EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000015484 (Gene tree)
Gene ID: 100345067
Gene Symbol: CRNKL1
Alias: -
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 21639 bases
Position: chr4:16495616-16517254
Accession: 100345067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000013311	HAT	PF02184.16	2.8e-40	1	2
ENSOCUP00000013311	HAT	PF02184.16	2.8e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000015493	CRNKL1-201	2493	XM_008256342	ENSOCUP00000013311	830 (aa)	XP_008254564	G1T9K0

Gene Model

Click here to download ENSOCUG00000015484's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000015484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000015484	CRNKL1	99	86.962	ENSG00000101343	CRNKL1	99	96.356	Homo_sapiens
ENSOCUG00000015484	CRNKL1	82	86.364	ENSAPOG00000009705	crnkl1	97	85.119	Acanthochromis_polyacanthus
ENSOCUG00000015484	CRNKL1	98	87.995	ENSAMEG00000000270	CRNKL1	99	87.380	Ailuropoda_melanoleuca
ENSOCUG00000015484	CRNKL1	81	86.095	ENSACIG00000015267	crnkl1	89	85.395	Amphilophus_citrinellus
ENSOCUG00000015484	CRNKL1	82	86.657	ENSAOCG00000021964	crnkl1	89	85.968	Amphiprion_ocellaris
ENSOCUG00000015484	CRNKL1	82	86.510	ENSAPEG00000015041	crnkl1	90	85.820	Amphiprion_percula
ENSOCUG00000015484	CRNKL1	82	85.924	ENSATEG00000001068	crnkl1	89	85.229	Anabas_testudineus
ENSOCUG00000015484	CRNKL1	81	92.262	ENSAPLG00000013105	CRNKL1	97	92.319	Anas_platyrhynchos
ENSOCUG00000015484	CRNKL1	83	92.722	ENSACAG00000005284	CRNKL1	99	92.082	Anolis_carolinensis
ENSOCUG00000015484	CRNKL1	76	96.845	ENSANAG00000024889	CRNKL1	100	96.845	Aotus_nancymaae
ENSOCUG00000015484	CRNKL1	83	86.861	ENSACLG00000010813	crnkl1	89	86.647	Astatotilapia_calliptera
ENSOCUG00000015484	CRNKL1	80	87.688	ENSAMXG00000018334	crnkl1	92	85.463	Astyanax_mexicanus
ENSOCUG00000015484	CRNKL1	83	97.674	ENSBTAG00000008472	CRNKL1	99	97.674	Bos_taurus
ENSOCUG00000015484	CRNKL1	77	62.053	WBGene00019762	M03F8.3	89	60.928	Caenorhabditis_elegans
ENSOCUG00000015484	CRNKL1	83	96.210	ENSCJAG00000005393	CRNKL1	99	96.210	Callithrix_jacchus
ENSOCUG00000015484	CRNKL1	92	89.189	ENSCAFG00000005333	CRNKL1	95	97.832	Canis_familiaris
ENSOCUG00000015484	CRNKL1	83	98.105	ENSCAFG00020027488	CRNKL1	99	98.105	Canis_lupus_dingo
ENSOCUG00000015484	CRNKL1	83	96.076	ENSCHIG00000013171	CRNKL1	99	96.076	Capra_hircus
ENSOCUG00000015484	CRNKL1	83	96.939	ENSTSYG00000004197	CRNKL1	99	96.939	Carlito_syrichta
ENSOCUG00000015484	CRNKL1	79	96.753	ENSCAPG00000010501	CRNKL1	99	96.753	Cavia_aperea
ENSOCUG00000015484	CRNKL1	83	96.647	ENSCPOG00000004418	CRNKL1	99	96.647	Cavia_porcellus
ENSOCUG00000015484	CRNKL1	83	96.210	ENSCCAG00000027037	CRNKL1	99	96.210	Cebus_capucinus
ENSOCUG00000015484	CRNKL1	99	85.850	ENSCATG00000034247	CRNKL1	99	96.356	Cercocebus_atys
ENSOCUG00000015484	CRNKL1	83	96.939	ENSCLAG00000013859	CRNKL1	99	96.939	Chinchilla_lanigera
ENSOCUG00000015484	CRNKL1	83	96.356	ENSCSAG00000011434	CRNKL1	99	96.356	Chlorocebus_sabaeus
ENSOCUG00000015484	CRNKL1	99	86.178	ENSCHOG00000006371	CRNKL1	99	85.697	Choloepus_hoffmanni
ENSOCUG00000015484	CRNKL1	82	94.006	ENSCPBG00000023501	CRNKL1	99	93.373	Chrysemys_picta_bellii
ENSOCUG00000015484	CRNKL1	80	69.277	ENSCING00000002709	-	96	68.079	Ciona_intestinalis
ENSOCUG00000015484	CRNKL1	99	86.074	ENSCANG00000038789	CRNKL1	99	96.356	Colobus_angolensis_palliatus
ENSOCUG00000015484	CRNKL1	83	98.251	ENSCGRG00001001115	-	99	98.251	Cricetulus_griseus_chok1gshd
ENSOCUG00000015484	CRNKL1	83	98.251	ENSCGRG00001000687	-	99	98.251	Cricetulus_griseus_chok1gshd
ENSOCUG00000015484	CRNKL1	83	98.251	ENSCGRG00000007854	Crnkl1	99	98.251	Cricetulus_griseus_crigri
ENSOCUG00000015484	CRNKL1	82	85.234	ENSCSEG00000005594	crnkl1	86	84.536	Cynoglossus_semilaevis
ENSOCUG00000015484	CRNKL1	80	87.126	ENSCVAG00000015172	crnkl1	90	85.417	Cyprinodon_variegatus
ENSOCUG00000015484	CRNKL1	80	86.596	ENSDARG00000007901	crnkl1	90	84.728	Danio_rerio
ENSOCUG00000015484	CRNKL1	83	97.962	ENSDNOG00000016226	CRNKL1	95	97.962	Dasypus_novemcinctus
ENSOCUG00000015484	CRNKL1	81	87.798	ENSDORG00000030174	-	95	88.372	Dipodomys_ordii
ENSOCUG00000015484	CRNKL1	81	88.393	ENSDORG00000023724	-	95	89.302	Dipodomys_ordii
ENSOCUG00000015484	CRNKL1	83	96.387	ENSDORG00000000394	-	99	96.387	Dipodomys_ordii
ENSOCUG00000015484	CRNKL1	80	69.012	FBgn0000377	crn	93	68.817	Drosophila_melanogaster
ENSOCUG00000015484	CRNKL1	99	74.316	ENSETEG00000003711	CRNKL1	99	74.224	Echinops_telfairi
ENSOCUG00000015484	CRNKL1	82	60.956	ENSEBUG00000013461	crnkl1	93	57.553	Eptatretus_burgeri
ENSOCUG00000015484	CRNKL1	83	98.397	ENSEASG00005002072	CRNKL1	99	98.397	Equus_asinus_asinus
ENSOCUG00000015484	CRNKL1	83	98.397	ENSECAG00000022215	CRNKL1	99	98.397	Equus_caballus
ENSOCUG00000015484	CRNKL1	89	89.812	ENSEEUG00000000413	CRNKL1	99	90.054	Erinaceus_europaeus
ENSOCUG00000015484	CRNKL1	81	85.821	ENSELUG00000015424	crnkl1	96	83.748	Esox_lucius
ENSOCUG00000015484	CRNKL1	83	98.251	ENSFCAG00000000714	CRNKL1	99	98.251	Felis_catus
ENSOCUG00000015484	CRNKL1	80	91.779	ENSFALG00000004611	CRNKL1	98	91.831	Ficedula_albicollis
ENSOCUG00000015484	CRNKL1	83	97.376	ENSFDAG00000000604	CRNKL1	99	97.376	Fukomys_damarensis
ENSOCUG00000015484	CRNKL1	83	85.277	ENSFHEG00000013163	crnkl1	87	84.581	Fundulus_heteroclitus
ENSOCUG00000015484	CRNKL1	81	85.672	ENSGMOG00000007609	crnkl1	95	82.828	Gadus_morhua
ENSOCUG00000015484	CRNKL1	82	93.129	ENSGALG00000008429	CRNKL1	99	92.489	Gallus_gallus
ENSOCUG00000015484	CRNKL1	82	85.735	ENSGAFG00000014249	crnkl1	88	84.970	Gambusia_affinis
ENSOCUG00000015484	CRNKL1	83	83.550	ENSGACG00000011852	crnkl1	91	82.849	Gasterosteus_aculeatus
ENSOCUG00000015484	CRNKL1	79	92.956	ENSGAGG00000021233	CRNKL1	99	93.226	Gopherus_agassizii
ENSOCUG00000015484	CRNKL1	99	85.412	ENSGGOG00000014176	CRNKL1	99	96.356	Gorilla_gorilla
ENSOCUG00000015484	CRNKL1	82	87.187	ENSHBUG00000005246	crnkl1	89	86.499	Haplochromis_burtoni
ENSOCUG00000015484	CRNKL1	83	97.230	ENSHGLG00000010856	CRNKL1	99	97.230	Heterocephalus_glaber_female
ENSOCUG00000015484	CRNKL1	83	97.230	ENSHGLG00100011521	CRNKL1	99	97.230	Heterocephalus_glaber_male
ENSOCUG00000015484	CRNKL1	81	84.155	ENSHCOG00000006420	crnkl1	98	81.818	Hippocampus_comes
ENSOCUG00000015484	CRNKL1	78	88.136	ENSIPUG00000006751	crnkl1	92	86.165	Ictalurus_punctatus
ENSOCUG00000015484	CRNKL1	80	76.012	ENSIPUG00000006836	-	96	75.647	Ictalurus_punctatus
ENSOCUG00000015484	CRNKL1	77	69.014	ENSIPUG00000000315	-	99	69.731	Ictalurus_punctatus
ENSOCUG00000015484	CRNKL1	83	98.397	ENSSTOG00000014747	CRNKL1	99	98.397	Ictidomys_tridecemlineatus
ENSOCUG00000015484	CRNKL1	83	96.011	ENSJJAG00000016926	Crnkl1	99	96.011	Jaculus_jaculus
ENSOCUG00000015484	CRNKL1	83	85.839	ENSKMAG00000003620	crnkl1	86	85.147	Kryptolebias_marmoratus
ENSOCUG00000015484	CRNKL1	80	70.222	ENSLBEG00000003543	crnkl1	91	69.941	Labrus_bergylta
ENSOCUG00000015484	CRNKL1	82	87.573	ENSLACG00000001129	CRNKL1	99	86.892	Latimeria_chalumnae
ENSOCUG00000015484	CRNKL1	80	88.739	ENSLOCG00000016889	crnkl1	95	86.257	Lepisosteus_oculatus
ENSOCUG00000015484	CRNKL1	83	97.668	ENSLAFG00000004512	CRNKL1	99	97.668	Loxodonta_africana
ENSOCUG00000015484	CRNKL1	99	84.977	ENSMFAG00000039893	CRNKL1	99	96.356	Macaca_fascicularis
ENSOCUG00000015484	CRNKL1	99	85.409	ENSMMUG00000007709	CRNKL1	99	96.356	Macaca_mulatta
ENSOCUG00000015484	CRNKL1	99	84.624	ENSMNEG00000037490	CRNKL1	99	96.356	Macaca_nemestrina
ENSOCUG00000015484	CRNKL1	99	85.308	ENSMLEG00000034885	CRNKL1	99	96.356	Mandrillus_leucophaeus
ENSOCUG00000015484	CRNKL1	82	86.303	ENSMAMG00000008757	crnkl1	89	85.608	Mastacembelus_armatus
ENSOCUG00000015484	CRNKL1	82	87.334	ENSMZEG00005022345	crnkl1	89	86.647	Maylandia_zebra
ENSOCUG00000015484	CRNKL1	83	92.151	ENSMGAG00000003452	CRNKL1	93	91.765	Meleagris_gallopavo
ENSOCUG00000015484	CRNKL1	83	98.105	ENSMAUG00000020764	Crnkl1	99	98.105	Mesocricetus_auratus
ENSOCUG00000015484	CRNKL1	83	97.230	ENSMICG00000006048	CRNKL1	99	97.230	Microcebus_murinus
ENSOCUG00000015484	CRNKL1	80	69.760	ENSMOCG00000004179	-	92	70.000	Microtus_ochrogaster
ENSOCUG00000015484	CRNKL1	83	90.115	ENSMOCG00000000681	-	99	90.115	Microtus_ochrogaster
ENSOCUG00000015484	CRNKL1	76	85.466	ENSMMOG00000017601	crnkl1	96	84.713	Mola_mola
ENSOCUG00000015484	CRNKL1	83	86.735	ENSMODG00000010857	-	96	87.273	Monodelphis_domestica
ENSOCUG00000015484	CRNKL1	83	92.154	ENSMODG00000005961	-	98	92.006	Monodelphis_domestica
ENSOCUG00000015484	CRNKL1	81	63.757	ENSMALG00000011211	crnkl1	87	68.405	Monopterus_albus
ENSOCUG00000015484	CRNKL1	83	98.251	MGP_CAROLIEiJ_G0024394	Crnkl1	99	98.251	Mus_caroli
ENSOCUG00000015484	CRNKL1	83	98.397	ENSMUSG00000001767	Crnkl1	99	98.397	Mus_musculus
ENSOCUG00000015484	CRNKL1	83	96.647	MGP_PahariEiJ_G0025838	Crnkl1	99	96.647	Mus_pahari
ENSOCUG00000015484	CRNKL1	83	98.542	MGP_SPRETEiJ_G0025312	Crnkl1	99	98.542	Mus_spretus
ENSOCUG00000015484	CRNKL1	83	98.105	ENSMPUG00000001226	CRNKL1	99	98.105	Mustela_putorius_furo
ENSOCUG00000015484	CRNKL1	93	90.347	ENSMLUG00000016513	CRNKL1	99	90.347	Myotis_lucifugus
ENSOCUG00000015484	CRNKL1	83	95.994	ENSNGAG00000023097	Crnkl1	99	95.994	Nannospalax_galili
ENSOCUG00000015484	CRNKL1	82	87.482	ENSNBRG00000007867	crnkl1	89	86.795	Neolamprologus_brichardi
ENSOCUG00000015484	CRNKL1	83	93.003	ENSNLEG00000009862	CRNKL1	99	92.342	Nomascus_leucogenys
ENSOCUG00000015484	CRNKL1	83	86.192	ENSMEUG00000002361	-	98	85.735	Notamacropus_eugenii
ENSOCUG00000015484	CRNKL1	80	96.252	ENSMEUG00000012167	-	99	96.212	Notamacropus_eugenii
ENSOCUG00000015484	CRNKL1	90	68.726	ENSOPRG00000009242	-	81	68.726	Ochotona_princeps
ENSOCUG00000015484	CRNKL1	83	96.793	ENSODEG00000012175	CRNKL1	99	96.793	Octodon_degus
ENSOCUG00000015484	CRNKL1	82	87.776	ENSONIG00000018728	crnkl1	89	87.092	Oreochromis_niloticus
ENSOCUG00000015484	CRNKL1	80	85.180	ENSORLG00000017240	crnkl1	93	80.746	Oryzias_latipes
ENSOCUG00000015484	CRNKL1	80	85.329	ENSORLG00020001742	crnkl1	89	84.615	Oryzias_latipes_hni
ENSOCUG00000015484	CRNKL1	80	85.329	ENSORLG00015019564	crnkl1	88	84.615	Oryzias_latipes_hsok
ENSOCUG00000015484	CRNKL1	82	84.503	ENSOMEG00000019895	crnkl1	90	83.800	Oryzias_melastigma
ENSOCUG00000015484	CRNKL1	83	96.939	ENSOGAG00000011544	CRNKL1	99	96.939	Otolemur_garnettii
ENSOCUG00000015484	CRNKL1	92	91.310	ENSOARG00000002150	CRNKL1	99	90.272	Ovis_aries
ENSOCUG00000015484	CRNKL1	99	86.005	ENSPPAG00000027847	CRNKL1	99	85.407	Pan_paniscus
ENSOCUG00000015484	CRNKL1	83	98.251	ENSPPRG00000001955	CRNKL1	99	98.251	Panthera_pardus
ENSOCUG00000015484	CRNKL1	99	83.157	ENSPTIG00000007393	CRNKL1	99	98.251	Panthera_tigris_altaica
ENSOCUG00000015484	CRNKL1	83	96.356	ENSPTRG00000030609	CRNKL1	99	96.356	Pan_troglodytes
ENSOCUG00000015484	CRNKL1	99	83.492	ENSPANG00000017420	CRNKL1	99	96.356	Papio_anubis
ENSOCUG00000015484	CRNKL1	80	82.609	ENSPKIG00000017093	crnkl1	88	81.149	Paramormyrops_kingsleyae
ENSOCUG00000015484	CRNKL1	82	92.815	ENSPSIG00000012705	CRNKL1	96	94.091	Pelodiscus_sinensis
ENSOCUG00000015484	CRNKL1	83	78.955	ENSPMGG00000006263	crnkl1	95	78.287	Periophthalmus_magnuspinnatus
ENSOCUG00000015484	CRNKL1	83	98.542	ENSPEMG00000000073	-	99	98.542	Peromyscus_maniculatus_bairdii
ENSOCUG00000015484	CRNKL1	82	81.686	ENSPMAG00000002250	crnkl1	98	80.966	Petromyzon_marinus
ENSOCUG00000015484	CRNKL1	87	92.138	ENSPCIG00000025825	CRNKL1	99	91.586	Phascolarctos_cinereus
ENSOCUG00000015484	CRNKL1	80	86.527	ENSPFOG00000005102	crnkl1	92	84.041	Poecilia_formosa
ENSOCUG00000015484	CRNKL1	82	85.588	ENSPLAG00000007288	crnkl1	89	83.918	Poecilia_latipinna
ENSOCUG00000015484	CRNKL1	80	86.677	ENSPMEG00000008865	crnkl1	92	84.164	Poecilia_mexicana
ENSOCUG00000015484	CRNKL1	80	86.228	ENSPREG00000012615	crnkl1	91	83.824	Poecilia_reticulata
ENSOCUG00000015484	CRNKL1	99	86.305	ENSPPYG00000010747	CRNKL1	99	85.832	Pongo_abelii
ENSOCUG00000015484	CRNKL1	99	81.995	ENSPCAG00000003296	CRNKL1	99	80.900	Procavia_capensis
ENSOCUG00000015484	CRNKL1	99	84.561	ENSPCOG00000017608	CRNKL1	99	83.886	Propithecus_coquereli
ENSOCUG00000015484	CRNKL1	99	87.232	ENSPVAG00000006207	CRNKL1	99	86.754	Pteropus_vampyrus
ENSOCUG00000015484	CRNKL1	82	87.187	ENSPNYG00000001977	crnkl1	89	86.499	Pundamilia_nyererei
ENSOCUG00000015484	CRNKL1	81	88.542	ENSPNAG00000001507	crnkl1	96	83.776	Pygocentrus_nattereri
ENSOCUG00000015484	CRNKL1	83	97.959	ENSRNOG00000040045	Crnkl1	99	97.959	Rattus_norvegicus
ENSOCUG00000015484	CRNKL1	83	98.397	ENSRNOG00000010587	Crnkl1	99	98.397	Rattus_norvegicus
ENSOCUG00000015484	CRNKL1	83	96.210	ENSRBIG00000031770	CRNKL1	99	96.210	Rhinopithecus_bieti
ENSOCUG00000015484	CRNKL1	83	96.064	ENSRROG00000040450	CRNKL1	99	95.434	Rhinopithecus_roxellana
ENSOCUG00000015484	CRNKL1	78	37.536	YLR117C	CLF1	98	37.645	Saccharomyces_cerevisiae
ENSOCUG00000015484	CRNKL1	99	84.383	ENSSBOG00000029672	CRNKL1	99	96.356	Saimiri_boliviensis_boliviensis
ENSOCUG00000015484	CRNKL1	78	75.422	ENSSHAG00000011199	CRNKL1	98	75.580	Sarcophilus_harrisii
ENSOCUG00000015484	CRNKL1	80	87.500	ENSSFOG00015000946	crnkl1	88	85.294	Scleropages_formosus
ENSOCUG00000015484	CRNKL1	83	84.593	ENSSMAG00000007933	crnkl1	88	83.895	Scophthalmus_maximus
ENSOCUG00000015484	CRNKL1	82	79.883	ENSSDUG00000012625	crnkl1	86	79.142	Seriola_dumerili
ENSOCUG00000015484	CRNKL1	82	86.471	ENSSLDG00000021413	crnkl1	87	85.778	Seriola_lalandi_dorsalis
ENSOCUG00000015484	CRNKL1	99	85.185	ENSSARG00000006443	CRNKL1	99	84.505	Sorex_araneus
ENSOCUG00000015484	CRNKL1	83	92.868	ENSSPUG00000005254	CRNKL1	99	92.229	Sphenodon_punctatus
ENSOCUG00000015484	CRNKL1	80	87.575	ENSSPAG00000016150	crnkl1	85	86.878	Stegastes_partitus
ENSOCUG00000015484	CRNKL1	83	97.959	ENSSSCG00000038587	CRNKL1	99	97.959	Sus_scrofa
ENSOCUG00000015484	CRNKL1	82	91.971	ENSTGUG00000007645	CRNKL1	99	90.129	Taeniopygia_guttata
ENSOCUG00000015484	CRNKL1	81	80.804	ENSTRUG00000015417	crnkl1	89	79.438	Takifugu_rubripes
ENSOCUG00000015484	CRNKL1	80	85.202	ENSTNIG00000010710	crnkl1	98	82.991	Tetraodon_nigroviridis
ENSOCUG00000015484	CRNKL1	92	84.516	ENSTBEG00000001304	CRNKL1	99	84.387	Tupaia_belangeri
ENSOCUG00000015484	CRNKL1	93	80.779	ENSTTRG00000000484	CRNKL1	99	80.276	Tursiops_truncatus
ENSOCUG00000015484	CRNKL1	83	98.251	ENSUAMG00000018586	CRNKL1	99	98.251	Ursus_americanus
ENSOCUG00000015484	CRNKL1	83	98.251	ENSUMAG00000024957	CRNKL1	99	98.251	Ursus_maritimus
ENSOCUG00000015484	CRNKL1	83	97.832	ENSVVUG00000012559	CRNKL1	83	97.832	Vulpes_vulpes
ENSOCUG00000015484	CRNKL1	82	90.525	ENSXETG00000009698	crnkl1	99	89.868	Xenopus_tropicalis
ENSOCUG00000015484	CRNKL1	80	85.800	ENSXCOG00000000824	crnkl1	91	83.407	Xiphophorus_couchianus
ENSOCUG00000015484	CRNKL1	80	86.677	ENSXMAG00000006896	crnkl1	91	84.265	Xiphophorus_maculatus