EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000015340 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 666 bases
Position: chrGL018760:145441-146106
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000013179	zf-C2H2	PF00096.26	2.7e-45	1	7
ENSOCUP00000013179	zf-C2H2	PF00096.26	2.7e-45	2	7
ENSOCUP00000013179	zf-C2H2	PF00096.26	2.7e-45	3	7
ENSOCUP00000013179	zf-C2H2	PF00096.26	2.7e-45	4	7
ENSOCUP00000013179	zf-C2H2	PF00096.26	2.7e-45	5	7
ENSOCUP00000013179	zf-C2H2	PF00096.26	2.7e-45	6	7
ENSOCUP00000013179	zf-C2H2	PF00096.26	2.7e-45	7	7
ENSOCUP00000013179	zf-met	PF12874.7	1.2e-06	1	2
ENSOCUP00000013179	zf-met	PF12874.7	1.2e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000015339	-	666	-	ENSOCUP00000013179	222 (aa)	-	G1T981

Gene Model

Click here to download ENSOCUG00000015340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000015340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000015340	-	97	52.020	ENSOCUG00000029755	-	88	52.020
ENSOCUG00000015340	-	98	58.586	ENSOCUG00000029594	-	92	58.586
ENSOCUG00000015340	-	89	44.706	ENSOCUG00000017015	ZFAT	51	44.706
ENSOCUG00000015340	-	95	56.566	ENSOCUG00000027634	-	70	56.566
ENSOCUG00000015340	-	89	53.158	ENSOCUG00000029133	ZNF768	67	52.821
ENSOCUG00000015340	-	89	40.351	ENSOCUG00000011713	GTF3A	63	33.171
ENSOCUG00000015340	-	89	57.576	ENSOCUG00000017842	ZNF235	70	57.576
ENSOCUG00000015340	-	96	53.103	ENSOCUG00000007715	-	88	53.103
ENSOCUG00000015340	-	89	48.485	ENSOCUG00000029391	ZNF668	86	48.485
ENSOCUG00000015340	-	98	58.586	ENSOCUG00000001924	ZFP1	87	58.586
ENSOCUG00000015340	-	99	43.373	ENSOCUG00000009378	ZNF236	55	43.689
ENSOCUG00000015340	-	90	43.348	ENSOCUG00000005876	-	100	48.309
ENSOCUG00000015340	-	90	46.753	ENSOCUG00000005422	SNAI1	71	46.753
ENSOCUG00000015340	-	89	55.051	ENSOCUG00000003561	ZNF2	77	55.051
ENSOCUG00000015340	-	94	57.214	ENSOCUG00000029223	ZNF699	79	57.214
ENSOCUG00000015340	-	98	58.081	ENSOCUG00000029075	ZNF582	71	58.081
ENSOCUG00000015340	-	98	58.673	ENSOCUG00000029071	ZNF81	72	58.673
ENSOCUG00000015340	-	95	31.092	ENSOCUG00000024670	ZNF770	78	30.901
ENSOCUG00000015340	-	89	62.051	ENSOCUG00000029445	-	98	62.051
ENSOCUG00000015340	-	55	30.075	ENSOCUG00000023837	-	81	30.075
ENSOCUG00000015340	-	90	40.000	ENSOCUG00000013454	PRDM5	78	40.000
ENSOCUG00000015340	-	61	36.145	ENSOCUG00000012116	OVOL2	67	36.145
ENSOCUG00000015340	-	88	40.000	ENSOCUG00000012254	-	51	40.000
ENSOCUG00000015340	-	98	55.051	ENSOCUG00000029276	-	90	55.051
ENSOCUG00000015340	-	91	43.165	ENSOCUG00000002274	BCL6B	53	43.165
ENSOCUG00000015340	-	95	35.556	ENSOCUG00000014377	ZNF646	55	34.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000015340	-	100	95.067	ENSTBEG00000016819	-	80	95.067	Tupaia_belangeri