EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000015905 (Gene tree)
Gene ID: 100337718
Gene Symbol: GPATCH1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 51341 bases
Position: chr5:3007497-3058837
Accession: 100337718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000013676	DUF1604	PF07713.13	1.2e-36	1	1
ENSOCUP00000013676	G-patch	PF01585.23	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000015917	GPATCH1-201	2816	XM_002711517	ENSOCUP00000013676	931 (aa)	XP_002711563	G1TAI3

Gene Model

Click here to download ENSOCUG00000015905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000015905's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000015905	GPATCH1	100	87.460	ENSG00000076650	GPATCH1	100	87.460	Homo_sapiens
ENSOCUG00000015905	GPATCH1	100	87.983	ENSAMEG00000015575	GPATCH1	100	87.983	Ailuropoda_melanoleuca
ENSOCUG00000015905	GPATCH1	81	70.787	ENSAOCG00000006668	gpatch1	75	70.787	Amphiprion_ocellaris
ENSOCUG00000015905	GPATCH1	81	54.802	ENSAPEG00000000026	gpatch1	90	51.606	Amphiprion_percula
ENSOCUG00000015905	GPATCH1	81	52.592	ENSATEG00000014494	gpatch1	90	50.626	Anabas_testudineus
ENSOCUG00000015905	GPATCH1	90	59.978	ENSAPLG00000007584	GPATCH1	96	61.290	Anas_platyrhynchos
ENSOCUG00000015905	GPATCH1	100	87.567	ENSANAG00000027002	GPATCH1	100	87.567	Aotus_nancymaae
ENSOCUG00000015905	GPATCH1	81	54.719	ENSACLG00000024740	gpatch1	79	54.847	Astatotilapia_calliptera
ENSOCUG00000015905	GPATCH1	91	53.125	ENSAMXG00000020177	gpatch1	97	53.175	Astyanax_mexicanus
ENSOCUG00000015905	GPATCH1	91	87.750	ENSBTAG00000000721	GPATCH1	100	83.047	Bos_taurus
ENSOCUG00000015905	GPATCH1	100	87.353	ENSCJAG00000000684	GPATCH1	100	87.353	Callithrix_jacchus
ENSOCUG00000015905	GPATCH1	100	88.532	ENSCAFG00000007457	GPATCH1	84	88.532	Canis_familiaris
ENSOCUG00000015905	GPATCH1	94	88.673	ENSCAFG00020019731	GPATCH1	91	88.837	Canis_lupus_dingo
ENSOCUG00000015905	GPATCH1	99	87.324	ENSCHIG00000019626	GPATCH1	100	83.798	Capra_hircus
ENSOCUG00000015905	GPATCH1	97	78.965	ENSCAPG00000008827	GPATCH1	100	78.775	Cavia_aperea
ENSOCUG00000015905	GPATCH1	100	82.227	ENSCPOG00000024477	GPATCH1	100	82.479	Cavia_porcellus
ENSOCUG00000015905	GPATCH1	100	87.031	ENSCCAG00000024676	GPATCH1	100	87.031	Cebus_capucinus
ENSOCUG00000015905	GPATCH1	100	87.674	ENSCATG00000043637	GPATCH1	100	87.674	Cercocebus_atys
ENSOCUG00000015905	GPATCH1	96	82.063	ENSCLAG00000003395	-	100	82.793	Chinchilla_lanigera
ENSOCUG00000015905	GPATCH1	100	85.332	ENSCSAG00000004743	GPATCH1	100	85.332	Chlorocebus_sabaeus
ENSOCUG00000015905	GPATCH1	92	75.810	ENSCHOG00000012865	GPATCH1	100	75.810	Choloepus_hoffmanni
ENSOCUG00000015905	GPATCH1	78	69.904	ENSCPBG00000000666	GPATCH1	92	69.904	Chrysemys_picta_bellii
ENSOCUG00000015905	GPATCH1	81	34.935	ENSCING00000012518	-	90	34.393	Ciona_intestinalis
ENSOCUG00000015905	GPATCH1	90	83.744	ENSCANG00000012540	GPATCH1	100	83.744	Colobus_angolensis_palliatus
ENSOCUG00000015905	GPATCH1	97	83.736	ENSCGRG00001016736	Gpatch1	100	82.462	Cricetulus_griseus_chok1gshd
ENSOCUG00000015905	GPATCH1	89	68.868	ENSCGRG00000005069	Gpatch1	91	68.986	Cricetulus_griseus_crigri
ENSOCUG00000015905	GPATCH1	81	49.791	ENSCSEG00000019456	-	82	64.151	Cynoglossus_semilaevis
ENSOCUG00000015905	GPATCH1	90	52.106	ENSDARG00000033418	gpatch1	91	52.567	Danio_rerio
ENSOCUG00000015905	GPATCH1	91	86.134	ENSDNOG00000005291	GPATCH1	95	86.134	Dasypus_novemcinctus
ENSOCUG00000015905	GPATCH1	94	79.091	ENSDORG00000012546	Gpatch1	95	79.436	Dipodomys_ordii
ENSOCUG00000015905	GPATCH1	99	76.381	ENSETEG00000003626	GPATCH1	92	76.616	Echinops_telfairi
ENSOCUG00000015905	GPATCH1	94	37.609	ENSEBUG00000011286	gpatch1	91	38.470	Eptatretus_burgeri
ENSOCUG00000015905	GPATCH1	91	86.761	ENSEASG00005021162	GPATCH1	93	87.905	Equus_asinus_asinus
ENSOCUG00000015905	GPATCH1	94	87.629	ENSECAG00000022743	GPATCH1	88	87.647	Equus_caballus
ENSOCUG00000015905	GPATCH1	77	79.412	ENSEEUG00000012925	GPATCH1	77	79.412	Erinaceus_europaeus
ENSOCUG00000015905	GPATCH1	99	50.000	ENSELUG00000018195	gpatch1	90	52.213	Esox_lucius
ENSOCUG00000015905	GPATCH1	100	87.017	ENSFCAG00000014917	GPATCH1	100	87.017	Felis_catus
ENSOCUG00000015905	GPATCH1	99	63.280	ENSFALG00000007821	GPATCH1	89	62.985	Ficedula_albicollis
ENSOCUG00000015905	GPATCH1	96	82.832	ENSFDAG00000003871	GPATCH1	100	82.759	Fukomys_damarensis
ENSOCUG00000015905	GPATCH1	89	52.425	ENSGMOG00000003830	gpatch1	95	52.425	Gadus_morhua
ENSOCUG00000015905	GPATCH1	92	63.387	ENSGALG00000004839	GPATCH1	93	64.489	Gallus_gallus
ENSOCUG00000015905	GPATCH1	90	50.235	ENSGACG00000017544	gpatch1	93	50.587	Gasterosteus_aculeatus
ENSOCUG00000015905	GPATCH1	99	65.203	ENSGAGG00000010067	GPATCH1	100	64.651	Gopherus_agassizii
ENSOCUG00000015905	GPATCH1	98	86.914	ENSGGOG00000010862	GPATCH1	100	87.555	Gorilla_gorilla
ENSOCUG00000015905	GPATCH1	81	54.872	ENSHBUG00000023462	gpatch1	90	52.608	Haplochromis_burtoni
ENSOCUG00000015905	GPATCH1	100	83.708	ENSHGLG00000009334	GPATCH1	100	83.529	Heterocephalus_glaber_female
ENSOCUG00000015905	GPATCH1	100	83.816	ENSHGLG00100018074	GPATCH1	100	83.636	Heterocephalus_glaber_male
ENSOCUG00000015905	GPATCH1	92	52.695	ENSIPUG00000014977	gpatch1	89	53.356	Ictalurus_punctatus
ENSOCUG00000015905	GPATCH1	100	86.174	ENSSTOG00000003720	GPATCH1	100	85.745	Ictidomys_tridecemlineatus
ENSOCUG00000015905	GPATCH1	91	84.688	ENSJJAG00000023765	Gpatch1	100	80.236	Jaculus_jaculus
ENSOCUG00000015905	GPATCH1	89	51.632	ENSKMAG00000017950	gpatch1	89	52.503	Kryptolebias_marmoratus
ENSOCUG00000015905	GPATCH1	89	50.963	ENSLBEG00000026527	gpatch1	88	52.262	Labrus_bergylta
ENSOCUG00000015905	GPATCH1	88	59.443	ENSLACG00000008130	GPATCH1	90	58.363	Latimeria_chalumnae
ENSOCUG00000015905	GPATCH1	99	55.638	ENSLOCG00000001800	gpatch1	90	56.395	Lepisosteus_oculatus
ENSOCUG00000015905	GPATCH1	99	87.051	ENSLAFG00000013589	GPATCH1	100	86.803	Loxodonta_africana
ENSOCUG00000015905	GPATCH1	90	87.886	ENSMFAG00000034418	GPATCH1	95	87.886	Macaca_fascicularis
ENSOCUG00000015905	GPATCH1	100	87.473	ENSMMUG00000011790	GPATCH1	100	87.473	Macaca_mulatta
ENSOCUG00000015905	GPATCH1	100	87.031	ENSMNEG00000045084	GPATCH1	100	87.031	Macaca_nemestrina
ENSOCUG00000015905	GPATCH1	100	76.849	ENSMLEG00000043840	GPATCH1	100	76.849	Mandrillus_leucophaeus
ENSOCUG00000015905	GPATCH1	81	54.592	ENSMZEG00005001926	gpatch1	79	54.719	Maylandia_zebra
ENSOCUG00000015905	GPATCH1	90	64.024	ENSMGAG00000005775	GPATCH1	89	64.706	Meleagris_gallopavo
ENSOCUG00000015905	GPATCH1	90	79.481	ENSMICG00000004829	GPATCH1	93	79.363	Microcebus_murinus
ENSOCUG00000015905	GPATCH1	99	82.454	ENSMOCG00000000174	Gpatch1	92	83.488	Microtus_ochrogaster
ENSOCUG00000015905	GPATCH1	92	48.832	ENSMMOG00000002140	gpatch1	97	48.549	Mola_mola
ENSOCUG00000015905	GPATCH1	91	74.562	ENSMODG00000012226	GPATCH1	90	74.562	Monodelphis_domestica
ENSOCUG00000015905	GPATCH1	99	50.314	ENSMALG00000014386	gpatch1	92	51.860	Monopterus_albus
ENSOCUG00000015905	GPATCH1	100	85.944	ENSMUSG00000063808	Gpatch1	100	93.878	Mus_musculus
ENSOCUG00000015905	GPATCH1	100	85.332	MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	Mus_pahari
ENSOCUG00000015905	GPATCH1	100	85.638	MGP_SPRETEiJ_G0030681	Gpatch1	100	94.898	Mus_spretus
ENSOCUG00000015905	GPATCH1	100	87.339	ENSMPUG00000007658	GPATCH1	100	87.339	Mustela_putorius_furo
ENSOCUG00000015905	GPATCH1	100	86.588	ENSMLUG00000012161	GPATCH1	100	86.159	Myotis_lucifugus
ENSOCUG00000015905	GPATCH1	100	83.262	ENSNGAG00000012455	Gpatch1	100	83.476	Nannospalax_galili
ENSOCUG00000015905	GPATCH1	100	87.353	ENSNLEG00000007659	GPATCH1	100	87.353	Nomascus_leucogenys
ENSOCUG00000015905	GPATCH1	78	67.818	ENSMEUG00000015174	GPATCH1	77	67.818	Notamacropus_eugenii
ENSOCUG00000015905	GPATCH1	99	81.779	ENSODEG00000007103	GPATCH1	99	81.672	Octodon_degus
ENSOCUG00000015905	GPATCH1	82	54.930	ENSONIG00000003302	gpatch1	91	54.302	Oreochromis_niloticus
ENSOCUG00000015905	GPATCH1	99	71.935	ENSOANG00000012732	GPATCH1	99	71.075	Ornithorhynchus_anatinus
ENSOCUG00000015905	GPATCH1	90	51.222	ENSORLG00000018706	gpatch1	88	51.166	Oryzias_latipes
ENSOCUG00000015905	GPATCH1	90	50.762	ENSOMEG00000022688	gpatch1	90	51.688	Oryzias_melastigma
ENSOCUG00000015905	GPATCH1	84	88.960	ENSOGAG00000004016	GPATCH1	96	89.065	Otolemur_garnettii
ENSOCUG00000015905	GPATCH1	90	87.530	ENSOARG00000004365	GPATCH1	99	83.135	Ovis_aries
ENSOCUG00000015905	GPATCH1	100	87.138	ENSPPAG00000020990	GPATCH1	100	87.138	Pan_paniscus
ENSOCUG00000015905	GPATCH1	100	87.232	ENSPPRG00000017245	GPATCH1	100	87.232	Panthera_pardus
ENSOCUG00000015905	GPATCH1	100	87.876	ENSPTIG00000019649	GPATCH1	100	87.876	Panthera_tigris_altaica
ENSOCUG00000015905	GPATCH1	100	87.245	ENSPTRG00000010803	GPATCH1	100	87.245	Pan_troglodytes
ENSOCUG00000015905	GPATCH1	91	87.779	ENSPANG00000012374	GPATCH1	96	87.779	Papio_anubis
ENSOCUG00000015905	GPATCH1	81	57.088	ENSPKIG00000020745	gpatch1	79	58.157	Paramormyrops_kingsleyae
ENSOCUG00000015905	GPATCH1	99	61.257	ENSPSIG00000013433	GPATCH1	99	61.880	Pelodiscus_sinensis
ENSOCUG00000015905	GPATCH1	100	84.120	ENSPEMG00000000636	Gpatch1	100	81.867	Peromyscus_maniculatus_bairdii
ENSOCUG00000015905	GPATCH1	91	74.883	ENSPCIG00000021003	GPATCH1	95	75.000	Phascolarctos_cinereus
ENSOCUG00000015905	GPATCH1	73	49.286	ENSPREG00000008264	gpatch1	97	44.019	Poecilia_reticulata
ENSOCUG00000015905	GPATCH1	100	84.673	ENSPPYG00000009824	GPATCH1	100	84.673	Pongo_abelii
ENSOCUG00000015905	GPATCH1	83	79.858	ENSPCAG00000005931	GPATCH1	93	80.080	Procavia_capensis
ENSOCUG00000015905	GPATCH1	91	82.959	ENSPCOG00000009674	GPATCH1	96	81.538	Propithecus_coquereli
ENSOCUG00000015905	GPATCH1	83	86.885	ENSPVAG00000017767	GPATCH1	91	86.885	Pteropus_vampyrus
ENSOCUG00000015905	GPATCH1	81	55.058	ENSPNYG00000018189	gpatch1	89	54.974	Pundamilia_nyererei
ENSOCUG00000015905	GPATCH1	91	52.126	ENSPNAG00000013187	gpatch1	92	52.083	Pygocentrus_nattereri
ENSOCUG00000015905	GPATCH1	100	85.086	ENSRNOG00000011584	Gpatch1	100	85.193	Rattus_norvegicus
ENSOCUG00000015905	GPATCH1	100	80.086	ENSRBIG00000034723	GPATCH1	92	80.874	Rhinopithecus_bieti
ENSOCUG00000015905	GPATCH1	100	87.567	ENSRROG00000024428	GPATCH1	100	87.567	Rhinopithecus_roxellana
ENSOCUG00000015905	GPATCH1	100	87.138	ENSSBOG00000034650	GPATCH1	100	87.138	Saimiri_boliviensis_boliviensis
ENSOCUG00000015905	GPATCH1	99	73.191	ENSSHAG00000016016	GPATCH1	99	73.283	Sarcophilus_harrisii
ENSOCUG00000015905	GPATCH1	81	56.171	ENSSFOG00015011535	gpatch1	89	54.430	Scleropages_formosus
ENSOCUG00000015905	GPATCH1	81	50.062	ENSSMAG00000002883	gpatch1	93	47.671	Scophthalmus_maximus
ENSOCUG00000015905	GPATCH1	81	53.117	ENSSDUG00000007444	gpatch1	90	51.101	Seriola_dumerili
ENSOCUG00000015905	GPATCH1	81	53.184	ENSSLDG00000002856	gpatch1	93	52.530	Seriola_lalandi_dorsalis
ENSOCUG00000015905	GPATCH1	72	85.015	ENSSARG00000004108	GPATCH1	72	85.015	Sorex_araneus
ENSOCUG00000015905	GPATCH1	91	88.928	ENSSSCG00000002865	GPATCH1	94	88.457	Sus_scrofa
ENSOCUG00000015905	GPATCH1	99	64.039	ENSTGUG00000009401	GPATCH1	91	62.867	Taeniopygia_guttata
ENSOCUG00000015905	GPATCH1	81	52.393	ENSTRUG00000025081	gpatch1	90	49.825	Takifugu_rubripes
ENSOCUG00000015905	GPATCH1	81	52.393	ENSTRUG00000005785	-	90	49.825	Takifugu_rubripes
ENSOCUG00000015905	GPATCH1	81	53.488	ENSTNIG00000002554	gpatch1	96	54.248	Tetraodon_nigroviridis
ENSOCUG00000015905	GPATCH1	64	77.240	ENSTBEG00000007750	-	84	77.240	Tupaia_belangeri
ENSOCUG00000015905	GPATCH1	99	80.911	ENSTTRG00000012221	GPATCH1	100	80.642	Tursiops_truncatus
ENSOCUG00000015905	GPATCH1	91	87.618	ENSUMAG00000014645	GPATCH1	100	86.993	Ursus_maritimus
ENSOCUG00000015905	GPATCH1	79	94.286	ENSVPAG00000010313	GPATCH1	86	94.565	Vicugna_pacos
ENSOCUG00000015905	GPATCH1	94	88.101	ENSVVUG00000016572	GPATCH1	91	88.249	Vulpes_vulpes
ENSOCUG00000015905	GPATCH1	99	51.471	ENSXETG00000018276	gpatch1	93	54.155	Xenopus_tropicalis