EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000015417 (Gene tree)
Gene ID: 100339047
Gene Symbol: CSTF3
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 90697 bases
Position: chr1:172443335-172534031
Accession: 100339047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000013248	Suf	PF05843.14	2e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000015419	CSTF3-201	3724	XM_002709039	ENSOCUP00000013248	717 (aa)	XP_002709085	G1T9E3

Gene Model

Click here to download ENSOCUG00000015417's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000015417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000015417	CSTF3	100	99.582	ENSG00000176102	CSTF3	100	99.582	Homo_sapiens
ENSOCUG00000015417	CSTF3	100	91.086	ENSAPOG00000014054	cstf3	100	91.086	Acanthochromis_polyacanthus
ENSOCUG00000015417	CSTF3	99	99.859	ENSAMEG00000007187	CSTF3	98	99.859	Ailuropoda_melanoleuca
ENSOCUG00000015417	CSTF3	87	85.920	ENSACIG00000005539	cstf3	100	85.920	Amphilophus_citrinellus
ENSOCUG00000015417	CSTF3	100	90.808	ENSAOCG00000010930	cstf3	100	90.808	Amphiprion_ocellaris
ENSOCUG00000015417	CSTF3	100	90.808	ENSAPEG00000007903	cstf3	100	90.808	Amphiprion_percula
ENSOCUG00000015417	CSTF3	100	90.947	ENSATEG00000000190	cstf3	100	90.947	Anabas_testudineus
ENSOCUG00000015417	CSTF3	99	98.023	ENSAPLG00000007217	CSTF3	100	98.023	Anas_platyrhynchos
ENSOCUG00000015417	CSTF3	100	95.404	ENSACAG00000002823	CSTF3	100	95.404	Anolis_carolinensis
ENSOCUG00000015417	CSTF3	100	99.582	ENSANAG00000020699	CSTF3	100	99.680	Aotus_nancymaae
ENSOCUG00000015417	CSTF3	98	91.631	ENSACLG00000007820	cstf3	100	91.086	Astatotilapia_calliptera
ENSOCUG00000015417	CSTF3	100	90.529	ENSAMXG00000014198	cstf3	100	90.808	Astyanax_mexicanus
ENSOCUG00000015417	CSTF3	100	99.582	ENSBTAG00000008617	CSTF3	100	99.703	Bos_taurus
ENSOCUG00000015417	CSTF3	97	49.452	WBGene00006307	suf-1	99	49.452	Caenorhabditis_elegans
ENSOCUG00000015417	CSTF3	100	99.582	ENSCJAG00000005533	CSTF3	100	99.680	Callithrix_jacchus
ENSOCUG00000015417	CSTF3	100	99.442	ENSCAFG00000007264	CSTF3	100	99.442	Canis_familiaris
ENSOCUG00000015417	CSTF3	99	99.718	ENSCAFG00020002715	CSTF3	99	99.718	Canis_lupus_dingo
ENSOCUG00000015417	CSTF3	98	98.151	ENSCHIG00000016418	CSTF3	100	99.680	Capra_hircus
ENSOCUG00000015417	CSTF3	99	99.295	ENSTSYG00000000451	CSTF3	100	99.295	Carlito_syrichta
ENSOCUG00000015417	CSTF3	83	95.455	ENSCAPG00000010958	CSTF3	98	95.455	Cavia_aperea
ENSOCUG00000015417	CSTF3	100	99.163	ENSCPOG00000005545	CSTF3	100	99.163	Cavia_porcellus
ENSOCUG00000015417	CSTF3	100	99.582	ENSCCAG00000024790	CSTF3	100	99.680	Cebus_capucinus
ENSOCUG00000015417	CSTF3	100	99.582	ENSCATG00000007080	CSTF3	100	99.680	Cercocebus_atys
ENSOCUG00000015417	CSTF3	100	99.582	ENSCLAG00000016179	CSTF3	100	99.582	Chinchilla_lanigera
ENSOCUG00000015417	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSOCUG00000015417	CSTF3	100	97.354	ENSCPBG00000006753	CSTF3	100	97.354	Chrysemys_picta_bellii
ENSOCUG00000015417	CSTF3	99	61.958	ENSCING00000006401	-	98	61.958	Ciona_intestinalis
ENSOCUG00000015417	CSTF3	98	61.646	ENSCSAVG00000004851	-	100	61.646	Ciona_savignyi
ENSOCUG00000015417	CSTF3	100	99.582	ENSCANG00000035468	CSTF3	100	99.680	Colobus_angolensis_palliatus
ENSOCUG00000015417	CSTF3	100	99.163	ENSCGRG00001014773	Cstf3	100	99.163	Cricetulus_griseus_chok1gshd
ENSOCUG00000015417	CSTF3	100	99.163	ENSCGRG00000004142	Cstf3	100	99.163	Cricetulus_griseus_crigri
ENSOCUG00000015417	CSTF3	100	91.074	ENSCSEG00000014283	cstf3	100	91.074	Cynoglossus_semilaevis
ENSOCUG00000015417	CSTF3	100	89.972	ENSCVAG00000019739	cstf3	100	89.972	Cyprinodon_variegatus
ENSOCUG00000015417	CSTF3	100	90.795	ENSDARG00000018904	cstf3	100	90.795	Danio_rerio
ENSOCUG00000015417	CSTF3	99	99.295	ENSDNOG00000007366	CSTF3	99	99.295	Dasypus_novemcinctus
ENSOCUG00000015417	CSTF3	99	91.819	ENSDORG00000005898	Cstf3	99	91.819	Dipodomys_ordii
ENSOCUG00000015417	CSTF3	98	57.418	FBgn0003559	su(f)	98	57.418	Drosophila_melanogaster
ENSOCUG00000015417	CSTF3	90	93.925	ENSETEG00000017097	CSTF3	90	93.925	Echinops_telfairi
ENSOCUG00000015417	CSTF3	84	74.050	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSOCUG00000015417	CSTF3	98	99.571	ENSEASG00005019884	CSTF3	100	99.571	Equus_asinus_asinus
ENSOCUG00000015417	CSTF3	98	99.571	ENSECAG00000023338	CSTF3	100	99.571	Equus_caballus
ENSOCUG00000015417	CSTF3	100	94.003	ENSEEUG00000015167	CSTF3	100	94.003	Erinaceus_europaeus
ENSOCUG00000015417	CSTF3	100	89.679	ENSELUG00000023393	cstf3	100	89.679	Esox_lucius
ENSOCUG00000015417	CSTF3	100	99.303	ENSFCAG00000030711	CSTF3	100	99.303	Felis_catus
ENSOCUG00000015417	CSTF3	93	98.649	ENSFALG00000010764	CSTF3	100	96.928	Ficedula_albicollis
ENSOCUG00000015417	CSTF3	100	99.442	ENSFDAG00000012082	CSTF3	100	99.442	Fukomys_damarensis
ENSOCUG00000015417	CSTF3	100	90.111	ENSFHEG00000020623	cstf3	100	90.111	Fundulus_heteroclitus
ENSOCUG00000015417	CSTF3	100	89.152	ENSGMOG00000012275	cstf3	100	89.152	Gadus_morhua
ENSOCUG00000015417	CSTF3	100	97.911	ENSGALG00000011685	CSTF3	100	97.911	Gallus_gallus
ENSOCUG00000015417	CSTF3	100	90.390	ENSGAFG00000002181	cstf3	100	90.390	Gambusia_affinis
ENSOCUG00000015417	CSTF3	99	90.858	ENSGACG00000015997	cstf3	99	90.858	Gasterosteus_aculeatus
ENSOCUG00000015417	CSTF3	99	97.616	ENSGAGG00000006200	CSTF3	99	97.616	Gopherus_agassizii
ENSOCUG00000015417	CSTF3	99	93.794	ENSGGOG00000026591	CSTF3	99	93.794	Gorilla_gorilla
ENSOCUG00000015417	CSTF3	98	91.631	ENSHBUG00000016656	cstf3	100	91.086	Haplochromis_burtoni
ENSOCUG00000015417	CSTF3	100	99.303	ENSHGLG00000017834	CSTF3	100	99.303	Heterocephalus_glaber_female
ENSOCUG00000015417	CSTF3	100	99.303	ENSHGLG00100018042	CSTF3	100	99.303	Heterocephalus_glaber_male
ENSOCUG00000015417	CSTF3	98	89.235	ENSHCOG00000015218	cstf3	100	88.858	Hippocampus_comes
ENSOCUG00000015417	CSTF3	100	90.098	ENSIPUG00000013170	CSTF3	100	90.098	Ictalurus_punctatus
ENSOCUG00000015417	CSTF3	100	99.582	ENSSTOG00000013306	CSTF3	100	99.582	Ictidomys_tridecemlineatus
ENSOCUG00000015417	CSTF3	99	87.308	ENSJJAG00000018430	Cstf3	99	87.308	Jaculus_jaculus
ENSOCUG00000015417	CSTF3	99	90.210	ENSKMAG00000010916	cstf3	99	90.210	Kryptolebias_marmoratus
ENSOCUG00000015417	CSTF3	99	90.665	ENSLBEG00000002306	cstf3	99	90.665	Labrus_bergylta
ENSOCUG00000015417	CSTF3	100	94.003	ENSLACG00000017296	CSTF3	100	94.003	Latimeria_chalumnae
ENSOCUG00000015417	CSTF3	100	93.305	ENSLOCG00000004415	cstf3	100	93.305	Lepisosteus_oculatus
ENSOCUG00000015417	CSTF3	100	99.442	ENSLAFG00000008712	CSTF3	100	99.442	Loxodonta_africana
ENSOCUG00000015417	CSTF3	100	99.582	ENSMFAG00000029516	CSTF3	100	99.680	Macaca_fascicularis
ENSOCUG00000015417	CSTF3	100	99.582	ENSMMUG00000002542	CSTF3	100	99.582	Macaca_mulatta
ENSOCUG00000015417	CSTF3	100	99.582	ENSMNEG00000021807	CSTF3	100	99.680	Macaca_nemestrina
ENSOCUG00000015417	CSTF3	100	99.582	ENSMLEG00000039594	CSTF3	100	99.680	Mandrillus_leucophaeus
ENSOCUG00000015417	CSTF3	100	90.808	ENSMAMG00000020423	cstf3	100	90.808	Mastacembelus_armatus
ENSOCUG00000015417	CSTF3	98	91.631	ENSMZEG00005012082	cstf3	100	91.086	Maylandia_zebra
ENSOCUG00000015417	CSTF3	100	98.050	ENSMGAG00000001383	CSTF3	100	98.050	Meleagris_gallopavo
ENSOCUG00000015417	CSTF3	100	99.024	ENSMAUG00000002487	Cstf3	100	99.024	Mesocricetus_auratus
ENSOCUG00000015417	CSTF3	100	99.582	ENSMICG00000004784	CSTF3	100	99.680	Microcebus_murinus
ENSOCUG00000015417	CSTF3	100	99.163	ENSMOCG00000017583	Cstf3	100	99.163	Microtus_ochrogaster
ENSOCUG00000015417	CSTF3	99	90.986	ENSMMOG00000016026	cstf3	95	90.986	Mola_mola
ENSOCUG00000015417	CSTF3	100	98.326	ENSMODG00000009745	-	100	98.326	Monodelphis_domestica
ENSOCUG00000015417	CSTF3	100	83.821	ENSMODG00000025205	-	100	83.821	Monodelphis_domestica
ENSOCUG00000015417	CSTF3	100	90.529	ENSMALG00000012050	cstf3	100	90.529	Monopterus_albus
ENSOCUG00000015417	CSTF3	100	99.163	MGP_CAROLIEiJ_G0024026	Cstf3	100	99.163	Mus_caroli
ENSOCUG00000015417	CSTF3	100	99.163	ENSMUSG00000027176	Cstf3	100	99.163	Mus_musculus
ENSOCUG00000015417	CSTF3	100	99.163	MGP_PahariEiJ_G0025464	Cstf3	100	99.163	Mus_pahari
ENSOCUG00000015417	CSTF3	100	99.163	MGP_SPRETEiJ_G0024939	Cstf3	100	99.163	Mus_spretus
ENSOCUG00000015417	CSTF3	100	99.582	ENSMPUG00000011457	CSTF3	100	99.582	Mustela_putorius_furo
ENSOCUG00000015417	CSTF3	100	96.234	ENSMLUG00000026022	-	100	96.234	Myotis_lucifugus
ENSOCUG00000015417	CSTF3	99	99.437	ENSMLUG00000003073	-	99	99.437	Myotis_lucifugus
ENSOCUG00000015417	CSTF3	100	99.163	ENSNGAG00000010677	Cstf3	100	99.163	Nannospalax_galili
ENSOCUG00000015417	CSTF3	87	90.880	ENSNBRG00000007345	cstf3	100	90.880	Neolamprologus_brichardi
ENSOCUG00000015417	CSTF3	100	99.582	ENSNLEG00000017901	CSTF3	100	99.680	Nomascus_leucogenys
ENSOCUG00000015417	CSTF3	73	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSOCUG00000015417	CSTF3	67	98.667	ENSOPRG00000000199	-	67	98.667	Ochotona_princeps
ENSOCUG00000015417	CSTF3	89	86.950	ENSODEG00000006311	-	97	86.950	Octodon_degus
ENSOCUG00000015417	CSTF3	100	99.582	ENSODEG00000016737	-	100	99.582	Octodon_degus
ENSOCUG00000015417	CSTF3	98	91.631	ENSONIG00000005563	cstf3	100	91.086	Oreochromis_niloticus
ENSOCUG00000015417	CSTF3	90	96.769	ENSOANG00000015140	CSTF3	100	96.769	Ornithorhynchus_anatinus
ENSOCUG00000015417	CSTF3	100	90.656	ENSORLG00000009762	cstf3	100	90.656	Oryzias_latipes
ENSOCUG00000015417	CSTF3	100	90.656	ENSORLG00020005540	cstf3	100	90.656	Oryzias_latipes_hni
ENSOCUG00000015417	CSTF3	100	90.516	ENSORLG00015003551	cstf3	100	90.516	Oryzias_latipes_hsok
ENSOCUG00000015417	CSTF3	100	89.819	ENSOMEG00000003848	cstf3	100	89.819	Oryzias_melastigma
ENSOCUG00000015417	CSTF3	100	99.167	ENSOGAG00000010229	CSTF3	100	99.167	Otolemur_garnettii
ENSOCUG00000015417	CSTF3	90	99.533	ENSOARG00000017271	CSTF3	99	99.533	Ovis_aries
ENSOCUG00000015417	CSTF3	99	96.051	ENSPPAG00000027358	CSTF3	99	96.051	Pan_paniscus
ENSOCUG00000015417	CSTF3	100	99.303	ENSPPRG00000016852	CSTF3	100	99.303	Panthera_pardus
ENSOCUG00000015417	CSTF3	100	99.303	ENSPTIG00000008716	CSTF3	100	99.303	Panthera_tigris_altaica
ENSOCUG00000015417	CSTF3	100	99.582	ENSPTRG00000003485	CSTF3	100	99.582	Pan_troglodytes
ENSOCUG00000015417	CSTF3	100	99.582	ENSPANG00000013722	CSTF3	100	99.582	Papio_anubis
ENSOCUG00000015417	CSTF3	100	92.190	ENSPKIG00000023648	cstf3	100	92.190	Paramormyrops_kingsleyae
ENSOCUG00000015417	CSTF3	100	96.936	ENSPSIG00000009173	CSTF3	100	96.936	Pelodiscus_sinensis
ENSOCUG00000015417	CSTF3	76	94.881	ENSPMGG00000000164	cstf3	99	94.881	Periophthalmus_magnuspinnatus
ENSOCUG00000015417	CSTF3	100	99.024	ENSPEMG00000011481	Cstf3	100	99.024	Peromyscus_maniculatus_bairdii
ENSOCUG00000015417	CSTF3	99	80.056	ENSPMAG00000007282	cstf3	99	79.747	Petromyzon_marinus
ENSOCUG00000015417	CSTF3	99	95.769	ENSPCIG00000026406	-	100	97.920	Phascolarctos_cinereus
ENSOCUG00000015417	CSTF3	100	81.058	ENSPCIG00000030419	-	90	81.476	Phascolarctos_cinereus
ENSOCUG00000015417	CSTF3	100	90.529	ENSPFOG00000017239	cstf3	100	90.529	Poecilia_formosa
ENSOCUG00000015417	CSTF3	100	90.529	ENSPLAG00000009456	cstf3	100	90.529	Poecilia_latipinna
ENSOCUG00000015417	CSTF3	100	90.529	ENSPMEG00000010320	cstf3	100	90.529	Poecilia_mexicana
ENSOCUG00000015417	CSTF3	100	90.529	ENSPREG00000013549	cstf3	100	90.529	Poecilia_reticulata
ENSOCUG00000015417	CSTF3	100	99.582	ENSPPYG00000003375	CSTF3	100	99.582	Pongo_abelii
ENSOCUG00000015417	CSTF3	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSOCUG00000015417	CSTF3	100	94.421	ENSPCOG00000014417	CSTF3	100	94.421	Propithecus_coquereli
ENSOCUG00000015417	CSTF3	100	94.142	ENSPVAG00000002350	CSTF3	100	94.142	Pteropus_vampyrus
ENSOCUG00000015417	CSTF3	98	91.631	ENSPNYG00000018259	cstf3	100	91.086	Pundamilia_nyererei
ENSOCUG00000015417	CSTF3	100	91.771	ENSPNAG00000020182	cstf3	100	91.771	Pygocentrus_nattereri
ENSOCUG00000015417	CSTF3	87	98.880	ENSRNOG00000012089	Cstf3	100	98.880	Rattus_norvegicus
ENSOCUG00000015417	CSTF3	99	98.307	ENSRBIG00000044258	CSTF3	100	99.680	Rhinopithecus_bieti
ENSOCUG00000015417	CSTF3	100	99.582	ENSRROG00000043450	CSTF3	100	99.680	Rhinopithecus_roxellana
ENSOCUG00000015417	CSTF3	100	99.582	ENSSBOG00000024764	CSTF3	100	99.680	Saimiri_boliviensis_boliviensis
ENSOCUG00000015417	CSTF3	100	85.077	ENSSHAG00000003135	-	99	85.077	Sarcophilus_harrisii
ENSOCUG00000015417	CSTF3	100	97.490	ENSSHAG00000018128	-	100	97.490	Sarcophilus_harrisii
ENSOCUG00000015417	CSTF3	100	91.911	ENSSFOG00015022133	cstf3	100	91.911	Scleropages_formosus
ENSOCUG00000015417	CSTF3	100	89.972	ENSSMAG00000002197	cstf3	100	89.972	Scophthalmus_maximus
ENSOCUG00000015417	CSTF3	100	90.808	ENSSDUG00000020426	cstf3	100	90.808	Seriola_dumerili
ENSOCUG00000015417	CSTF3	100	90.947	ENSSLDG00000025649	cstf3	100	90.947	Seriola_lalandi_dorsalis
ENSOCUG00000015417	CSTF3	100	99.442	ENSSARG00000000391	CSTF3	100	99.442	Sorex_araneus
ENSOCUG00000015417	CSTF3	96	97.106	ENSSPUG00000010546	CSTF3	100	97.106	Sphenodon_punctatus
ENSOCUG00000015417	CSTF3	100	90.947	ENSSPAG00000004958	cstf3	100	90.947	Stegastes_partitus
ENSOCUG00000015417	CSTF3	99	99.022	ENSSSCG00000040954	CSTF3	100	99.022	Sus_scrofa
ENSOCUG00000015417	CSTF3	99	97.740	ENSTGUG00000005010	CSTF3	100	97.740	Taeniopygia_guttata
ENSOCUG00000015417	CSTF3	100	89.833	ENSTRUG00000004959	cstf3	100	89.833	Takifugu_rubripes
ENSOCUG00000015417	CSTF3	99	90.563	ENSTNIG00000013811	cstf3	99	90.563	Tetraodon_nigroviridis
ENSOCUG00000015417	CSTF3	90	96.106	ENSTBEG00000001544	CSTF3	90	96.106	Tupaia_belangeri
ENSOCUG00000015417	CSTF3	100	96.792	ENSTTRG00000016366	CSTF3	100	96.792	Tursiops_truncatus
ENSOCUG00000015417	CSTF3	99	99.718	ENSUMAG00000018971	CSTF3	100	99.680	Ursus_maritimus
ENSOCUG00000015417	CSTF3	100	99.442	ENSVPAG00000007800	CSTF3	100	99.442	Vicugna_pacos
ENSOCUG00000015417	CSTF3	99	99.718	ENSVVUG00000014938	CSTF3	100	99.680	Vulpes_vulpes
ENSOCUG00000015417	CSTF3	88	79.375	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSOCUG00000015417	CSTF3	66	43.595	ENSXETG00000017946	-	99	43.595	Xenopus_tropicalis
ENSOCUG00000015417	CSTF3	87	90.240	ENSXCOG00000011741	cstf3	100	90.240	Xiphophorus_couchianus
ENSOCUG00000015417	CSTF3	100	90.529	ENSXMAG00000009545	cstf3	100	90.529	Xiphophorus_maculatus