EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000016128 (Gene tree)
Gene ID: 100337846
Gene Symbol: TNRC6B
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 199526 bases
Position: chrGL018734:2028676-2228201
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000016832	Ago_hook	PF10427.9	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000024213	TNRC6B-201	6995	-	ENSOCUP00000016832	1808 (aa)	-	G1TIR1

Gene Model

Click here to download ENSOCUG00000016128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000016128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000016128	TNRC6B	79	32.002	ENSOCUG00000006122	TNRC6C	52	31.271
ENSOCUG00000016128	TNRC6B	96	36.639	ENSOCUG00000004325	TNRC6A	99	35.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000016128	TNRC6B	98	93.521	ENSG00000100354	TNRC6B	100	97.393	Homo_sapiens
ENSOCUG00000016128	TNRC6B	99	91.554	ENSAMEG00000011025	TNRC6B	100	91.189	Ailuropoda_melanoleuca
ENSOCUG00000016128	TNRC6B	96	82.517	ENSAPLG00000009347	TNRC6B	100	84.620	Anas_platyrhynchos
ENSOCUG00000016128	TNRC6B	97	73.296	ENSACAG00000007281	TNRC6B	99	73.127	Anolis_carolinensis
ENSOCUG00000016128	TNRC6B	97	95.252	ENSANAG00000035042	TNRC6B	100	97.512	Aotus_nancymaae
ENSOCUG00000016128	TNRC6B	51	47.760	ENSAMXG00000008707	tnrc6b	82	46.612	Astyanax_mexicanus
ENSOCUG00000016128	TNRC6B	98	95.222	ENSBTAG00000021076	TNRC6B	99	95.252	Bos_taurus
ENSOCUG00000016128	TNRC6B	96	96.550	ENSCJAG00000002732	TNRC6B	99	99.718	Callithrix_jacchus
ENSOCUG00000016128	TNRC6B	96	95.771	ENSCAFG00000001255	TNRC6B	99	93.103	Canis_familiaris
ENSOCUG00000016128	TNRC6B	99	95.296	ENSCAFG00020002189	TNRC6B	99	95.241	Canis_lupus_dingo
ENSOCUG00000016128	TNRC6B	99	95.206	ENSCHIG00000003491	TNRC6B	100	95.429	Capra_hircus
ENSOCUG00000016128	TNRC6B	97	95.336	ENSTSYG00000011836	TNRC6B	100	97.268	Carlito_syrichta
ENSOCUG00000016128	TNRC6B	100	94.997	ENSCPOG00000005705	TNRC6B	100	95.162	Cavia_porcellus
ENSOCUG00000016128	TNRC6B	96	95.575	ENSCCAG00000019912	TNRC6B	100	96.277	Cebus_capucinus
ENSOCUG00000016128	TNRC6B	96	96.603	ENSCATG00000029291	TNRC6B	100	96.441	Cercocebus_atys
ENSOCUG00000016128	TNRC6B	100	95.047	ENSCLAG00000016942	TNRC6B	100	95.212	Chinchilla_lanigera
ENSOCUG00000016128	TNRC6B	97	92.744	ENSCSAG00000006021	TNRC6B	99	92.687	Chlorocebus_sabaeus
ENSOCUG00000016128	TNRC6B	89	85.535	ENSCPBG00000022932	TNRC6B	99	85.236	Chrysemys_picta_bellii
ENSOCUG00000016128	TNRC6B	96	96.546	ENSCANG00000030776	TNRC6B	100	97.390	Colobus_angolensis_palliatus
ENSOCUG00000016128	TNRC6B	96	94.571	ENSCGRG00001020166	Tnrc6b	99	94.514	Cricetulus_griseus_chok1gshd
ENSOCUG00000016128	TNRC6B	100	94.662	ENSCGRG00000016696	Tnrc6b	99	94.802	Cricetulus_griseus_crigri
ENSOCUG00000016128	TNRC6B	100	94.598	ENSDNOG00000012744	TNRC6B	100	94.978	Dasypus_novemcinctus
ENSOCUG00000016128	TNRC6B	100	95.861	ENSDORG00000003386	Tnrc6b	100	95.861	Dipodomys_ordii
ENSOCUG00000016128	TNRC6B	97	84.211	ENSETEG00000006570	TNRC6B	99	84.493	Echinops_telfairi
ENSOCUG00000016128	TNRC6B	99	95.817	ENSEASG00005005306	TNRC6B	99	95.725	Equus_asinus_asinus
ENSOCUG00000016128	TNRC6B	100	96.143	ENSECAG00000009759	TNRC6B	99	99.500	Equus_caballus
ENSOCUG00000016128	TNRC6B	56	97.070	ENSEEUG00000008690	-	59	97.070	Erinaceus_europaeus
ENSOCUG00000016128	TNRC6B	100	95.547	ENSFCAG00000004791	TNRC6B	100	95.492	Felis_catus
ENSOCUG00000016128	TNRC6B	93	87.891	ENSFALG00000012195	TNRC6B	100	87.655	Ficedula_albicollis
ENSOCUG00000016128	TNRC6B	100	95.264	ENSFDAG00000021368	TNRC6B	100	95.430	Fukomys_damarensis
ENSOCUG00000016128	TNRC6B	97	88.512	ENSGALG00000012050	TNRC6B	97	88.285	Gallus_gallus
ENSOCUG00000016128	TNRC6B	97	88.093	ENSGAGG00000025188	TNRC6B	98	87.641	Gopherus_agassizii
ENSOCUG00000016128	TNRC6B	97	95.836	ENSGGOG00000008444	TNRC6B	100	97.393	Gorilla_gorilla
ENSOCUG00000016128	TNRC6B	100	95.220	ENSHGLG00000009306	TNRC6B	100	95.220	Heterocephalus_glaber_female
ENSOCUG00000016128	TNRC6B	100	95.585	ENSHGLG00100018108	TNRC6B	100	95.585	Heterocephalus_glaber_male
ENSOCUG00000016128	TNRC6B	80	43.590	ENSIPUG00000001515	tnrc6b	95	45.938	Ictalurus_punctatus
ENSOCUG00000016128	TNRC6B	100	96.082	ENSSTOG00000008927	TNRC6B	100	96.026	Ictidomys_tridecemlineatus
ENSOCUG00000016128	TNRC6B	100	94.656	ENSJJAG00000015779	Tnrc6b	100	94.766	Jaculus_jaculus
ENSOCUG00000016128	TNRC6B	98	61.753	ENSLACG00000000628	-	99	61.949	Latimeria_chalumnae
ENSOCUG00000016128	TNRC6B	76	96.361	ENSLAFG00000014473	TNRC6B	100	95.426	Loxodonta_africana
ENSOCUG00000016128	TNRC6B	96	96.661	ENSMFAG00000003862	TNRC6B	100	96.560	Macaca_fascicularis
ENSOCUG00000016128	TNRC6B	100	96.521	ENSMMUG00000021345	TNRC6B	100	97.628	Macaca_mulatta
ENSOCUG00000016128	TNRC6B	97	96.653	ENSMNEG00000042745	TNRC6B	100	96.653	Macaca_nemestrina
ENSOCUG00000016128	TNRC6B	96	96.661	ENSMLEG00000041780	TNRC6B	100	97.628	Mandrillus_leucophaeus
ENSOCUG00000016128	TNRC6B	98	83.996	ENSMGAG00000012333	TNRC6B	99	82.585	Meleagris_gallopavo
ENSOCUG00000016128	TNRC6B	100	93.451	ENSMAUG00000016123	Tnrc6b	100	93.506	Mesocricetus_auratus
ENSOCUG00000016128	TNRC6B	97	96.152	ENSMICG00000014056	TNRC6B	100	96.809	Microcebus_murinus
ENSOCUG00000016128	TNRC6B	97	96.000	ENSMOCG00000020334	Tnrc6b	100	96.000	Microtus_ochrogaster
ENSOCUG00000016128	TNRC6B	100	94.056	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	94.221	Mus_caroli
ENSOCUG00000016128	TNRC6B	100	94.056	ENSMUSG00000047888	Tnrc6b	100	94.221	Mus_musculus
ENSOCUG00000016128	TNRC6B	100	93.667	MGP_PahariEiJ_G0020045	Tnrc6b	100	93.833	Mus_pahari
ENSOCUG00000016128	TNRC6B	100	94.221	MGP_SPRETEiJ_G0020941	Tnrc6b	100	94.386	Mus_spretus
ENSOCUG00000016128	TNRC6B	95	96.947	ENSMPUG00000016442	TNRC6B	99	83.324	Mustela_putorius_furo
ENSOCUG00000016128	TNRC6B	97	90.884	ENSMLUG00000008765	TNRC6B	99	90.735	Myotis_lucifugus
ENSOCUG00000016128	TNRC6B	100	94.887	ENSNGAG00000021294	Tnrc6b	100	94.777	Nannospalax_galili
ENSOCUG00000016128	TNRC6B	86	92.714	ENSNLEG00000015311	TNRC6B	100	97.630	Nomascus_leucogenys
ENSOCUG00000016128	TNRC6B	91	87.974	ENSOPRG00000012054	TNRC6B	90	91.600	Ochotona_princeps
ENSOCUG00000016128	TNRC6B	100	95.875	ENSODEG00000013146	TNRC6B	100	95.875	Octodon_degus
ENSOCUG00000016128	TNRC6B	97	91.512	ENSOGAG00000011096	TNRC6B	99	90.924	Otolemur_garnettii
ENSOCUG00000016128	TNRC6B	100	94.792	ENSOARG00000017238	TNRC6B	100	94.737	Ovis_aries
ENSOCUG00000016128	TNRC6B	96	96.375	ENSPPAG00000028514	TNRC6B	100	97.509	Pan_paniscus
ENSOCUG00000016128	TNRC6B	97	92.918	ENSPPRG00000017741	TNRC6B	100	97.163	Panthera_pardus
ENSOCUG00000016128	TNRC6B	97	88.285	ENSPTIG00000022064	TNRC6B	99	91.103	Panthera_tigris_altaica
ENSOCUG00000016128	TNRC6B	96	96.165	ENSPTRG00000047826	TNRC6B	100	97.628	Pan_troglodytes
ENSOCUG00000016128	TNRC6B	96	86.500	ENSPANG00000009271	TNRC6B	99	90.323	Papio_anubis
ENSOCUG00000016128	TNRC6B	97	87.804	ENSPSIG00000005318	TNRC6B	99	87.465	Pelodiscus_sinensis
ENSOCUG00000016128	TNRC6B	100	93.736	ENSPEMG00000011403	Tnrc6b	100	93.901	Peromyscus_maniculatus_bairdii
ENSOCUG00000016128	TNRC6B	97	86.853	ENSPCIG00000020347	TNRC6B	99	86.340	Phascolarctos_cinereus
ENSOCUG00000016128	TNRC6B	89	40.903	ENSPFOG00000006033	-	53	50.808	Poecilia_formosa
ENSOCUG00000016128	TNRC6B	98	93.577	ENSPPYG00000011849	TNRC6B	99	93.577	Pongo_abelii
ENSOCUG00000016128	TNRC6B	77	87.523	ENSPCAG00000008739	TNRC6B	77	88.257	Procavia_capensis
ENSOCUG00000016128	TNRC6B	99	93.684	ENSPCOG00000020790	TNRC6B	100	96.930	Propithecus_coquereli
ENSOCUG00000016128	TNRC6B	93	93.902	ENSPVAG00000004975	TNRC6B	94	93.902	Pteropus_vampyrus
ENSOCUG00000016128	TNRC6B	74	43.433	ENSPNAG00000011713	tnrc6b	60	51.886	Pygocentrus_nattereri
ENSOCUG00000016128	TNRC6B	100	93.589	ENSRNOG00000024907	Tnrc6b	100	93.644	Rattus_norvegicus
ENSOCUG00000016128	TNRC6B	98	93.743	ENSRBIG00000035576	TNRC6B	100	98.844	Rhinopithecus_bieti
ENSOCUG00000016128	TNRC6B	97	96.540	ENSRROG00000031135	TNRC6B	100	97.272	Rhinopithecus_roxellana
ENSOCUG00000016128	TNRC6B	97	93.598	ENSSBOG00000029743	TNRC6B	96	98.246	Saimiri_boliviensis_boliviensis
ENSOCUG00000016128	TNRC6B	97	82.077	ENSSHAG00000009692	TNRC6B	99	80.958	Sarcophilus_harrisii
ENSOCUG00000016128	TNRC6B	65	86.441	ENSSARG00000007971	-	66	86.441	Sorex_araneus
ENSOCUG00000016128	TNRC6B	100	96.026	ENSSSCG00000000078	TNRC6B	99	96.169	Sus_scrofa
ENSOCUG00000016128	TNRC6B	100	90.558	ENSTTRG00000011465	TNRC6B	100	90.502	Tursiops_truncatus
ENSOCUG00000016128	TNRC6B	99	94.605	ENSUAMG00000007174	TNRC6B	98	95.917	Ursus_americanus
ENSOCUG00000016128	TNRC6B	97	96.034	ENSUMAG00000014336	TNRC6B	100	96.034	Ursus_maritimus
ENSOCUG00000016128	TNRC6B	68	88.485	ENSVPAG00000001467	TNRC6B	75	87.273	Vicugna_pacos
ENSOCUG00000016128	TNRC6B	100	95.870	ENSVVUG00000007064	TNRC6B	100	96.098	Vulpes_vulpes