EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000015974 (Gene tree)
Gene ID: 100351294
Gene Symbol: POP4
Alias: -
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 10239 bases
Position: chrGL018722:449051-459289
Accession: 100351294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000013728	UPF0086	PF01868.16	5.6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000015972	POP4-201	1031	-	ENSOCUP00000013728	220 (aa)	XP_002721189	G1TAM1

Gene Model

Click here to download ENSOCUG00000015974's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG
ocu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000015974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000015974	POP4	100	90.909	ENSG00000105171	POP4	100	96.875	Homo_sapiens
ENSOCUG00000015974	POP4	99	87.156	ENSAMEG00000018329	-	99	87.156	Ailuropoda_melanoleuca
ENSOCUG00000015974	POP4	97	76.279	ENSAMEG00000003172	-	97	76.279	Ailuropoda_melanoleuca
ENSOCUG00000015974	POP4	89	64.615	ENSACIG00000008358	pop4	93	64.615	Amphilophus_citrinellus
ENSOCUG00000015974	POP4	89	64.975	ENSAOCG00000010116	pop4	96	64.467	Amphiprion_ocellaris
ENSOCUG00000015974	POP4	89	64.467	ENSAPEG00000002829	pop4	83	63.959	Amphiprion_percula
ENSOCUG00000015974	POP4	89	63.959	ENSATEG00000013028	pop4	89	63.452	Anabas_testudineus
ENSOCUG00000015974	POP4	90	73.604	ENSAPLG00000014051	POP4	95	73.604	Anas_platyrhynchos
ENSOCUG00000015974	POP4	100	89.545	ENSANAG00000020295	POP4	100	89.545	Aotus_nancymaae
ENSOCUG00000015974	POP4	89	63.077	ENSACLG00000000526	pop4	88	63.077	Astatotilapia_calliptera
ENSOCUG00000015974	POP4	92	64.356	ENSAMXG00000002899	pop4	92	64.356	Astyanax_mexicanus
ENSOCUG00000015974	POP4	100	89.545	ENSBTAG00000002223	POP4	100	89.545	Bos_taurus
ENSOCUG00000015974	POP4	100	87.783	ENSCJAG00000046750	POP4	100	89.444	Callithrix_jacchus
ENSOCUG00000015974	POP4	82	90.608	ENSCAFG00000007630	POP4	99	90.608	Canis_familiaris
ENSOCUG00000015974	POP4	100	88.636	ENSCHIG00000016743	POP4	100	88.636	Capra_hircus
ENSOCUG00000015974	POP4	100	89.545	ENSTSYG00000003488	POP4	100	89.545	Carlito_syrichta
ENSOCUG00000015974	POP4	99	66.359	ENSCAPG00000011105	POP4	100	66.359	Cavia_aperea
ENSOCUG00000015974	POP4	100	88.182	ENSCPOG00000002992	POP4	100	88.182	Cavia_porcellus
ENSOCUG00000015974	POP4	100	76.818	ENSCCAG00000034244	-	100	76.818	Cebus_capucinus
ENSOCUG00000015974	POP4	100	89.545	ENSCCAG00000020285	-	100	89.545	Cebus_capucinus
ENSOCUG00000015974	POP4	100	91.818	ENSCATG00000036022	POP4	100	98.958	Cercocebus_atys
ENSOCUG00000015974	POP4	100	89.091	ENSCLAG00000013162	POP4	100	89.091	Chinchilla_lanigera
ENSOCUG00000015974	POP4	99	90.826	ENSCSAG00000004868	POP4	100	90.826	Chlorocebus_sabaeus
ENSOCUG00000015974	POP4	99	66.820	ENSCHOG00000002071	POP4	100	66.820	Choloepus_hoffmanni
ENSOCUG00000015974	POP4	100	72.273	ENSCPBG00000016132	POP4	100	72.273	Chrysemys_picta_bellii
ENSOCUG00000015974	POP4	84	34.031	ENSCING00000023871	-	94	32.461	Ciona_intestinalis
ENSOCUG00000015974	POP4	90	93.434	ENSCANG00000005924	POP4	98	93.434	Colobus_angolensis_palliatus
ENSOCUG00000015974	POP4	100	85.455	ENSCGRG00001017185	Pop4	100	85.000	Cricetulus_griseus_chok1gshd
ENSOCUG00000015974	POP4	100	85.455	ENSCGRG00000008155	Pop4	100	85.000	Cricetulus_griseus_crigri
ENSOCUG00000015974	POP4	92	55.122	ENSCSEG00000002946	pop4	92	54.412	Cynoglossus_semilaevis
ENSOCUG00000015974	POP4	98	43.578	ENSCVAG00000018602	POP4	94	43.243	Cyprinodon_variegatus
ENSOCUG00000015974	POP4	88	70.103	ENSDARG00000101472	pop4	88	70.103	Danio_rerio
ENSOCUG00000015974	POP4	100	88.636	ENSDNOG00000047663	POP4	88	88.636	Dasypus_novemcinctus
ENSOCUG00000015974	POP4	78	85.465	ENSDORG00000008577	Pop4	100	85.465	Dipodomys_ordii
ENSOCUG00000015974	POP4	67	37.662	FBgn0035831	CG8038	70	38.621	Drosophila_melanogaster
ENSOCUG00000015974	POP4	99	73.272	ENSETEG00000003607	POP4	100	73.272	Echinops_telfairi
ENSOCUG00000015974	POP4	100	43.891	ENSEBUG00000008575	pop4	100	43.891	Eptatretus_burgeri
ENSOCUG00000015974	POP4	100	42.918	ENSEBUG00000004305	pop4	100	42.489	Eptatretus_burgeri
ENSOCUG00000015974	POP4	91	48.598	ENSEBUG00000010447	pop4	83	48.131	Eptatretus_burgeri
ENSOCUG00000015974	POP4	100	90.385	ENSECAG00000020206	POP4	82	90.385	Equus_caballus
ENSOCUG00000015974	POP4	91	69.500	ENSEEUG00000013109	POP4	100	69.500	Erinaceus_europaeus
ENSOCUG00000015974	POP4	89	65.816	ENSELUG00000019812	pop4	89	65.816	Esox_lucius
ENSOCUG00000015974	POP4	100	88.636	ENSFCAG00000001619	POP4	100	88.636	Felis_catus
ENSOCUG00000015974	POP4	98	70.370	ENSFALG00000000206	POP4	96	70.370	Ficedula_albicollis
ENSOCUG00000015974	POP4	100	89.545	ENSFDAG00000017859	POP4	100	89.545	Fukomys_damarensis
ENSOCUG00000015974	POP4	90	58.500	ENSFHEG00000012745	pop4	90	58.000	Fundulus_heteroclitus
ENSOCUG00000015974	POP4	87	63.918	ENSGMOG00000000335	pop4	96	64.433	Gadus_morhua
ENSOCUG00000015974	POP4	100	68.636	ENSGALG00000041972	POP4	92	68.636	Gallus_gallus
ENSOCUG00000015974	POP4	71	54.167	ENSGAFG00000003571	pop4	91	53.939	Gambusia_affinis
ENSOCUG00000015974	POP4	99	58.744	ENSGACG00000014510	pop4	100	64.674	Gasterosteus_aculeatus
ENSOCUG00000015974	POP4	100	73.182	ENSGAGG00000024544	POP4	79	73.182	Gopherus_agassizii
ENSOCUG00000015974	POP4	99	90.826	ENSGGOG00000038346	POP4	99	90.826	Gorilla_gorilla
ENSOCUG00000015974	POP4	89	63.077	ENSHBUG00000021821	pop4	88	63.077	Haplochromis_burtoni
ENSOCUG00000015974	POP4	99	89.908	ENSHGLG00000015798	POP4	99	89.908	Heterocephalus_glaber_female
ENSOCUG00000015974	POP4	100	89.545	ENSHGLG00100009737	POP4	100	89.545	Heterocephalus_glaber_male
ENSOCUG00000015974	POP4	89	64.615	ENSHCOG00000020937	pop4	88	64.615	Hippocampus_comes
ENSOCUG00000015974	POP4	100	59.091	ENSIPUG00000013652	pop4	100	59.091	Ictalurus_punctatus
ENSOCUG00000015974	POP4	100	90.000	ENSSTOG00000011016	POP4	100	90.000	Ictidomys_tridecemlineatus
ENSOCUG00000015974	POP4	100	88.636	ENSJJAG00000013376	Pop4	100	88.636	Jaculus_jaculus
ENSOCUG00000015974	POP4	98	60.092	ENSKMAG00000012250	pop4	92	62.439	Kryptolebias_marmoratus
ENSOCUG00000015974	POP4	89	60.914	ENSLBEG00000014139	pop4	88	60.914	Labrus_bergylta
ENSOCUG00000015974	POP4	89	60.914	ENSLBEG00000018846	-	88	60.914	Labrus_bergylta
ENSOCUG00000015974	POP4	100	63.636	ENSLACG00000008581	POP4	98	64.516	Latimeria_chalumnae
ENSOCUG00000015974	POP4	100	69.091	ENSLOCG00000005597	pop4	100	69.091	Lepisosteus_oculatus
ENSOCUG00000015974	POP4	100	87.727	ENSLAFG00000000084	POP4	100	87.727	Loxodonta_africana
ENSOCUG00000015974	POP4	100	91.364	ENSMFAG00000029606	POP4	100	91.364	Macaca_fascicularis
ENSOCUG00000015974	POP4	100	90.045	ENSMMUG00000017424	POP4	100	89.140	Macaca_mulatta
ENSOCUG00000015974	POP4	100	90.045	ENSMNEG00000031374	POP4	100	89.140	Macaca_nemestrina
ENSOCUG00000015974	POP4	100	90.000	ENSMLEG00000043454	POP4	100	90.000	Mandrillus_leucophaeus
ENSOCUG00000015974	POP4	85	66.489	ENSMAMG00000011716	pop4	92	61.574	Mastacembelus_armatus
ENSOCUG00000015974	POP4	89	63.077	ENSMZEG00005002360	pop4	88	63.077	Maylandia_zebra
ENSOCUG00000015974	POP4	99	68.807	ENSMGAG00000005337	POP4	97	68.807	Meleagris_gallopavo
ENSOCUG00000015974	POP4	100	86.364	ENSMAUG00000020110	Pop4	100	86.364	Mesocricetus_auratus
ENSOCUG00000015974	POP4	99	84.862	ENSMICG00000035730	POP4	98	84.862	Microcebus_murinus
ENSOCUG00000015974	POP4	89	64.615	ENSMMOG00000015321	pop4	88	64.615	Mola_mola
ENSOCUG00000015974	POP4	98	79.630	ENSMODG00000029406	POP4	94	79.630	Monodelphis_domestica
ENSOCUG00000015974	POP4	92	64.039	ENSMALG00000012571	pop4	92	64.039	Monopterus_albus
ENSOCUG00000015974	POP4	100	84.163	MGP_CAROLIEiJ_G0029600	Pop4	100	84.163	Mus_caroli
ENSOCUG00000015974	POP4	100	84.615	ENSMUSG00000030423	Pop4	100	83.710	Mus_musculus
ENSOCUG00000015974	POP4	100	85.000	MGP_SPRETEiJ_G0030699	Pop4	100	84.091	Mus_spretus
ENSOCUG00000015974	POP4	100	88.636	ENSMPUG00000008041	-	100	88.636	Mustela_putorius_furo
ENSOCUG00000015974	POP4	100	74.661	ENSMPUG00000008063	-	100	74.661	Mustela_putorius_furo
ENSOCUG00000015974	POP4	99	70.320	ENSMLUG00000010774	POP4	99	70.320	Myotis_lucifugus
ENSOCUG00000015974	POP4	57	84.800	ENSMEUG00000003636	-	100	84.800	Notamacropus_eugenii
ENSOCUG00000015974	POP4	91	96.500	ENSOPRG00000004736	POP4	100	96.500	Ochotona_princeps
ENSOCUG00000015974	POP4	99	89.401	ENSODEG00000013025	POP4	100	89.623	Octodon_degus
ENSOCUG00000015974	POP4	89	62.564	ENSONIG00000003458	pop4	87	62.564	Oreochromis_niloticus
ENSOCUG00000015974	POP4	90	60.784	ENSORLG00000020317	pop4	92	60.294	Oryzias_latipes
ENSOCUG00000015974	POP4	90	60.804	ENSORLG00015011624	pop4	91	59.314	Oryzias_latipes_hsok
ENSOCUG00000015974	POP4	90	62.312	ENSOMEG00000002538	pop4	89	61.809	Oryzias_melastigma
ENSOCUG00000015974	POP4	99	87.615	ENSOGAG00000011168	POP4	99	87.615	Otolemur_garnettii
ENSOCUG00000015974	POP4	100	88.235	ENSOARG00000004041	POP4	100	88.235	Ovis_aries
ENSOCUG00000015974	POP4	100	91.364	ENSPPAG00000040372	POP4	100	91.364	Pan_paniscus
ENSOCUG00000015974	POP4	100	88.636	ENSPPRG00000010502	POP4	100	88.636	Panthera_pardus
ENSOCUG00000015974	POP4	100	88.182	ENSPTIG00000016598	POP4	100	88.182	Panthera_tigris_altaica
ENSOCUG00000015974	POP4	100	91.364	ENSPTRG00000010779	POP4	100	91.364	Pan_troglodytes
ENSOCUG00000015974	POP4	100	91.364	ENSPANG00000008546	POP4	100	91.364	Papio_anubis
ENSOCUG00000015974	POP4	89	71.212	ENSPKIG00000004468	pop4	87	70.707	Paramormyrops_kingsleyae
ENSOCUG00000015974	POP4	100	73.182	ENSPSIG00000015690	POP4	98	78.283	Pelodiscus_sinensis
ENSOCUG00000015974	POP4	90	57.635	ENSPMGG00000008608	pop4	97	57.635	Periophthalmus_magnuspinnatus
ENSOCUG00000015974	POP4	99	71.101	ENSPEMG00000019982	-	100	71.101	Peromyscus_maniculatus_bairdii
ENSOCUG00000015974	POP4	100	84.545	ENSPEMG00000014034	-	96	84.545	Peromyscus_maniculatus_bairdii
ENSOCUG00000015974	POP4	66	68.966	ENSPMAG00000006265	pop4	73	68.966	Petromyzon_marinus
ENSOCUG00000015974	POP4	100	79.545	ENSPCIG00000024738	POP4	95	79.545	Phascolarctos_cinereus
ENSOCUG00000015974	POP4	92	60.096	ENSPFOG00000000925	pop4	94	60.096	Poecilia_formosa
ENSOCUG00000015974	POP4	92	60.096	ENSPLAG00000003161	pop4	94	60.096	Poecilia_latipinna
ENSOCUG00000015974	POP4	92	60.096	ENSPMEG00000002475	pop4	94	60.096	Poecilia_mexicana
ENSOCUG00000015974	POP4	92	60.099	ENSPREG00000022403	pop4	88	60.099	Poecilia_reticulata
ENSOCUG00000015974	POP4	100	91.818	ENSPPYG00000009805	POP4	100	91.818	Pongo_abelii
ENSOCUG00000015974	POP4	99	80.365	ENSPCAG00000007737	POP4	99	80.365	Procavia_capensis
ENSOCUG00000015974	POP4	100	90.455	ENSPCOG00000018055	POP4	100	90.455	Propithecus_coquereli
ENSOCUG00000015974	POP4	100	87.273	ENSPVAG00000006069	POP4	100	87.273	Pteropus_vampyrus
ENSOCUG00000015974	POP4	89	62.564	ENSPNYG00000020038	pop4	88	62.564	Pundamilia_nyererei
ENSOCUG00000015974	POP4	100	60.909	ENSPNAG00000005591	pop4	100	60.909	Pygocentrus_nattereri
ENSOCUG00000015974	POP4	100	83.710	ENSRNOG00000027646	Pop4	100	83.710	Rattus_norvegicus
ENSOCUG00000015974	POP4	80	86.286	ENSRBIG00000044769	POP4	90	89.928	Rhinopithecus_bieti
ENSOCUG00000015974	POP4	100	90.909	ENSRROG00000028903	POP4	100	90.909	Rhinopithecus_roxellana
ENSOCUG00000015974	POP4	100	89.091	ENSSBOG00000032445	POP4	100	89.091	Saimiri_boliviensis_boliviensis
ENSOCUG00000015974	POP4	99	78.440	ENSSHAG00000016888	POP4	99	78.440	Sarcophilus_harrisii
ENSOCUG00000015974	POP4	89	70.408	ENSSFOG00015014556	pop4	87	69.388	Scleropages_formosus
ENSOCUG00000015974	POP4	90	64.824	ENSSMAG00000016611	pop4	93	64.322	Scophthalmus_maximus
ENSOCUG00000015974	POP4	92	63.235	ENSSDUG00000019865	pop4	82	62.745	Seriola_dumerili
ENSOCUG00000015974	POP4	92	62.745	ENSSLDG00000001763	pop4	91	62.255	Seriola_lalandi_dorsalis
ENSOCUG00000015974	POP4	99	86.636	ENSSARG00000004748	POP4	100	86.636	Sorex_araneus
ENSOCUG00000015974	POP4	100	60.811	ENSSPAG00000014364	pop4	97	60.360	Stegastes_partitus
ENSOCUG00000015974	POP4	100	90.455	ENSSSCG00000002854	POP4	100	90.455	Sus_scrofa
ENSOCUG00000015974	POP4	90	73.737	ENSTGUG00000008953	POP4	99	73.737	Taeniopygia_guttata
ENSOCUG00000015974	POP4	89	63.636	ENSTNIG00000006401	pop4	100	60.099	Tetraodon_nigroviridis
ENSOCUG00000015974	POP4	100	87.330	ENSTBEG00000002194	POP4	100	89.140	Tupaia_belangeri
ENSOCUG00000015974	POP4	100	87.273	ENSTTRG00000005882	POP4	100	87.273	Tursiops_truncatus
ENSOCUG00000015974	POP4	100	87.727	ENSUAMG00000003049	-	100	87.727	Ursus_americanus
ENSOCUG00000015974	POP4	100	87.727	ENSUMAG00000007522	-	100	87.727	Ursus_maritimus
ENSOCUG00000015974	POP4	97	84.332	ENSVVUG00000016876	-	76	84.332	Vulpes_vulpes
ENSOCUG00000015974	POP4	98	66.667	ENSXETG00000017598	pop4	98	66.204	Xenopus_tropicalis
ENSOCUG00000015974	POP4	92	60.000	ENSXCOG00000017695	pop4	88	60.000	Xiphophorus_couchianus
ENSOCUG00000015974	POP4	92	60.000	ENSXMAG00000013862	pop4	88	60.000	Xiphophorus_maculatus