EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOCUG00000016174 (Gene tree)
Gene ID
100345355
Gene Symbol
PABPN1
Alias
-
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Oryctolagus_cuniculus
Status
putative
Strand
Plus strand
Length
4427 bases
Position
chr17:43524018-43528444
Accession
100345355
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOCUP00000013898RRM_1PF00076.224.6e-1511
ENSOCUP00000007518RRM_1PF00076.225.4e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOCUT00000008704PABPN1-202900-ENSOCUP00000007518300 (aa)-G1SVP9
ENSOCUT00000016169PABPN1-201822XM_008269611ENSOCUP00000013898273 (aa)XP_008267833G1TB22
Gene Model
Click here to download ENSOCUG00000016174's gene model file
Pathways
Pathway IDPathway NameSource
ocu03015mRNA surveillance pathwayKEGG
ocu05164Influenza AKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000016174's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOCUG00000016174PABPN110096.711ENSG00000100836PABPN110098.876Homo_sapiens
ENSOCUG00000016174PABPN16998.942ENSG00000258643BCL2L2-PABPN15798.942Homo_sapiens
ENSOCUG00000016174PABPN19570.229ENSAPOG00000016425pabpn18681.553Acanthochromis_polyacanthus
ENSOCUG00000016174PABPN16998.942ENSAMEG00000007048BCL2L2-PABPN110098.942Ailuropoda_melanoleuca
ENSOCUG00000016174PABPN19269.020ENSACIG00000021744pabpn19481.548Amphilophus_citrinellus
ENSOCUG00000016174PABPN19570.229ENSAOCG00000015805pabpn18681.553Amphiprion_ocellaris
ENSOCUG00000016174PABPN19570.229ENSAPEG00000009623pabpn18681.553Amphiprion_percula
ENSOCUG00000016174PABPN19570.611ENSATEG00000020531pabpn18682.039Anabas_testudineus
ENSOCUG00000016174PABPN17487.685ENSACAG00000006185-7486.603Anolis_carolinensis
ENSOCUG00000016174PABPN110090.000ENSANAG00000024513-9990.000Aotus_nancymaae
ENSOCUG00000016174PABPN19268.750ENSACLG00000016374pabpn16680.402Astatotilapia_calliptera
ENSOCUG00000016174PABPN19571.756ENSAMXG00000000452pabpn19483.333Astyanax_mexicanus
ENSOCUG00000016174PABPN17286.735ENSBTAG00000050594-8785.849Bos_taurus
ENSOCUG00000016174PABPN17097.382ENSBTAG00000053753-7197.382Bos_taurus
ENSOCUG00000016174PABPN110096.711ENSBTAG00000006884PABPN19996.711Bos_taurus
ENSOCUG00000016174PABPN15359.589WBGene00003904pabp-29352.792Caenorhabditis_elegans
ENSOCUG00000016174PABPN16597.191ENSCJAG00000004407-8997.191Callithrix_jacchus
ENSOCUG00000016174PABPN110096.711ENSCJAG00000007960-9996.711Callithrix_jacchus
ENSOCUG00000016174PABPN110094.079ENSCAFG00000011482PABPN19994.079Canis_familiaris
ENSOCUG00000016174PABPN110096.711ENSCAFG00020007298-9996.711Canis_lupus_dingo
ENSOCUG00000016174PABPN110096.711ENSCAFG00020006651-9996.711Canis_lupus_dingo
ENSOCUG00000016174PABPN110097.039ENSCHIG00000012184PABPN19997.039Capra_hircus
ENSOCUG00000016174PABPN16998.942ENSTSYG00000033996BCL2L2-PABPN110098.876Carlito_syrichta
ENSOCUG00000016174PABPN15199.275ENSCAPG00000009461-9999.275Cavia_aperea
ENSOCUG00000016174PABPN110096.382ENSCPOG00000025574PABPN19996.382Cavia_porcellus
ENSOCUG00000016174PABPN110096.711ENSCCAG00000033954BCL2L2-PABPN19996.711Cebus_capucinus
ENSOCUG00000016174PABPN110096.711ENSCATG00000038536BCL2L2-PABPN19996.711Cercocebus_atys
ENSOCUG00000016174PABPN17579.512ENSCLAG00000012423PABPN16279.512Chinchilla_lanigera
ENSOCUG00000016174PABPN17597.073ENSCSAG00000016036PABPN16996.698Chlorocebus_sabaeus
ENSOCUG00000016174PABPN17587.317ENSCHOG00000004798BCL2L2-PABPN18887.317Choloepus_hoffmanni
ENSOCUG00000016174PABPN16192.216ENSCPBG00000026060-9492.216Chrysemys_picta_bellii
ENSOCUG00000016174PABPN17659.420ENSCING00000012468-8066.492Ciona_intestinalis
ENSOCUG00000016174PABPN16560.112ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSOCUG00000016174PABPN16998.942ENSCANG00000009750BCL2L2-PABPN110098.876Colobus_angolensis_palliatus
ENSOCUG00000016174PABPN19780.756ENSCANG00000030980-7483.902Colobus_angolensis_palliatus
ENSOCUG00000016174PABPN110097.333ENSCGRG00001019696Pabpn110098.315Cricetulus_griseus_chok1gshd
ENSOCUG00000016174PABPN16598.315ENSCGRG00000011102Pabpn110098.315Cricetulus_griseus_crigri
ENSOCUG00000016174PABPN18769.710ENSCSEG00000008774pabpn18980.000Cynoglossus_semilaevis
ENSOCUG00000016174PABPN19567.681ENSCVAG00000003152pabpn18680.583Cyprinodon_variegatus
ENSOCUG00000016174PABPN15360.959ENSDARG00000087996pabpn1l7267.227Danio_rerio
ENSOCUG00000016174PABPN17682.775ENSDARG00000045373pabpn18683.010Danio_rerio
ENSOCUG00000016174PABPN110096.711ENSDNOG00000023682PABPN19996.711Dasypus_novemcinctus
ENSOCUG00000016174PABPN110096.711ENSDORG00000028966-9996.711Dipodomys_ordii
ENSOCUG00000016174PABPN17859.434FBgn0005648Pabp28262.827Drosophila_melanogaster
ENSOCUG00000016174PABPN17178.462ENSEBUG00000002322pabpn18378.866Eptatretus_burgeri
ENSOCUG00000016174PABPN110096.711ENSEASG00005011716PABPN19996.711Equus_asinus_asinus
ENSOCUG00000016174PABPN19996.358ENSECAG00000011652PABPN19996.575Equus_caballus
ENSOCUG00000016174PABPN19384.155ENSEEUG00000012973-7292.453Erinaceus_europaeus
ENSOCUG00000016174PABPN19573.462ENSELUG00000022654pabpn18584.951Esox_lucius
ENSOCUG00000016174PABPN110096.711ENSFCAG00000031922PABPN19996.711Felis_catus
ENSOCUG00000016174PABPN16598.876ENSFDAG00000018381BCL2L2-PABPN110098.876Fukomys_damarensis
ENSOCUG00000016174PABPN19566.160ENSFHEG00000007215pabpn18679.612Fundulus_heteroclitus
ENSOCUG00000016174PABPN17283.249ENSGMOG00000003922pabpn16683.505Gadus_morhua
ENSOCUG00000016174PABPN17188.832ENSGALG00000052930-6089.806Gallus_gallus
ENSOCUG00000016174PABPN19570.076ENSGAFG00000017099pabpn18681.643Gambusia_affinis
ENSOCUG00000016174PABPN19567.273ENSGACG00000002167pabpn18777.523Gasterosteus_aculeatus
ENSOCUG00000016174PABPN110096.711ENSGGOG00000022683-9996.711Gorilla_gorilla
ENSOCUG00000016174PABPN19380.714ENSGGOG00000025919-9883.108Gorilla_gorilla
ENSOCUG00000016174PABPN19374.113ENSGGOG00000039675-7382.653Gorilla_gorilla
ENSOCUG00000016174PABPN19570.611ENSHBUG00000019523pabpn18682.039Haplochromis_burtoni
ENSOCUG00000016174PABPN110096.382ENSHGLG00000002927-9996.382Heterocephalus_glaber_female
ENSOCUG00000016174PABPN19576.426ENSHGLG00000018588-7181.517Heterocephalus_glaber_female
ENSOCUG00000016174PABPN16176.048ENSHGLG00000009842-9376.048Heterocephalus_glaber_female
ENSOCUG00000016174PABPN16188.304ENSHGLG00100018935-9488.304Heterocephalus_glaber_male
ENSOCUG00000016174PABPN16599.438ENSHGLG00100006673-10099.438Heterocephalus_glaber_male
ENSOCUG00000016174PABPN19572.481ENSHGLG00100015565-7381.517Heterocephalus_glaber_male
ENSOCUG00000016174PABPN19567.050ENSHCOG00000004655pabpn18681.068Hippocampus_comes
ENSOCUG00000016174PABPN19570.992ENSIPUG00000008085PABPN18682.524Ictalurus_punctatus
ENSOCUG00000016174PABPN17280.808ENSIPUG00000000180-8680.808Ictalurus_punctatus
ENSOCUG00000016174PABPN16598.876ENSSTOG00000029847BCL2L2-PABPN110098.876Ictidomys_tridecemlineatus
ENSOCUG00000016174PABPN16598.876ENSJJAG00000023507Gm2052110098.876Jaculus_jaculus
ENSOCUG00000016174PABPN17680.952ENSKMAG00000018748pabpn18681.159Kryptolebias_marmoratus
ENSOCUG00000016174PABPN19570.611ENSLBEG00000027266pabpn18682.039Labrus_bergylta
ENSOCUG00000016174PABPN16587.079ENSLACG00000000646pabpn17988.889Latimeria_chalumnae
ENSOCUG00000016174PABPN19070.445ENSLOCG00000000796pabpn16983.505Lepisosteus_oculatus
ENSOCUG00000016174PABPN17664.762ENSLOCG00000004694pabpn1l9565.217Lepisosteus_oculatus
ENSOCUG00000016174PABPN15598.013ENSLAFG00000031227-10098.013Loxodonta_africana
ENSOCUG00000016174PABPN16998.942ENSMFAG00000032183BCL2L2-PABPN110098.876Macaca_fascicularis
ENSOCUG00000016174PABPN15291.489ENSMFAG00000031355-9991.489Macaca_fascicularis
ENSOCUG00000016174PABPN16998.942ENSMMUG00000014747BCL2L2-PABPN110098.630Macaca_mulatta
ENSOCUG00000016174PABPN19773.244ENSMMUG00000048382-6881.863Macaca_mulatta
ENSOCUG00000016174PABPN110096.711ENSMNEG00000045065BCL2L2-PABPN19996.711Macaca_nemestrina
ENSOCUG00000016174PABPN19764.407ENSMNEG00000035750-9991.489Macaca_nemestrina
ENSOCUG00000016174PABPN19772.260ENSMLEG00000034623-9989.362Mandrillus_leucophaeus
ENSOCUG00000016174PABPN16998.942ENSMLEG00000043862BCL2L2-PABPN110098.876Mandrillus_leucophaeus
ENSOCUG00000016174PABPN19070.400ENSMAMG00000007979pabpn16881.281Mastacembelus_armatus
ENSOCUG00000016174PABPN19069.721ENSMZEG00005011904pabpn16681.959Maylandia_zebra
ENSOCUG00000016174PABPN19997.306ENSMAUG00000007383Gm205219997.306Mesocricetus_auratus
ENSOCUG00000016174PABPN110097.039ENSMICG00000010002BCL2L2-PABPN19997.039Microcebus_murinus
ENSOCUG00000016174PABPN110097.000ENSMOCG00000018557Gm205219997.000Microtus_ochrogaster
ENSOCUG00000016174PABPN19570.992ENSMMOG00000005405pabpn18682.524Mola_mola
ENSOCUG00000016174PABPN17695.673ENSMODG00000004535-6995.215Monodelphis_domestica
ENSOCUG00000016174PABPN19069.721ENSMALG00000019612pabpn16781.281Monopterus_albus
ENSOCUG00000016174PABPN16997.884MGP_CAROLIEiJ_G0019276Gm205215797.884Mus_caroli
ENSOCUG00000016174PABPN110097.000MGP_CAROLIEiJ_G0019277Pabpn110097.753Mus_caroli
ENSOCUG00000016174PABPN16998.413ENSMUSG00000092232Gm205215798.413Mus_musculus
ENSOCUG00000016174PABPN110097.333ENSMUSG00000022194Pabpn110098.315Mus_musculus
ENSOCUG00000016174PABPN110097.333MGP_PahariEiJ_G0030295Pabpn110098.315Mus_pahari
ENSOCUG00000016174PABPN16998.413MGP_PahariEiJ_G0030294Gm205215798.413Mus_pahari
ENSOCUG00000016174PABPN110097.333MGP_SPRETEiJ_G0020166Pabpn110098.315Mus_spretus
ENSOCUG00000016174PABPN16998.413MGP_SPRETEiJ_G0020165Gm205215798.413Mus_spretus
ENSOCUG00000016174PABPN16198.795ENSMPUG00000006775-9998.795Mustela_putorius_furo
ENSOCUG00000016174PABPN19385.563ENSMLUG00000012452-7091.589Myotis_lucifugus
ENSOCUG00000016174PABPN19579.021ENSMLUG00000028677-7593.171Myotis_lucifugus
ENSOCUG00000016174PABPN16996.825ENSMLUG00000003800-10096.825Myotis_lucifugus
ENSOCUG00000016174PABPN16998.942ENSNGAG00000019529Gm205215798.942Nannospalax_galili
ENSOCUG00000016174PABPN19069.721ENSNBRG00000023955pabpn19481.548Neolamprologus_brichardi
ENSOCUG00000016174PABPN19773.630ENSNLEG00000030598-7981.132Nomascus_leucogenys
ENSOCUG00000016174PABPN15472.297ENSNLEG00000035292-9972.297Nomascus_leucogenys
ENSOCUG00000016174PABPN17798.578ENSNLEG00000015007-7598.113Nomascus_leucogenys
ENSOCUG00000016174PABPN16595.385ENSOPRG00000016461PABPN16795.385Ochotona_princeps
ENSOCUG00000016174PABPN16587.079ENSODEG00000011555-8986.826Octodon_degus
ENSOCUG00000016174PABPN19283.032ENSODEG00000003739-7585.520Octodon_degus
ENSOCUG00000016174PABPN110096.382ENSODEG00000002083BCL2L2-PABPN19996.382Octodon_degus
ENSOCUG00000016174PABPN19069.721ENSONIG00000008112pabpn16681.959Oreochromis_niloticus
ENSOCUG00000016174PABPN15395.205ENSOANG00000009218-10095.205Ornithorhynchus_anatinus
ENSOCUG00000016174PABPN17282.234ENSORLG00000027900pabpn18479.412Oryzias_latipes
ENSOCUG00000016174PABPN16883.957ENSORLG00020004681pabpn16781.773Oryzias_latipes_hni
ENSOCUG00000016174PABPN17682.297ENSORLG00015000018pabpn18682.524Oryzias_latipes_hsok
ENSOCUG00000016174PABPN17678.744ENSOMEG00000016618pabpn17278.922Oryzias_melastigma
ENSOCUG00000016174PABPN110096.711ENSOGAG00000008710PABPN19996.711Otolemur_garnettii
ENSOCUG00000016174PABPN16998.942ENSOARG00000019336BCL2L2-PABPN15298.942Ovis_aries
ENSOCUG00000016174PABPN16998.942ENSPPAG00000028984BCL2L2-PABPN19998.795Pan_paniscus
ENSOCUG00000016174PABPN16182.036ENSPPAG00000039421-9382.036Pan_paniscus
ENSOCUG00000016174PABPN110096.711ENSPPRG00000010567PABPN19996.711Panthera_pardus
ENSOCUG00000016174PABPN16598.876ENSPTIG00000001063BCL2L2-PABPN110098.876Panthera_tigris_altaica
ENSOCUG00000016174PABPN19571.429ENSPTRG00000047273-7381.633Pan_troglodytes
ENSOCUG00000016174PABPN110096.711ENSPTRG00000006167BCL2L29996.711Pan_troglodytes
ENSOCUG00000016174PABPN19776.712ENSPANG00000023326-9991.489Papio_anubis
ENSOCUG00000016174PABPN110096.711ENSPANG00000021100BCL2L2-PABPN19996.711Papio_anubis
ENSOCUG00000016174PABPN17263.636ENSPKIG00000008340pabpn1l9263.636Paramormyrops_kingsleyae
ENSOCUG00000016174PABPN16985.263ENSPKIG00000008144-6781.773Paramormyrops_kingsleyae
ENSOCUG00000016174PABPN17681.340ENSPKIG00000018052pabpn18682.039Paramormyrops_kingsleyae
ENSOCUG00000016174PABPN19069.323ENSPMGG00000022027pabpn16981.443Periophthalmus_magnuspinnatus
ENSOCUG00000016174PABPN110097.333ENSPEMG00000008332Gm205219997.333Peromyscus_maniculatus_bairdii
ENSOCUG00000016174PABPN16077.778ENSPMAG00000006212pabpn18476.355Petromyzon_marinus
ENSOCUG00000016174PABPN17796.209ENSPCIG00000027751-6995.755Phascolarctos_cinereus
ENSOCUG00000016174PABPN19567.424ENSPFOG00000010351pabpn18680.193Poecilia_formosa
ENSOCUG00000016174PABPN19069.048ENSPLAG00000022696pabpn16880.392Poecilia_latipinna
ENSOCUG00000016174PABPN19567.424ENSPMEG00000020856pabpn18680.193Poecilia_mexicana
ENSOCUG00000016174PABPN19567.803ENSPREG00000011278pabpn18680.676Poecilia_reticulata
ENSOCUG00000016174PABPN18689.695ENSPPYG00000005663PABPN17198.000Pongo_abelii
ENSOCUG00000016174PABPN17383.500ENSPCAG00000005902PABPN16883.085Procavia_capensis
ENSOCUG00000016174PABPN110097.039ENSPCOG00000028047BCL2L2-PABPN19997.039Propithecus_coquereli
ENSOCUG00000016174PABPN17794.787ENSPVAG00000005270PABPN16796.078Pteropus_vampyrus
ENSOCUG00000016174PABPN19570.611ENSPNYG00000013182pabpn18682.039Pundamilia_nyererei
ENSOCUG00000016174PABPN19571.756ENSPNAG00000023526pabpn18683.495Pygocentrus_nattereri
ENSOCUG00000016174PABPN17363.500ENSPNAG00000021666pabpn1l9465.174Pygocentrus_nattereri
ENSOCUG00000016174PABPN110097.667ENSRNOG00000042195Pabpn19997.667Rattus_norvegicus
ENSOCUG00000016174PABPN19879.932ENSRBIG00000039547-7585.366Rhinopithecus_bieti
ENSOCUG00000016174PABPN16598.870ENSRBIG00000040762BCL2L2-PABPN15598.870Rhinopithecus_bieti
ENSOCUG00000016174PABPN17985.253ENSRBIG00000042811-8884.906Rhinopithecus_bieti
ENSOCUG00000016174PABPN19976.645ENSRROG00000040409-7585.854Rhinopithecus_roxellana
ENSOCUG00000016174PABPN17781.043ENSRROG00000036409-6580.660Rhinopithecus_roxellana
ENSOCUG00000016174PABPN16598.876ENSRROG00000045535BCL2L2-PABPN110098.876Rhinopithecus_roxellana
ENSOCUG00000016174PABPN16992.574ENSSBOG00000026930BCL2L2-PABPN19998.795Saimiri_boliviensis_boliviensis
ENSOCUG00000016174PABPN18086.239ENSSHAG00000014841-8796.296Sarcophilus_harrisii
ENSOCUG00000016174PABPN19664.751ENSSHAG00000007707-9072.642Sarcophilus_harrisii
ENSOCUG00000016174PABPN17977.376ENSSFOG00015012565pabpn19081.068Scleropages_formosus
ENSOCUG00000016174PABPN19569.847ENSSFOG00015014718pabpn18681.553Scleropages_formosus
ENSOCUG00000016174PABPN17958.605ENSSFOG00015015833pabpn1l8764.433Scleropages_formosus
ENSOCUG00000016174PABPN19570.611ENSSMAG00000020157pabpn18682.039Scophthalmus_maximus
ENSOCUG00000016174PABPN19069.721ENSSDUG00000020582pabpn16781.281Seriola_dumerili
ENSOCUG00000016174PABPN19570.611ENSSLDG00000007118pabpn18682.039Seriola_lalandi_dorsalis
ENSOCUG00000016174PABPN16191.018ENSSPUG00000018308-9491.018Sphenodon_punctatus
ENSOCUG00000016174PABPN19570.611ENSSPAG00000021658pabpn18682.039Stegastes_partitus
ENSOCUG00000016174PABPN110096.711ENSSSCG00000002023PABPN19996.711Sus_scrofa
ENSOCUG00000016174PABPN19365.000ENSSSCG00000034805-7668.137Sus_scrofa
ENSOCUG00000016174PABPN16455.114ENSSSCG00000038472-9154.491Sus_scrofa
ENSOCUG00000016174PABPN19570.722ENSTRUG00000023664pabpn18682.524Takifugu_rubripes
ENSOCUG00000016174PABPN17679.048ENSTNIG00000005369pabpn19379.227Tetraodon_nigroviridis
ENSOCUG00000016174PABPN110096.053ENSUAMG00000024460PABPN19996.053Ursus_americanus
ENSOCUG00000016174PABPN16998.942ENSUMAG00000014288BCL2L2-PABPN15798.942Ursus_maritimus
ENSOCUG00000016174PABPN16998.942ENSVVUG00000019912BCL2L2-PABPN17796.923Vulpes_vulpes
ENSOCUG00000016174PABPN17289.286ENSXETG00000014597pabpn16691.878Xenopus_tropicalis
ENSOCUG00000016174PABPN16468.362ENSXCOG00000005158pabpn18980.921Xiphophorus_couchianus
ENSOCUG00000016174PABPN19568.182ENSXMAG00000006196pabpn18681.159Xiphophorus_maculatus

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