOCUG00000015067	POLR3F	100	98.101	MGP_PahariEiJ_G0025829	Polr3f	100	98.101	Mus_pahari
ENSOCUG00000015067	POLR3F	100	98.101	MGP_SPRETEiJ_G0025304	Polr3f	100	98.101	Mus_spretus
ENSOCUG00000015067	POLR3F	100	76.923	ENSMPUG00000001252	-	100	76.923	Mustela_putorius_furo
ENSOCUG00000015067	POLR3F	100	98.734	ENSMLUG00000014844	POLR3F	100	98.734	Myotis_lucifugus
ENSOCUG00000015067	POLR3F	100	98.418	ENSNGAG00000010898	Polr3f	100	98.418	Nannospalax_galili
ENSOCUG00000015067	POLR3F	100	87.658	ENSNBRG00000020796	polr3f	100	87.658	Neolamprologus_brichardi
ENSOCUG00000015067	POLR3F	100	99.367	ENSNLEG00000009778	POLR3F	100	99.367	Nomascus_leucogenys
ENSOCUG00000015067	POLR3F	93	91.864	ENSMEUG00000010320	POLR3F	100	91.864	Notamacropus_eugenii
ENSOCUG00000015067	POLR3F	100	97.468	ENSOPRG00000003385	POLR3F	100	97.468	Ochotona_princeps
ENSOCUG00000015067	POLR3F	100	98.734	ENSODEG00000011521	POLR3F	100	98.734	Octodon_degus
ENSOCUG00000015067	POLR3F	100	86.076	ENSONIG00000006858	polr3f	100	86.076	Oreochromis_niloticus
ENSOCUG00000015067	POLR3F	100	96.203	ENSOANG00000001253	POLR3F	100	96.203	Ornithorhynchus_anatinus
ENSOCUG00000015067	POLR3F	100	85.127	ENSORLG00000022412	polr3f	100	85.127	Oryzias_latipes
ENSOCUG00000015067	POLR3F	100	85.127	ENSORLG00020021944	polr3f	100	85.127	Oryzias_latipes_hni
ENSOCUG00000015067	POLR3F	100	97.468	ENSOGAG00000002916	POLR3F	100	97.468	Otolemur_garnettii
ENSOCUG00000015067	POLR3F	100	99.367	ENSOARG00000000315	-	100	99.367	Ovis_aries
ENSOCUG00000015067	POLR3F	100	62.975	ENSOARG00000008647	-	100	62.975	Ovis_aries
ENSOCUG00000015067	POLR3F	100	99.367	ENSPPAG00000036681	POLR3F	100	99.367	Pan_paniscus
ENSOCUG00000015067	POLR3F	100	99.051	ENSPPRG00000024604	POLR3F	100	99.051	Panthera_pardus
ENSOCUG00000015067	POLR3F	100	99.051	ENSPTIG00000020292	POLR3F	100	99.051	Panthera_tigris_altaica
ENSOCUG00000015067	POLR3F	100	99.367	ENSPTRG00000013287	POLR3F	100	99.367	Pan_troglodytes
ENSOCUG00000015067	POLR3F	100	99.684	ENSPANG00000025015	POLR3F	100	99.684	Papio_anubis
ENSOCUG00000015067	POLR3F	100	87.975	ENSPKIG00000004427	polr3f	100	87.975	Paramormyrops_kingsleyae
ENSOCUG00000015067	POLR3F	87	95.273	ENSPSIG00000016613	POLR3F	100	95.273	Pelodiscus_sinensis
ENSOCUG00000015067	POLR3F	100	54.232	ENSPMGG00000018350	polr3f	100	56.329	Periophthalmus_magnuspinnatus
ENSOCUG00000015067	POLR3F	100	98.418	ENSPEMG00000006966	Polr3f	100	98.418	Peromyscus_maniculatus_bairdii
ENSOCUG00000015067	POLR3F	100	80.063	ENSPMAG00000005530	polr3f	100	80.063	Petromyzon_marinus
ENSOCUG00000015067	POLR3F	100	98.418	ENSPCIG00000000908	POLR3F	85	98.418	Phascolarctos_cinereus
ENSOCUG00000015067	POLR3F	100	84.810	ENSPFOG00000018334	polr3f	100	84.810	Poecilia_formosa
ENSOCUG00000015067	POLR3F	100	84.810	ENSPLAG00000021803	polr3f	100	84.810	Poecilia_latipinna
ENSOCUG00000015067	POLR3F	100	84.810	ENSPMEG00000013150	polr3f	100	84.810	Poecilia_mexicana
ENSOCUG00000015067	POLR3F	100	84.810	ENSPREG00000005278	polr3f	100	84.810	Poecilia_reticulata
ENSOCUG00000015067	POLR3F	100	99.367	ENSPPYG00000010737	POLR3F	100	99.367	Pongo_abelii
ENSOCUG00000015067	POLR3F	66	99.324	ENSPCAG00000004893	POLR3F	71	99.324	Procavia_capensis
ENSOCUG00000015067	POLR3F	100	99.051	ENSPCOG00000004543	POLR3F	100	99.051	Propithecus_coquereli
ENSOCUG00000015067	POLR3F	100	98.734	ENSPVAG00000000403	POLR3F	100	98.734	Pteropus_vampyrus
ENSOCUG00000015067	POLR3F	100	87.342	ENSPNYG00000016276	polr3f	100	87.342	Pundamilia_nyererei
ENSOCUG00000015067	POLR3F	100	88.291	ENSPNAG00000005164	polr3f	100	88.291	Pygocentrus_nattereri
ENSOCUG00000015067	POLR3F	100	98.418	ENSRNOG00000007548	Polr3f	85	98.418	Rattus_norvegicus
ENSOCUG00000015067	POLR3F	100	99.684	ENSRBIG00000021268	POLR3F	100	99.684	Rhinopithecus_bieti
ENSOCUG00000015067	POLR3F	100	99.684	ENSRROG00000039911	POLR3F	100	99.684	Rhinopithecus_roxellana
ENSOCUG00000015067	POLR3F	100	99.051	ENSSBOG00000018207	POLR3F	100	99.051	Saimiri_boliviensis_boliviensis
ENSOCUG00000015067	POLR3F	100	77.918	ENSSHAG00000018160	POLR3F	100	76.972	Sarcophilus_harrisii
ENSOCUG00000015067	POLR3F	100	89.557	ENSSFOG00015022433	polr3f	100	89.557	Scleropages_formosus
ENSOCUG00000015067	POLR3F	100	85.759	ENSSMAG00000021029	polr3f	100	85.759	Scophthalmus_maximus
ENSOCUG00000015067	POLR3F	100	77.215	ENSSDUG00000022435	polr3f	100	77.215	Seriola_dumerili
ENSOCUG00000015067	POLR3F	100	87.025	ENSSLDG00000012761	polr3f	100	87.025	Seriola_lalandi_dorsalis
ENSOCUG00000015067	POLR3F	100	88.924	ENSSARG00000006039	POLR3F	100	88.924	Sorex_araneus
ENSOCUG00000015067	POLR3F	100	93.354	ENSSPUG00000001873	POLR3F	100	93.354	Sphenodon_punctatus
ENSOCUG00000015067	POLR3F	100	78.165	ENSSPAG00000002092	polr3f	100	78.165	Stegastes_partitus
ENSOCUG00000015067	POLR3F	100	98.418	ENSSSCG00000007095	POLR3F	100	98.418	Sus_scrofa
ENSOCUG00000015067	POLR3F	100	93.354	ENSTGUG00000005839	POLR3F	100	93.354	Taeniopygia_guttata
ENSOCUG00000015067	POLR3F	100	85.127	ENSTRUG00000012101	polr3f	100	85.127	Takifugu_rubripes
ENSOCUG00000015067	POLR3F	100	83.861	ENSTNIG00000006456	polr3f	100	83.861	Tetraodon_nigroviridis
ENSOCUG00000015067	POLR3F	100	82.911	ENSTBEG00000007921	POLR3F	100	82.911	Tupaia_belangeri
ENSOCUG00000015067	POLR3F	100	98.734	ENSTTRG00000002580	POLR3F	100	98.734	Tursiops_truncatus
ENSOCUG00000015067	POLR3F	53	98.193	ENSUAMG00000024166	POLR3F	100	98.193	Ursus_americanus
ENSOCUG00000015067	POLR3F	100	98.734	ENSUMAG00000024944	POLR3F	100	98.734	Ursus_maritimus
ENSOCUG00000015067	POLR3F	100	98.101	ENSVPAG00000009063	POLR3F	100	98.101	Vicugna_pacos
ENSOCUG00000015067	POLR3F	100	98.734	ENSVVUG00000012925	POLR3F	100	98.734	Vulpes_vulpes
ENSOCUG00000015067	POLR3F	100	89.241	ENSXETG00000024898	polr3f	100	89.241	Xenopus_tropicalis
ENSOCUG00000015067	POLR3F	87	86.909	ENSXCOG00000010301	polr3f	100	86.909	Xiphophorus_couchianus
ENSOCUG00000015067	POLR3F	100	85.127	ENSXMAG00000004604	polr3f	100	85.127	Xiphophorus_maculatus