EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOCUG00000016438 (Gene tree)
Gene ID
100343480
Gene Symbol
CSDE1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Oryctolagus_cuniculus
Status
putative
Strand
Plus strand
Length
32526 bases
Position
chr13:49440983-49473508
Accession
100343480
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOCUP00000014135CSDPF00313.224.7e-8415
ENSOCUP00000014135CSDPF00313.224.7e-8425
ENSOCUP00000014135CSDPF00313.224.7e-8435
ENSOCUP00000014135CSDPF00313.224.7e-8445
ENSOCUP00000014135CSDPF00313.224.7e-8455
ENSOCUP00000010291CSDPF00313.225.8e-8415
ENSOCUP00000010291CSDPF00313.225.8e-8425
ENSOCUP00000010291CSDPF00313.225.8e-8435
ENSOCUP00000010291CSDPF00313.225.8e-8445
ENSOCUP00000010291CSDPF00313.225.8e-8455
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOCUT00000011966CSDE1-2012926XM_002715744ENSOCUP00000010291844 (aa)XP_002715790G1T2C3
ENSOCUT00000016444CSDE1-2022442-ENSOCUP00000014135814 (aa)-G1TBN0
Gene Model
Click here to download ENSOCUG00000016438's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000016438's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOCUG00000016438CSDE110098.104ENSG00000009307CSDE1100100.000Homo_sapiens
ENSOCUG00000016438CSDE19873.709ENSAPOG00000015538csde110077.273Acanthochromis_polyacanthus
ENSOCUG00000016438CSDE110093.373ENSAMEG00000017129CSDE110093.373Ailuropoda_melanoleuca
ENSOCUG00000016438CSDE18676.486ENSACIG00000015175csde110076.486Amphilophus_citrinellus
ENSOCUG00000016438CSDE19973.666ENSAOCG00000011510csde110077.403Amphiprion_ocellaris
ENSOCUG00000016438CSDE19975.326ENSAPEG00000007194csde110077.403Amphiprion_percula
ENSOCUG00000016438CSDE19477.013ENSATEG00000003864csde110077.013Anabas_testudineus
ENSOCUG00000016438CSDE19491.525ENSAPLG00000008797CSDE110091.525Anas_platyrhynchos
ENSOCUG00000016438CSDE19591.729ENSACAG00000003120CSDE110091.729Anolis_carolinensis
ENSOCUG00000016438CSDE110097.749ENSANAG00000024665CSDE110097.749Aotus_nancymaae
ENSOCUG00000016438CSDE18772.340ENSANAG00000028396-9173.129Aotus_nancymaae
ENSOCUG00000016438CSDE19576.625ENSACLG00000013296csde110076.983Astatotilapia_calliptera
ENSOCUG00000016438CSDE19477.302ENSAMXG00000007436csde110077.302Astyanax_mexicanus
ENSOCUG00000016438CSDE110097.986ENSBTAG00000000678CSDE110098.305Bos_taurus
ENSOCUG00000016438CSDE110097.867ENSCJAG00000012565CSDE110097.867Callithrix_jacchus
ENSOCUG00000016438CSDE19894.451ENSCAFG00000009618CSDE110094.451Canis_familiaris
ENSOCUG00000016438CSDE19498.566ENSCAFG00020000481CSDE110098.566Canis_lupus_dingo
ENSOCUG00000016438CSDE110097.867ENSCHIG00000017250CSDE110098.305Capra_hircus
ENSOCUG00000016438CSDE110097.393ENSTSYG00000003747CSDE110098.441Carlito_syrichta
ENSOCUG00000016438CSDE19591.228ENSCAPG00000015128CSDE110091.228Cavia_aperea
ENSOCUG00000016438CSDE19592.857ENSCPOG00000040388CSDE110092.857Cavia_porcellus
ENSOCUG00000016438CSDE19173.719ENSCCAG00000030878-9173.719Cebus_capucinus
ENSOCUG00000016438CSDE19075.990ENSCCAG00000033677-9975.534Cebus_capucinus
ENSOCUG00000016438CSDE110097.867ENSCCAG00000036794CSDE110098.371Cebus_capucinus
ENSOCUG00000016438CSDE110098.104ENSCATG00000036962CSDE110098.104Cercocebus_atys
ENSOCUG00000016438CSDE19597.995ENSCLAG00000006618CSDE110097.995Chinchilla_lanigera
ENSOCUG00000016438CSDE110098.104ENSCSAG00000001658CSDE110098.104Chlorocebus_sabaeus
ENSOCUG00000016438CSDE110098.160ENSCHOG00000000918CSDE19198.160Choloepus_hoffmanni
ENSOCUG00000016438CSDE19592.105ENSCPBG00000016547CSDE110092.105Chrysemys_picta_bellii
ENSOCUG00000016438CSDE19243.154ENSCING00000014465-9643.154Ciona_intestinalis
ENSOCUG00000016438CSDE19142.875ENSCSAVG00000008100-9842.627Ciona_savignyi
ENSOCUG00000016438CSDE110097.986ENSCANG00000035096CSDE110097.986Colobus_angolensis_palliatus
ENSOCUG00000016438CSDE19492.449ENSCANG00000031069-9992.449Colobus_angolensis_palliatus
ENSOCUG00000016438CSDE19480.574ENSCGRG00001014011-10080.574Cricetulus_griseus_chok1gshd
ENSOCUG00000016438CSDE19597.870ENSCGRG00001016833-10097.870Cricetulus_griseus_chok1gshd
ENSOCUG00000016438CSDE19297.996ENSCGRG00000002225-10097.996Cricetulus_griseus_crigri
ENSOCUG00000016438CSDE19483.478ENSCGRG00000005831-10083.478Cricetulus_griseus_crigri
ENSOCUG00000016438CSDE19476.853ENSCSEG00000002620csde110076.853Cynoglossus_semilaevis
ENSOCUG00000016438CSDE19975.059ENSCVAG00000001344csde110076.364Cyprinodon_variegatus
ENSOCUG00000016438CSDE19578.027ENSDARG00000074758csde110078.027Danio_rerio
ENSOCUG00000016438CSDE19996.552ENSDNOG00000010287-9896.552Dasypus_novemcinctus
ENSOCUG00000016438CSDE17569.962ENSDNOG00000034464-10073.043Dasypus_novemcinctus
ENSOCUG00000016438CSDE19597.368ENSDORG00000011609Csde110097.455Dipodomys_ordii
ENSOCUG00000016438CSDE19148.367FBgn0263352Unr7347.992Drosophila_melanogaster
ENSOCUG00000016438CSDE18587.025ENSETEG00000006280-10087.025Echinops_telfairi
ENSOCUG00000016438CSDE17468.377ENSETEG00000007109-9968.377Echinops_telfairi
ENSOCUG00000016438CSDE19476.632ENSETEG00000013678-9976.632Echinops_telfairi
ENSOCUG00000016438CSDE19497.521ENSETEG00000002491-8097.521Echinops_telfairi
ENSOCUG00000016438CSDE19455.897ENSEBUG00000008647csde19954.167Eptatretus_burgeri
ENSOCUG00000016438CSDE110093.602ENSEASG00005006284CSDE110098.371Equus_asinus_asinus
ENSOCUG00000016438CSDE110093.602ENSECAG00000020885CSDE110098.371Equus_caballus
ENSOCUG00000016438CSDE19398.953ENSEEUG00000006286CSDE17098.953Erinaceus_europaeus
ENSOCUG00000016438CSDE19872.558ENSELUG00000015507csde110075.809Esox_lucius
ENSOCUG00000016438CSDE110098.460ENSFCAG00000029266CSDE110098.827Felis_catus
ENSOCUG00000016438CSDE19591.353ENSFALG00000003407CSDE110091.353Ficedula_albicollis
ENSOCUG00000016438CSDE19597.995ENSFDAG00000007882CSDE110098.054Fukomys_damarensis
ENSOCUG00000016438CSDE19874.614ENSFHEG00000010799csde110076.404Fundulus_heteroclitus
ENSOCUG00000016438CSDE19476.095ENSGMOG00000012731csde110076.095Gadus_morhua
ENSOCUG00000016438CSDE19391.560ENSGALG00000002139CSDE19891.560Gallus_gallus
ENSOCUG00000016438CSDE18776.067ENSGAFG00000005241csde19576.067Gambusia_affinis
ENSOCUG00000016438CSDE19477.250ENSGACG00000004544csde110077.250Gasterosteus_aculeatus
ENSOCUG00000016438CSDE19691.728ENSGAGG00000017685CSDE110091.729Gopherus_agassizii
ENSOCUG00000016438CSDE110098.104ENSGGOG00000002164CSDE110098.566Gorilla_gorilla
ENSOCUG00000016438CSDE19974.528ENSHBUG00000020315csde110076.983Haplochromis_burtoni
ENSOCUG00000016438CSDE19581.704ENSHGLG00000019549-10081.704Heterocephalus_glaber_female
ENSOCUG00000016438CSDE19488.657ENSHGLG00000003829-10088.657Heterocephalus_glaber_female
ENSOCUG00000016438CSDE19488.554ENSHGLG00000008555-10088.623Heterocephalus_glaber_female
ENSOCUG00000016438CSDE19385.020ENSHGLG00000007471-9885.020Heterocephalus_glaber_female
ENSOCUG00000016438CSDE19479.674ENSHGLG00000000650-9979.674Heterocephalus_glaber_female
ENSOCUG00000016438CSDE19189.532ENSHGLG00000010039-10089.532Heterocephalus_glaber_female
ENSOCUG00000016438CSDE19588.596ENSHGLG00000009620-10088.847Heterocephalus_glaber_female
ENSOCUG00000016438CSDE19484.094ENSHGLG00100012072-10084.094Heterocephalus_glaber_male
ENSOCUG00000016438CSDE19382.523ENSHGLG00100007287-9882.523Heterocephalus_glaber_male
ENSOCUG00000016438CSDE19479.557ENSHGLG00100001846-10079.557Heterocephalus_glaber_male
ENSOCUG00000016438CSDE19381.737ENSHGLG00100004833-10081.737Heterocephalus_glaber_male
ENSOCUG00000016438CSDE19598.246ENSHGLG00100019438-10098.246Heterocephalus_glaber_male
ENSOCUG00000016438CSDE19483.980ENSHGLG00100002245-9983.980Heterocephalus_glaber_male
ENSOCUG00000016438CSDE18883.543ENSHGLG00100004195-10083.543Heterocephalus_glaber_male
ENSOCUG00000016438CSDE19189.310ENSHGLG00100006910-10089.310Heterocephalus_glaber_male
ENSOCUG00000016438CSDE19875.151ENSHCOG00000004158csde110076.203Hippocampus_comes
ENSOCUG00000016438CSDE19476.913ENSIPUG00000000355csde110076.913Ictalurus_punctatus
ENSOCUG00000016438CSDE19275.403ENSSTOG00000032722-9881.653Ictidomys_tridecemlineatus
ENSOCUG00000016438CSDE19579.404ENSSTOG00000030994-10079.923Ictidomys_tridecemlineatus
ENSOCUG00000016438CSDE19597.619ENSJJAG00000019571Csde110097.619Jaculus_jaculus
ENSOCUG00000016438CSDE19975.059ENSKMAG00000005685csde110075.896Kryptolebias_marmoratus
ENSOCUG00000016438CSDE19873.709ENSLBEG00000014770csde110077.273Labrus_bergylta
ENSOCUG00000016438CSDE19778.718ENSLACG00000018452CSDE19678.806Latimeria_chalumnae
ENSOCUG00000016438CSDE110077.518ENSLOCG00000010413csde19679.828Lepisosteus_oculatus
ENSOCUG00000016438CSDE19897.121ENSLAFG00000007150CSDE110097.121Loxodonta_africana
ENSOCUG00000016438CSDE110098.104ENSMFAG00000003674CSDE110098.566Macaca_fascicularis
ENSOCUG00000016438CSDE110098.104ENSMMUG00000001974CSDE110098.566Macaca_mulatta
ENSOCUG00000016438CSDE110098.104ENSMNEG00000045247CSDE110098.104Macaca_nemestrina
ENSOCUG00000016438CSDE110097.867ENSMLEG00000038673CSDE110097.867Mandrillus_leucophaeus
ENSOCUG00000016438CSDE19973.624ENSMAMG00000008821csde110078.052Mastacembelus_armatus
ENSOCUG00000016438CSDE19975.118ENSMZEG00005021675csde110076.983Maylandia_zebra
ENSOCUG00000016438CSDE19491.276ENSMGAG00000016381CSDE110091.276Meleagris_gallopavo
ENSOCUG00000016438CSDE19597.870ENSMAUG00000014031Csde110097.904Mesocricetus_auratus
ENSOCUG00000016438CSDE110097.512ENSMICG00000002050CSDE110097.512Microcebus_murinus
ENSOCUG00000016438CSDE19597.870ENSMOCG00000018960Csde110097.870Microtus_ochrogaster
ENSOCUG00000016438CSDE19477.273ENSMMOG00000015075csde110077.273Mola_mola
ENSOCUG00000016438CSDE19993.390ENSMODG00000004685CSDE110095.614Monodelphis_domestica
ENSOCUG00000016438CSDE19477.532ENSMALG00000007132csde110077.532Monopterus_albus
ENSOCUG00000016438CSDE19597.619MGP_CAROLIEiJ_G0025444Csde110097.619Mus_caroli
ENSOCUG00000016438CSDE19597.744ENSMUSG00000068823Csde110097.754Mus_musculus
ENSOCUG00000016438CSDE19597.995MGP_PahariEiJ_G0026888Csde110097.995Mus_pahari
ENSOCUG00000016438CSDE19597.995MGP_SPRETEiJ_G0026394Csde110097.995Mus_spretus
ENSOCUG00000016438CSDE19398.851ENSMPUG00000005753CSDE19998.851Mustela_putorius_furo
ENSOCUG00000016438CSDE110093.602ENSMLUG00000005681CSDE110093.602Myotis_lucifugus
ENSOCUG00000016438CSDE19170.379ENSNGAG00000012599-10070.379Nannospalax_galili
ENSOCUG00000016438CSDE19597.744ENSNGAG00000021929Csde110097.754Nannospalax_galili
ENSOCUG00000016438CSDE19476.983ENSNBRG00000020808csde110076.983Neolamprologus_brichardi
ENSOCUG00000016438CSDE110097.986ENSNLEG00000004842CSDE110097.986Nomascus_leucogenys
ENSOCUG00000016438CSDE19396.117ENSMEUG00000002677CSDE19696.117Notamacropus_eugenii
ENSOCUG00000016438CSDE19895.302ENSOPRG00000005002CSDE18295.302Ochotona_princeps
ENSOCUG00000016438CSDE19167.478ENSODEG00000005979-9867.478Octodon_degus
ENSOCUG00000016438CSDE19597.744ENSODEG00000007383-10097.754Octodon_degus
ENSOCUG00000016438CSDE19574.847ENSONIG00000009309csde110074.847Oreochromis_niloticus
ENSOCUG00000016438CSDE19579.551ENSOANG00000003346-10079.551Ornithorhynchus_anatinus
ENSOCUG00000016438CSDE19973.095ENSORLG00000000707csde110077.243Oryzias_latipes
ENSOCUG00000016438CSDE19975.268ENSORLG00020005148csde110074.969Oryzias_latipes_hni
ENSOCUG00000016438CSDE19975.268ENSORLG00015019415csde110077.243Oryzias_latipes_hsok
ENSOCUG00000016438CSDE19875.659ENSOMEG00000015656csde110077.922Oryzias_melastigma
ENSOCUG00000016438CSDE110094.194ENSOGAG00000012127CSDE110094.194Otolemur_garnettii
ENSOCUG00000016438CSDE110094.313ENSOARG00000020034CSDE110094.313Ovis_aries
ENSOCUG00000016438CSDE110098.104ENSPPAG00000025861CSDE110098.566Pan_paniscus
ENSOCUG00000016438CSDE110098.460ENSPPRG00000006747CSDE110098.460Panthera_pardus
ENSOCUG00000016438CSDE110098.460ENSPTIG00000015468CSDE110098.872Panthera_tigris_altaica
ENSOCUG00000016438CSDE110097.986ENSPTRG00000033721CSDE110098.622Pan_troglodytes
ENSOCUG00000016438CSDE110098.104ENSPANG00000018873CSDE110098.566Papio_anubis
ENSOCUG00000016438CSDE19476.593ENSPKIG00000009459csde110076.593Paramormyrops_kingsleyae
ENSOCUG00000016438CSDE19195.133ENSPSIG00000003823CSDE19695.133Pelodiscus_sinensis
ENSOCUG00000016438CSDE19476.883ENSPMGG00000000772csde110076.883Periophthalmus_magnuspinnatus
ENSOCUG00000016438CSDE19597.870ENSPEMG00000020357-10097.904Peromyscus_maniculatus_bairdii
ENSOCUG00000016438CSDE110093.506ENSPCIG00000022587CSDE110095.739Phascolarctos_cinereus
ENSOCUG00000016438CSDE19474.845ENSPFOG00000012664csde110075.311Poecilia_formosa
ENSOCUG00000016438CSDE19270.814ENSPLAG00000017680csde19370.814Poecilia_latipinna
ENSOCUG00000016438CSDE19370.713ENSPMEG00000005094csde19670.713Poecilia_mexicana
ENSOCUG00000016438CSDE19874.940ENSPREG00000011631csde110073.589Poecilia_reticulata
ENSOCUG00000016438CSDE19598.496ENSPPYG00000000996CSDE110098.496Pongo_abelii
ENSOCUG00000016438CSDE110097.940ENSPCAG00000014368CSDE19697.940Procavia_capensis
ENSOCUG00000016438CSDE110098.222ENSPCOG00000017893CSDE110098.435Propithecus_coquereli
ENSOCUG00000016438CSDE18582.836ENSPCOG00000008223-9082.836Propithecus_coquereli
ENSOCUG00000016438CSDE110088.507ENSPVAG00000008225CSDE110088.507Pteropus_vampyrus
ENSOCUG00000016438CSDE19974.528ENSPNYG00000013745csde110076.983Pundamilia_nyererei
ENSOCUG00000016438CSDE19875.447ENSPNAG00000001958csde110077.532Pygocentrus_nattereri
ENSOCUG00000016438CSDE19597.870ENSRNOG00000061058Csde110097.870Rattus_norvegicus
ENSOCUG00000016438CSDE110092.544ENSRBIG00000038966-10092.544Rhinopithecus_bieti
ENSOCUG00000016438CSDE19594.389ENSRBIG00000038088-9997.005Rhinopithecus_bieti
ENSOCUG00000016438CSDE110098.104ENSRROG00000043101CSDE110098.104Rhinopithecus_roxellana
ENSOCUG00000016438CSDE110097.867ENSSBOG00000035592CSDE110097.867Saimiri_boliviensis_boliviensis
ENSOCUG00000016438CSDE19595.071ENSSHAG00000009831CSDE110095.437Sarcophilus_harrisii
ENSOCUG00000016438CSDE19875.210ENSSFOG00015007498csde110076.723Scleropages_formosus
ENSOCUG00000016438CSDE19974.074ENSSMAG00000007203csde110077.792Scophthalmus_maximus
ENSOCUG00000016438CSDE19873.709ENSSDUG00000015380csde110077.273Seriola_dumerili
ENSOCUG00000016438CSDE19876.024ENSSLDG00000008819csde110077.273Seriola_lalandi_dorsalis
ENSOCUG00000016438CSDE110092.426ENSSARG00000000738CSDE110092.426Sorex_araneus
ENSOCUG00000016438CSDE19691.605ENSSPUG00000008714CSDE110091.604Sphenodon_punctatus
ENSOCUG00000016438CSDE19975.563ENSSPAG00000000716csde110077.403Stegastes_partitus
ENSOCUG00000016438CSDE110097.986ENSSSCG00000006752CSDE110098.435Sus_scrofa
ENSOCUG00000016438CSDE19590.375ENSTGUG00000000972CSDE110090.375Taeniopygia_guttata
ENSOCUG00000016438CSDE19474.382ENSTRUG00000007996csde110074.382Takifugu_rubripes
ENSOCUG00000016438CSDE18880.989ENSTNIG00000010878csde110080.989Tetraodon_nigroviridis
ENSOCUG00000016438CSDE19397.436ENSTBEG00000011880-6797.436Tupaia_belangeri
ENSOCUG00000016438CSDE110093.957ENSTTRG00000015583CSDE110093.957Tursiops_truncatus
ENSOCUG00000016438CSDE18494.042ENSUAMG00000024289-9994.042Ursus_americanus
ENSOCUG00000016438CSDE18499.020ENSUAMG00000021779-9998.387Ursus_americanus
ENSOCUG00000016438CSDE19591.097ENSUMAG00000009720-9891.097Ursus_maritimus
ENSOCUG00000016438CSDE19298.812ENSUMAG00000011714-9998.812Ursus_maritimus
ENSOCUG00000016438CSDE110098.122ENSVPAG00000000749CSDE18598.122Vicugna_pacos
ENSOCUG00000016438CSDE18698.538ENSVVUG00000009890CSDE19498.538Vulpes_vulpes
ENSOCUG00000016438CSDE19585.768ENSXETG00000021448csde110085.768Xenopus_tropicalis
ENSOCUG00000016438CSDE18785.455ENSXCOG00000000035csde19985.455Xiphophorus_couchianus
ENSOCUG00000016438CSDE19875.866ENSXMAG00000009080csde19877.321Xiphophorus_maculatus

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