EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000015173 (Gene tree)
Gene ID: 100359041
Gene Symbol: ZC3H13
Alias: -
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 91193 bases
Position: chr8:49112198-49203390
Accession: 100359041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000020895	zf-CCCH	PF00642.24	1.8e-07	1	1
ENSOCUP00000013050	zf-CCCH	PF00642.24	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000015183	ZC3H13-202	5085	XM_002712953	ENSOCUP00000013050	1653 (aa)	XP_002712999	G1T8W8
ENSOCUT00000027824	ZC3H13-201	4920	-	ENSOCUP00000020895	1597 (aa)	-	G1TV15

Gene Model

Click here to download ENSOCUG00000015173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000015173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000015173	ZC3H13	53	87.886	ENSAMEG00000013117	ZC3H13	100	79.844	Ailuropoda_melanoleuca
ENSOCUG00000015173	ZC3H13	53	87.429	ENSANAG00000033079	ZC3H13	100	80.311	Aotus_nancymaae
ENSOCUG00000015173	ZC3H13	53	86.976	ENSCJAG00000016756	ZC3H13	100	80.012	Callithrix_jacchus
ENSOCUG00000015173	ZC3H13	53	88.060	ENSCAFG00000004511	ZC3H13	53	87.215	Canis_familiaris
ENSOCUG00000015173	ZC3H13	53	87.385	ENSCAFG00020019269	ZC3H13	99	92.417	Canis_lupus_dingo
ENSOCUG00000015173	ZC3H13	52	84.606	ENSCHIG00000020072	ZC3H13	53	84.404	Capra_hircus
ENSOCUG00000015173	ZC3H13	53	87.112	ENSCPOG00000000646	ZC3H13	53	86.530	Cavia_porcellus
ENSOCUG00000015173	ZC3H13	53	86.521	ENSCLAG00000000610	ZC3H13	53	86.521	Chinchilla_lanigera
ENSOCUG00000015173	ZC3H13	84	93.805	ENSCHOG00000009724	ZC3H13	95	93.805	Choloepus_hoffmanni
ENSOCUG00000015173	ZC3H13	53	87.557	ENSCANG00000037422	ZC3H13	100	81.112	Colobus_angolensis_palliatus
ENSOCUG00000015173	ZC3H13	53	86.773	ENSDNOG00000005390	ZC3H13	100	77.851	Dasypus_novemcinctus
ENSOCUG00000015173	ZC3H13	52	85.731	ENSDORG00000000600	Zc3h13	53	87.615	Dipodomys_ordii
ENSOCUG00000015173	ZC3H13	50	82.421	ENSEASG00005017100	ZC3H13	100	79.737	Equus_asinus_asinus
ENSOCUG00000015173	ZC3H13	66	94.071	ENSECAG00000022843	ZC3H13	100	79.844	Equus_caballus
ENSOCUG00000015173	ZC3H13	53	87.371	ENSFCAG00000004877	ZC3H13	52	87.271	Felis_catus
ENSOCUG00000015173	ZC3H13	53	82.529	ENSFDAG00000012323	ZC3H13	52	84.073	Fukomys_damarensis
ENSOCUG00000015173	ZC3H13	84	51.929	ENSGACG00000015166	zc3h13	72	54.943	Gasterosteus_aculeatus
ENSOCUG00000015173	ZC3H13	50	73.140	ENSGGOG00000005496	ZC3H13	100	80.659	Gorilla_gorilla
ENSOCUG00000015173	ZC3H13	53	86.797	ENSHGLG00000006309	ZC3H13	53	87.141	Heterocephalus_glaber_female
ENSOCUG00000015173	ZC3H13	54	82.594	ENSHGLG00100007460	ZC3H13	50	86.738	Heterocephalus_glaber_male
ENSOCUG00000015173	ZC3H13	53	88.229	ENSSTOG00000029682	ZC3H13	53	88.343	Ictidomys_tridecemlineatus
ENSOCUG00000015173	ZC3H13	52	84.971	ENSJJAG00000019971	Zc3h13	100	77.443	Jaculus_jaculus
ENSOCUG00000015173	ZC3H13	53	38.553	ENSKMAG00000010701	zc3h13	77	46.185	Kryptolebias_marmoratus
ENSOCUG00000015173	ZC3H13	62	65.771	ENSLACG00000003806	ZC3H13	57	64.356	Latimeria_chalumnae
ENSOCUG00000015173	ZC3H13	58	90.492	ENSMLEG00000039387	ZC3H13	99	92.095	Mandrillus_leucophaeus
ENSOCUG00000015173	ZC3H13	52	83.890	MGP_CAROLIEiJ_G0019512	Zc3h13	78	88.521	Mus_caroli
ENSOCUG00000015173	ZC3H13	52	83.659	ENSMUSG00000022000	Zc3h13	79	88.716	Mus_musculus
ENSOCUG00000015173	ZC3H13	52	83.774	MGP_PahariEiJ_G0030530	Zc3h13	79	88.716	Mus_pahari
ENSOCUG00000015173	ZC3H13	52	83.659	MGP_SPRETEiJ_G0020407	Zc3h13	51	83.486	Mus_spretus
ENSOCUG00000015173	ZC3H13	53	86.567	ENSMPUG00000001602	ZC3H13	52	86.629	Mustela_putorius_furo
ENSOCUG00000015173	ZC3H13	50	79.350	ENSMLUG00000006920	ZC3H13	100	78.447	Myotis_lucifugus
ENSOCUG00000015173	ZC3H13	53	87.769	ENSNLEG00000002498	ZC3H13	100	80.981	Nomascus_leucogenys
ENSOCUG00000015173	ZC3H13	53	87.156	ENSODEG00000005178	ZC3H13	53	87.156	Octodon_degus
ENSOCUG00000015173	ZC3H13	51	40.535	ENSORLG00015014966	zc3h13	53	40.822	Oryzias_latipes_hsok
ENSOCUG00000015173	ZC3H13	53	86.881	ENSOGAG00000012032	ZC3H13	52	87.171	Otolemur_garnettii
ENSOCUG00000015173	ZC3H13	52	84.144	ENSOARG00000007790	ZC3H13	52	81.757	Ovis_aries
ENSOCUG00000015173	ZC3H13	54	82.029	ENSPPAG00000034465	ZC3H13	53	86.932	Pan_paniscus
ENSOCUG00000015173	ZC3H13	50	80.581	ENSPPRG00000005440	ZC3H13	100	76.242	Panthera_pardus
ENSOCUG00000015173	ZC3H13	50	81.047	ENSPTIG00000014867	ZC3H13	53	74.023	Panthera_tigris_altaica
ENSOCUG00000015173	ZC3H13	77	92.400	ENSPCAG00000001146	ZC3H13	76	92.369	Procavia_capensis
ENSOCUG00000015173	ZC3H13	66	96.757	ENSPVAG00000012353	ZC3H13	91	73.633	Pteropus_vampyrus
ENSOCUG00000015173	ZC3H13	52	83.601	ENSRNOG00000011237	Zc3h13	50	83.429	Rattus_norvegicus
ENSOCUG00000015173	ZC3H13	53	87.656	ENSRBIG00000010463	ZC3H13	100	80.622	Rhinopithecus_bieti
ENSOCUG00000015173	ZC3H13	60	62.457	ENSSMAG00000007110	zc3h13	72	57.977	Scophthalmus_maximus
ENSOCUG00000015173	ZC3H13	50	93.220	ENSSARG00000007106	ZC3H13	51	93.220	Sorex_araneus
ENSOCUG00000015173	ZC3H13	53	85.714	ENSSSCG00000009414	ZC3H13	52	85.550	Sus_scrofa
ENSOCUG00000015173	ZC3H13	87	53.382	ENSTNIG00000014523	zc3h13	88	58.209	Tetraodon_nigroviridis
ENSOCUG00000015173	ZC3H13	91	88.979	ENSTTRG00000003611	ZC3H13	92	88.940	Tursiops_truncatus
ENSOCUG00000015173	ZC3H13	53	86.239	ENSUMAG00000016220	ZC3H13	100	81.696	Ursus_maritimus
ENSOCUG00000015173	ZC3H13	84	92.727	ENSVPAG00000005179	ZC3H13	84	92.727	Vicugna_pacos
ENSOCUG00000015173	ZC3H13	53	88.060	ENSVVUG00000028395	ZC3H13	100	79.159	Vulpes_vulpes
ENSOCUG00000015173	ZC3H13	93	62.244	ENSXETG00000014637	zc3h13	97	61.259	Xenopus_tropicalis