EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000015081 (Gene tree)
Gene ID: 100354916
Gene Symbol: SNRNP70
Alias: -
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 21384 bases
Position: chrGL019028:38-21421
Accession: 11150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000012958	RRM_1	PF00076.22	4.3e-18	1	1
ENSOCUP00000012958	U1snRNP70_N	PF12220.8	7.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000015079	SNRNP70-201	4760	-	ENSOCUP00000012958	457 (aa)	-	G1T8P3

Gene Model

Click here to download ENSOCUG00000015081's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000015081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000015081	SNRNP70	85	92.268	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSOCUG00000015081	SNRNP70	50	96.104	ENSAMEG00000014468	SNRNP70	53	94.372	Ailuropoda_melanoleuca
ENSOCUG00000015081	SNRNP70	50	100.000	ENSANAG00000036787	SNRNP70	99	97.561	Aotus_nancymaae
ENSOCUG00000015081	SNRNP70	81	92.683	ENSCJAG00000000193	SNRNP70	99	98.814	Callithrix_jacchus
ENSOCUG00000015081	SNRNP70	50	100.000	ENSCAFG00000003711	SNRNP70	99	97.561	Canis_familiaris
ENSOCUG00000015081	SNRNP70	50	96.983	ENSCAFG00020025470	SNRNP70	99	93.373	Canis_lupus_dingo
ENSOCUG00000015081	SNRNP70	50	100.000	ENSCPOG00000019589	SNRNP70	52	100.000	Cavia_porcellus
ENSOCUG00000015081	SNRNP70	85	92.268	ENSCATG00000016149	SNRNP70	84	92.268	Cercocebus_atys
ENSOCUG00000015081	SNRNP70	81	93.225	ENSCLAG00000007991	SNRNP70	53	100.000	Chinchilla_lanigera
ENSOCUG00000015081	SNRNP70	85	89.948	ENSCSAG00000002759	SNRNP70	83	89.948	Chlorocebus_sabaeus
ENSOCUG00000015081	SNRNP70	85	92.268	ENSCANG00000036607	SNRNP70	99	99.187	Colobus_angolensis_palliatus
ENSOCUG00000015081	SNRNP70	50	100.000	ENSCGRG00001020676	Snrnp70	52	100.000	Cricetulus_griseus_chok1gshd
ENSOCUG00000015081	SNRNP70	50	100.000	ENSCGRG00000018048	Snrnp70	52	100.000	Cricetulus_griseus_crigri
ENSOCUG00000015081	SNRNP70	50	100.000	ENSDORG00000010228	Snrnp70	52	100.000	Dipodomys_ordii
ENSOCUG00000015081	SNRNP70	50	100.000	ENSEASG00005004917	SNRNP70	53	100.000	Equus_asinus_asinus
ENSOCUG00000015081	SNRNP70	50	100.000	ENSFCAG00000042603	SNRNP70	55	100.000	Felis_catus
ENSOCUG00000015081	SNRNP70	76	94.633	ENSFDAG00000013830	SNRNP70	95	97.531	Fukomys_damarensis
ENSOCUG00000015081	SNRNP70	85	92.268	ENSGGOG00000008245	SNRNP70	99	97.561	Gorilla_gorilla
ENSOCUG00000015081	SNRNP70	50	100.000	ENSJJAG00000002614	Snrnp70	52	100.000	Jaculus_jaculus
ENSOCUG00000015081	SNRNP70	51	100.000	ENSLAFG00000028536	SNRNP70	100	100.000	Loxodonta_africana
ENSOCUG00000015081	SNRNP70	85	92.268	ENSMFAG00000039824	SNRNP70	84	92.268	Macaca_fascicularis
ENSOCUG00000015081	SNRNP70	85	89.948	ENSMMUG00000004928	SNRNP70	99	97.561	Macaca_mulatta
ENSOCUG00000015081	SNRNP70	85	89.433	ENSMNEG00000038057	SNRNP70	83	89.433	Macaca_nemestrina
ENSOCUG00000015081	SNRNP70	85	92.268	ENSMLEG00000030967	SNRNP70	84	92.268	Mandrillus_leucophaeus
ENSOCUG00000015081	SNRNP70	50	100.000	ENSMAUG00000020970	Snrnp70	52	100.000	Mesocricetus_auratus
ENSOCUG00000015081	SNRNP70	83	93.438	ENSMICG00000038437	SNRNP70	100	99.190	Microcebus_murinus
ENSOCUG00000015081	SNRNP70	85	95.103	ENSMOCG00000012825	Snrnp70	84	95.103	Microtus_ochrogaster
ENSOCUG00000015081	SNRNP70	50	100.000	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSOCUG00000015081	SNRNP70	50	100.000	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSOCUG00000015081	SNRNP70	50	100.000	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSOCUG00000015081	SNRNP70	50	100.000	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSOCUG00000015081	SNRNP70	50	100.000	ENSMPUG00000003258	SNRNP70	53	100.000	Mustela_putorius_furo
ENSOCUG00000015081	SNRNP70	50	100.000	ENSMLUG00000011766	SNRNP70	53	100.000	Myotis_lucifugus
ENSOCUG00000015081	SNRNP70	50	100.000	ENSNGAG00000021191	Snrnp70	95	97.531	Nannospalax_galili
ENSOCUG00000015081	SNRNP70	84	92.147	ENSNLEG00000004899	SNRNP70	98	98.770	Nomascus_leucogenys
ENSOCUG00000015081	SNRNP70	50	100.000	ENSODEG00000017499	SNRNP70	50	100.000	Octodon_degus
ENSOCUG00000015081	SNRNP70	50	99.567	ENSOGAG00000029310	SNRNP70	53	97.835	Otolemur_garnettii
ENSOCUG00000015081	SNRNP70	54	100.000	ENSOARG00000012608	SNRNP70	74	100.000	Ovis_aries
ENSOCUG00000015081	SNRNP70	85	92.268	ENSPPAG00000035067	SNRNP70	99	100.000	Pan_paniscus
ENSOCUG00000015081	SNRNP70	50	100.000	ENSPPRG00000005579	SNRNP70	53	100.000	Panthera_pardus
ENSOCUG00000015081	SNRNP70	85	92.268	ENSPTRG00000011277	SNRNP70	100	99.602	Pan_troglodytes
ENSOCUG00000015081	SNRNP70	85	92.268	ENSPANG00000004068	SNRNP70	84	92.268	Papio_anubis
ENSOCUG00000015081	SNRNP70	50	86.957	ENSPSIG00000015251	SNRNP70	90	85.217	Pelodiscus_sinensis
ENSOCUG00000015081	SNRNP70	50	100.000	ENSPEMG00000019011	Snrnp70	51	100.000	Peromyscus_maniculatus_bairdii
ENSOCUG00000015081	SNRNP70	85	91.753	ENSPPYG00000010234	SNRNP70	84	91.753	Pongo_abelii
ENSOCUG00000015081	SNRNP70	50	91.739	ENSPCOG00000023103	SNRNP70	82	91.739	Propithecus_coquereli
ENSOCUG00000015081	SNRNP70	81	89.702	ENSPVAG00000009578	SNRNP70	53	93.913	Pteropus_vampyrus
ENSOCUG00000015081	SNRNP70	85	92.268	ENSRBIG00000042387	SNRNP70	93	100.000	Rhinopithecus_bieti
ENSOCUG00000015081	SNRNP70	85	92.268	ENSRROG00000033636	SNRNP70	93	100.000	Rhinopithecus_roxellana
ENSOCUG00000015081	SNRNP70	81	92.954	ENSSBOG00000020026	SNRNP70	99	97.561	Saimiri_boliviensis_boliviensis
ENSOCUG00000015081	SNRNP70	85	92.268	ENSTTRG00000017099	SNRNP70	84	92.268	Tursiops_truncatus
ENSOCUG00000015081	SNRNP70	50	100.000	ENSUAMG00000016147	SNRNP70	53	100.000	Ursus_americanus
ENSOCUG00000015081	SNRNP70	70	98.833	ENSUMAG00000001467	SNRNP70	99	97.561	Ursus_maritimus
ENSOCUG00000015081	SNRNP70	50	100.000	ENSVVUG00000022976	SNRNP70	99	97.561	Vulpes_vulpes