EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000016120 (Gene tree)
Gene ID: 100337853
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 24392 bases
Position: chrGL018778:1115027-1139418
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000012655	NOG1	PF06858.14	9e-27	1	1
ENSOCUP00000012655	MMR_HSR1	PF01926.23	5.5e-19	1	1
ENSOCUP00000012655	NOGCT	PF08155.11	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000014719	-	1971	-	ENSOCUP00000012655	634 (aa)	-	G1T7Z2

Gene Model

Click here to download ENSOCUG00000016120's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000016120's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000016120	-	59	89.446	ENSOCUG00000014716	-	100	89.446

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000016120	-	100	93.218	ENSG00000107937	GTPBP4	100	98.571	Homo_sapiens
ENSOCUG00000016120	-	100	80.599	ENSAPOG00000020433	gtpbp4	100	77.008	Acanthochromis_polyacanthus
ENSOCUG00000016120	-	100	91.483	ENSAMEG00000001845	GTPBP4	100	91.483	Ailuropoda_melanoleuca
ENSOCUG00000016120	-	100	76.814	ENSACIG00000018629	gtpbp4	100	76.814	Amphilophus_citrinellus
ENSOCUG00000016120	-	100	80.915	ENSAOCG00000000427	gtpbp4	93	80.915	Amphiprion_ocellaris
ENSOCUG00000016120	-	100	81.073	ENSAPEG00000002544	gtpbp4	100	81.073	Amphiprion_percula
ENSOCUG00000016120	-	100	81.703	ENSATEG00000012635	gtpbp4	95	81.703	Anabas_testudineus
ENSOCUG00000016120	-	52	77.039	ENSAPLG00000013790	-	100	77.039	Anas_platyrhynchos
ENSOCUG00000016120	-	100	83.596	ENSACAG00000002943	GTPBP4	100	83.596	Anolis_carolinensis
ENSOCUG00000016120	-	87	86.705	ENSANAG00000029209	-	100	86.416	Aotus_nancymaae
ENSOCUG00000016120	-	99	83.228	ENSANAG00000022188	-	99	83.070	Aotus_nancymaae
ENSOCUG00000016120	-	71	84.152	ENSACLG00000026330	gtpbp4	92	92.667	Astatotilapia_calliptera
ENSOCUG00000016120	-	100	80.757	ENSAMXG00000019771	gtpbp4	100	80.757	Astyanax_mexicanus
ENSOCUG00000016120	-	100	91.483	ENSBTAG00000014917	GTPBP4	100	91.483	Bos_taurus
ENSOCUG00000016120	-	99	51.092	WBGene00020297	nog-1	99	61.364	Caenorhabditis_elegans
ENSOCUG00000016120	-	100	93.711	ENSCJAG00000008494	-	100	94.025	Callithrix_jacchus
ENSOCUG00000016120	-	100	92.296	ENSCJAG00000022962	-	100	92.296	Callithrix_jacchus
ENSOCUG00000016120	-	93	91.652	ENSCAFG00000005536	GTPBP4	100	91.652	Canis_familiaris
ENSOCUG00000016120	-	100	92.114	ENSCAFG00020004307	GTPBP4	100	92.114	Canis_lupus_dingo
ENSOCUG00000016120	-	100	91.009	ENSCHIG00000018346	GTPBP4	100	91.009	Capra_hircus
ENSOCUG00000016120	-	100	93.060	ENSTSYG00000004977	GTPBP4	100	93.060	Carlito_syrichta
ENSOCUG00000016120	-	99	82.481	ENSCAPG00000002134	GTPBP4	99	82.481	Cavia_aperea
ENSOCUG00000016120	-	100	93.375	ENSCPOG00000013736	GTPBP4	100	93.375	Cavia_porcellus
ENSOCUG00000016120	-	99	93.207	ENSCCAG00000021627	-	92	93.523	Cebus_capucinus
ENSOCUG00000016120	-	100	71.293	ENSCCAG00000030115	-	100	71.136	Cebus_capucinus
ENSOCUG00000016120	-	100	93.849	ENSCATG00000004303	GTPBP4	100	93.849	Cercocebus_atys
ENSOCUG00000016120	-	100	93.533	ENSCLAG00000011323	GTPBP4	100	93.533	Chinchilla_lanigera
ENSOCUG00000016120	-	100	94.006	ENSCSAG00000014097	GTPBP4	100	94.006	Chlorocebus_sabaeus
ENSOCUG00000016120	-	96	97.305	ENSCHOG00000012602	GTPBP4	88	97.305	Choloepus_hoffmanni
ENSOCUG00000016120	-	100	84.858	ENSCPBG00000008398	GTPBP4	100	84.858	Chrysemys_picta_bellii
ENSOCUG00000016120	-	100	61.646	ENSCING00000001957	-	100	62.267	Ciona_intestinalis
ENSOCUG00000016120	-	100	62.043	ENSCSAVG00000009793	-	99	77.994	Ciona_savignyi
ENSOCUG00000016120	-	100	89.482	ENSCANG00000014168	GTPBP4	100	89.482	Colobus_angolensis_palliatus
ENSOCUG00000016120	-	100	94.953	ENSCGRG00001013765	Gtpbp4	100	94.953	Cricetulus_griseus_chok1gshd
ENSOCUG00000016120	-	100	94.953	ENSCGRG00000012171	Gtpbp4	100	94.953	Cricetulus_griseus_crigri
ENSOCUG00000016120	-	100	76.656	ENSCSEG00000007352	gtpbp4	100	76.656	Cynoglossus_semilaevis
ENSOCUG00000016120	-	100	80.126	ENSCVAG00000008993	gtpbp4	100	80.126	Cyprinodon_variegatus
ENSOCUG00000016120	-	100	80.442	ENSDARG00000018961	gtpbp4	100	80.442	Danio_rerio
ENSOCUG00000016120	-	67	91.294	ENSDNOG00000006746	GTPBP4	100	91.294	Dasypus_novemcinctus
ENSOCUG00000016120	-	82	100.000	ENSDORG00000010884	Gtpbp4	96	100.000	Dipodomys_ordii
ENSOCUG00000016120	-	100	58.055	FBgn0028473	Non1	100	57.492	Drosophila_melanogaster
ENSOCUG00000016120	-	74	90.816	ENSETEG00000016840	-	71	90.816	Echinops_telfairi
ENSOCUG00000016120	-	98	62.939	ENSEBUG00000010311	gtpbp4	99	62.300	Eptatretus_burgeri
ENSOCUG00000016120	-	100	93.533	ENSEASG00005019082	GTPBP4	100	93.533	Equus_asinus_asinus
ENSOCUG00000016120	-	100	93.533	ENSECAG00000001700	GTPBP4	100	93.533	Equus_caballus
ENSOCUG00000016120	-	100	93.531	ENSEEUG00000009889	GTPBP4	91	93.531	Erinaceus_europaeus
ENSOCUG00000016120	-	100	79.560	ENSELUG00000008578	gtpbp4	96	80.068	Esox_lucius
ENSOCUG00000016120	-	100	92.587	ENSFCAG00000026213	GTPBP4	100	92.587	Felis_catus
ENSOCUG00000016120	-	99	83.994	ENSFALG00000006971	GTPBP4	87	85.174	Ficedula_albicollis
ENSOCUG00000016120	-	100	94.322	ENSFDAG00000000998	GTPBP4	100	94.322	Fukomys_damarensis
ENSOCUG00000016120	-	100	80.915	ENSFHEG00000012922	gtpbp4	100	80.915	Fundulus_heteroclitus
ENSOCUG00000016120	-	100	79.495	ENSGMOG00000016090	gtpbp4	100	79.495	Gadus_morhua
ENSOCUG00000016120	-	100	85.016	ENSGALG00000006703	GTPBP4	100	85.016	Gallus_gallus
ENSOCUG00000016120	-	100	81.388	ENSGAFG00000002075	gtpbp4	100	81.388	Gambusia_affinis
ENSOCUG00000016120	-	100	80.126	ENSGACG00000017481	gtpbp4	100	80.126	Gasterosteus_aculeatus
ENSOCUG00000016120	-	93	85.009	ENSGAGG00000018689	GTPBP4	100	85.009	Gopherus_agassizii
ENSOCUG00000016120	-	100	93.375	ENSGGOG00000013372	GTPBP4	100	93.375	Gorilla_gorilla
ENSOCUG00000016120	-	100	81.073	ENSHBUG00000000192	gtpbp4	100	81.073	Haplochromis_burtoni
ENSOCUG00000016120	-	100	93.691	ENSHGLG00000013071	GTPBP4	100	93.691	Heterocephalus_glaber_female
ENSOCUG00000016120	-	100	93.691	ENSHGLG00100017850	GTPBP4	100	93.691	Heterocephalus_glaber_male
ENSOCUG00000016120	-	100	85.354	ENSHGLG00100002964	-	100	85.354	Heterocephalus_glaber_male
ENSOCUG00000016120	-	100	81.102	ENSHCOG00000011543	gtpbp4	100	81.102	Hippocampus_comes
ENSOCUG00000016120	-	100	81.230	ENSIPUG00000014417	GTPBP4	100	81.230	Ictalurus_punctatus
ENSOCUG00000016120	-	100	95.268	ENSSTOG00000010042	-	100	95.268	Ictidomys_tridecemlineatus
ENSOCUG00000016120	-	100	86.278	ENSSTOG00000023023	-	100	86.278	Ictidomys_tridecemlineatus
ENSOCUG00000016120	-	100	93.533	ENSJJAG00000010021	Gtpbp4	100	93.533	Jaculus_jaculus
ENSOCUG00000016120	-	100	79.180	ENSKMAG00000021705	gtpbp4	100	79.180	Kryptolebias_marmoratus
ENSOCUG00000016120	-	100	76.063	ENSLBEG00000021419	gtpbp4	100	79.422	Labrus_bergylta
ENSOCUG00000016120	-	100	82.334	ENSLACG00000001449	GTPBP4	100	82.334	Latimeria_chalumnae
ENSOCUG00000016120	-	100	80.000	ENSLOCG00000012279	gtpbp4	100	80.000	Lepisosteus_oculatus
ENSOCUG00000016120	-	100	92.902	ENSLAFG00000018578	GTPBP4	100	92.902	Loxodonta_africana
ENSOCUG00000016120	-	100	93.533	ENSMFAG00000046251	GTPBP4	100	93.533	Macaca_fascicularis
ENSOCUG00000016120	-	100	90.694	ENSMMUG00000010813	GTPBP4	100	90.694	Macaca_mulatta
ENSOCUG00000016120	-	100	93.691	ENSMNEG00000044366	GTPBP4	100	93.691	Macaca_nemestrina
ENSOCUG00000016120	-	100	93.691	ENSMLEG00000039605	GTPBP4	100	93.691	Mandrillus_leucophaeus
ENSOCUG00000016120	-	100	81.703	ENSMAMG00000013763	gtpbp4	92	81.703	Mastacembelus_armatus
ENSOCUG00000016120	-	100	81.073	ENSMZEG00005006621	gtpbp4	100	81.073	Maylandia_zebra
ENSOCUG00000016120	-	100	94.953	ENSMAUG00000000571	Gtpbp4	100	94.953	Mesocricetus_auratus
ENSOCUG00000016120	-	100	93.375	ENSMICG00000013332	GTPBP4	100	93.375	Microcebus_murinus
ENSOCUG00000016120	-	100	95.110	ENSMOCG00000002209	Gtpbp4	100	95.110	Microtus_ochrogaster
ENSOCUG00000016120	-	100	77.445	ENSMMOG00000011257	gtpbp4	100	77.445	Mola_mola
ENSOCUG00000016120	-	100	88.959	ENSMODG00000005978	GTPBP4	100	88.959	Monodelphis_domestica
ENSOCUG00000016120	-	100	79.653	ENSMALG00000012488	gtpbp4	100	79.653	Monopterus_albus
ENSOCUG00000016120	-	99	93.513	MGP_CAROLIEiJ_G0018215	Gtpbp4	100	93.841	Mus_caroli
ENSOCUG00000016120	-	100	94.637	ENSMUSG00000021149	Gtpbp4	100	94.637	Mus_musculus
ENSOCUG00000016120	-	100	94.479	MGP_PahariEiJ_G0019265	Gtpbp4	100	94.479	Mus_pahari
ENSOCUG00000016120	-	99	94.462	MGP_SPRETEiJ_G0019073	Gtpbp4	100	94.462	Mus_spretus
ENSOCUG00000016120	-	93	90.801	ENSMPUG00000016221	GTPBP4	100	90.801	Mustela_putorius_furo
ENSOCUG00000016120	-	100	91.798	ENSMLUG00000028192	GTPBP4	100	91.798	Myotis_lucifugus
ENSOCUG00000016120	-	100	93.060	ENSNGAG00000015364	Gtpbp4	100	93.060	Nannospalax_galili
ENSOCUG00000016120	-	87	82.222	ENSNBRG00000019965	gtpbp4	86	82.222	Neolamprologus_brichardi
ENSOCUG00000016120	-	100	93.691	ENSNLEG00000013495	GTPBP4	100	93.691	Nomascus_leucogenys
ENSOCUG00000016120	-	64	93.939	ENSMEUG00000016215	-	67	96.875	Notamacropus_eugenii
ENSOCUG00000016120	-	88	98.383	ENSOPRG00000008671	GTPBP4	84	98.383	Ochotona_princeps
ENSOCUG00000016120	-	100	92.587	ENSODEG00000019152	-	100	92.587	Octodon_degus
ENSOCUG00000016120	-	100	94.953	ENSODEG00000000962	-	100	94.953	Octodon_degus
ENSOCUG00000016120	-	100	81.388	ENSONIG00000017707	gtpbp4	100	81.388	Oreochromis_niloticus
ENSOCUG00000016120	-	99	86.120	ENSOANG00000006095	-	99	86.120	Ornithorhynchus_anatinus
ENSOCUG00000016120	-	100	79.811	ENSORLG00000006151	gtpbp4	100	79.811	Oryzias_latipes
ENSOCUG00000016120	-	100	79.811	ENSORLG00020020899	gtpbp4	100	79.811	Oryzias_latipes_hni
ENSOCUG00000016120	-	100	79.653	ENSORLG00015020562	gtpbp4	100	79.653	Oryzias_latipes_hsok
ENSOCUG00000016120	-	100	80.126	ENSOMEG00000019684	gtpbp4	100	80.126	Oryzias_melastigma
ENSOCUG00000016120	-	100	94.006	ENSOGAG00000011941	GTPBP4	100	94.006	Otolemur_garnettii
ENSOCUG00000016120	-	100	90.738	ENSOARG00000015047	GTPBP4	100	90.581	Ovis_aries
ENSOCUG00000016120	-	100	93.375	ENSPPAG00000042066	GTPBP4	100	93.375	Pan_paniscus
ENSOCUG00000016120	-	100	92.744	ENSPPRG00000009895	GTPBP4	100	92.744	Panthera_pardus
ENSOCUG00000016120	-	100	92.744	ENSPTIG00000008569	GTPBP4	100	92.744	Panthera_tigris_altaica
ENSOCUG00000016120	-	71	92.936	ENSPTRG00000002236	GTPBP4	86	93.512	Pan_troglodytes
ENSOCUG00000016120	-	100	93.691	ENSPANG00000023543	GTPBP4	100	93.691	Papio_anubis
ENSOCUG00000016120	-	100	80.284	ENSPKIG00000012301	gtpbp4	100	80.284	Paramormyrops_kingsleyae
ENSOCUG00000016120	-	56	90.756	ENSPSIG00000005442	GTPBP4	93	90.756	Pelodiscus_sinensis
ENSOCUG00000016120	-	100	76.972	ENSPMGG00000001462	gtpbp4	100	76.972	Periophthalmus_magnuspinnatus
ENSOCUG00000016120	-	100	94.479	ENSPEMG00000015091	-	100	94.479	Peromyscus_maniculatus_bairdii
ENSOCUG00000016120	-	100	69.243	ENSPEMG00000012279	-	100	69.243	Peromyscus_maniculatus_bairdii
ENSOCUG00000016120	-	100	74.606	ENSPMAG00000000905	gtpbp4	100	74.606	Petromyzon_marinus
ENSOCUG00000016120	-	100	89.117	ENSPCIG00000026082	GTPBP4	100	89.117	Phascolarctos_cinereus
ENSOCUG00000016120	-	100	81.230	ENSPFOG00000000026	gtpbp4	100	81.230	Poecilia_formosa
ENSOCUG00000016120	-	92	81.368	ENSPLAG00000002898	gtpbp4	97	81.368	Poecilia_latipinna
ENSOCUG00000016120	-	100	81.388	ENSPMEG00000016422	gtpbp4	100	81.388	Poecilia_mexicana
ENSOCUG00000016120	-	100	77.129	ENSPREG00000019870	gtpbp4	100	77.129	Poecilia_reticulata
ENSOCUG00000016120	-	100	93.849	ENSPPYG00000002037	GTPBP4	100	93.849	Pongo_abelii
ENSOCUG00000016120	-	100	89.117	ENSPCOG00000014382	-	100	89.117	Propithecus_coquereli
ENSOCUG00000016120	-	97	87.480	ENSPCOG00000014602	-	100	87.317	Propithecus_coquereli
ENSOCUG00000016120	-	92	94.654	ENSPVAG00000005882	GTPBP4	86	94.654	Pteropus_vampyrus
ENSOCUG00000016120	-	100	71.451	ENSPNYG00000024251	gtpbp4	100	71.451	Pundamilia_nyererei
ENSOCUG00000016120	-	100	81.546	ENSPNAG00000019977	gtpbp4	100	81.546	Pygocentrus_nattereri
ENSOCUG00000016120	-	100	94.182	ENSRNOG00000016217	Gtpbp4	100	94.182	Rattus_norvegicus
ENSOCUG00000016120	-	100	93.533	ENSRBIG00000028875	GTPBP4	100	93.533	Rhinopithecus_bieti
ENSOCUG00000016120	-	100	93.533	ENSRROG00000030798	GTPBP4	100	93.533	Rhinopithecus_roxellana
ENSOCUG00000016120	-	99	46.440	YPL093W	-	99	46.440	Saccharomyces_cerevisiae
ENSOCUG00000016120	-	100	94.182	ENSSBOG00000028421	GTPBP4	100	93.711	Saimiri_boliviensis_boliviensis
ENSOCUG00000016120	-	99	88.535	ENSSHAG00000014713	GTPBP4	94	88.535	Sarcophilus_harrisii
ENSOCUG00000016120	-	100	81.073	ENSSFOG00015003167	gtpbp4	100	81.073	Scleropages_formosus
ENSOCUG00000016120	-	100	80.284	ENSSMAG00000005863	gtpbp4	100	80.284	Scophthalmus_maximus
ENSOCUG00000016120	-	100	80.915	ENSSDUG00000006534	gtpbp4	100	80.915	Seriola_dumerili
ENSOCUG00000016120	-	100	80.757	ENSSLDG00000020688	gtpbp4	100	80.757	Seriola_lalandi_dorsalis
ENSOCUG00000016120	-	61	99.010	ENSSARG00000003409	-	79	99.010	Sorex_araneus
ENSOCUG00000016120	-	100	84.543	ENSSPUG00000002153	GTPBP4	100	84.543	Sphenodon_punctatus
ENSOCUG00000016120	-	63	70.277	ENSSPAG00000014583	gtpbp4	100	70.529	Stegastes_partitus
ENSOCUG00000016120	-	100	89.432	ENSSSCG00000028602	GTPBP4	100	89.432	Sus_scrofa
ENSOCUG00000016120	-	99	83.280	ENSTGUG00000000820	GTPBP4	100	84.554	Taeniopygia_guttata
ENSOCUG00000016120	-	100	79.968	ENSTRUG00000003900	gtpbp4	100	79.968	Takifugu_rubripes
ENSOCUG00000016120	-	100	81.073	ENSTNIG00000007992	gtpbp4	100	81.073	Tetraodon_nigroviridis
ENSOCUG00000016120	-	100	78.404	ENSTBEG00000003613	GTPBP4	100	78.247	Tupaia_belangeri
ENSOCUG00000016120	-	100	85.938	ENSTTRG00000011163	GTPBP4	100	85.938	Tursiops_truncatus
ENSOCUG00000016120	-	100	92.114	ENSUAMG00000013191	GTPBP4	100	92.114	Ursus_americanus
ENSOCUG00000016120	-	93	91.482	ENSUMAG00000016138	GTPBP4	100	91.482	Ursus_maritimus
ENSOCUG00000016120	-	100	91.956	ENSVVUG00000008608	GTPBP4	98	91.956	Vulpes_vulpes
ENSOCUG00000016120	-	100	72.555	ENSXETG00000018097	gtpbp4	100	72.555	Xenopus_tropicalis
ENSOCUG00000016120	-	100	75.510	ENSXCOG00000019953	gtpbp4	98	75.510	Xiphophorus_couchianus
ENSOCUG00000016120	-	100	81.005	ENSXMAG00000006719	gtpbp4	100	81.005	Xiphophorus_maculatus